Os04g0527900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Tonoplast membrane integral protein ZmTIP3-2.
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Os04g0527900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Tonoplast membrane integral protein ZmTIP3-2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 248.88 | 0.741 | 3.87 | -0.154 | 0.77 | 2.05 | -0.577 | -4.52 | 0.222 | 12.3 | 1.03 | 12 | -- | -- |
| 255.49 | 0.744 | 3.87 | -0.109 | 0.757 | 1.36 | -0.403 | -- | 0.2 | 12 | 1.166 | 12 | -- | -- |
| 250.26 | 0.737 | 3.87 | -0.174 | 0.776 | 2.06 | -- | -4.19 | 0.221 | 12.3 | 1.03 | 12 | -- | -- |
| 255.83 | 0.745 | 3.85 | -0.138 | 0.786 | 1.44 | -- | -- | 0.22 | 12.1 | 1.134 | 12 | -- | -- |
| 286.32 | 0.788 | 3.88 | -0.172 | -- | 1.97 | -- | -5.16 | 0.21 | -- | 0.8331 | 12 | -- | -- |
| 270.32 | 0.771 | 3.86 | -0.0316 | 0.705 | -- | -0.563 | -- | 0.18 | 11.3 | -- | -- | -- | -- |
| 271.68 | 0.772 | 3.86 | -0.0544 | 0.707 | -- | -- | -- | 0.178 | 11.3 | -- | -- | -- | -- |
| 293.14 | 0.797 | 3.87 | -0.135 | -- | 1.15 | -- | -- | 0.199 | -- | 1.005 | 12 | -- | -- |
| 256.32 | 0.746 | 3.85 | -- | 0.785 | 1.41 | -- | -- | 0.228 | 12.1 | 1.124 | 12 | -- | -- |
| 302.97 | 0.813 | 3.87 | -0.0722 | -- | -- | -- | -- | 0.171 | -- | -- | -- | -- | -- |
| 271.76 | 0.771 | 3.86 | -- | 0.708 | -- | -- | -- | 0.184 | 11.3 | -- | -- | -- | -- |
| 293.61 | 0.798 | 3.87 | -- | -- | 1.13 | -- | -- | 0.213 | -- | 1 | 12 | -- | -- |
| 303.11 | 0.813 | 3.87 | -- | -- | -- | -- | -- | 0.179 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 241.93 | wind | 1 | 30 | < th | dose independent | rect. | 5 | 21 |
| 3 | 244.49 | wind | 1 | 10 | < th | dose dependent | rect. | 5 | 21 |
| 12 | 247.98 | wind | 1 | 30 | < th | dose independent | rect. | 5 | 2 |
| 13 | 248.76 | wind | 1 | 30 | < th | dose dependent | rect. | 1 | 9 |
| 15 | 248.98 | wind | 1 | 30 | < th | dose dependent | rect. | 1 | 12 |
| 17 | 249.00 | wind | 1 | 30 | < th | dose independent | rect. | 1 | 9 |
| 23 | 249.20 | wind | 1 | 30 | < th | dose independent | rect. | 5 | 5 |
| 42 | 249.69 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 22 |
| 62 | 250.01 | wind | 1 | 30 | < th | dose independent | rect. | 1 | 6 |
| 63 | 250.03 | wind | 1 | 30 | < th | dose dependent | rect. | 1 | 6 |
| 64 | 250.05 | wind | 1 | 30 | < th | dose dependent | rect. | 5 | 1 |
| 65 | 250.06 | wind | 1 | 30 | < th | dose independent | rect. | 9 | 22 |
| 71 | 250.21 | wind | 1 | 10 | < th | dose dependent | rect. | 22 | 17 |
| 79 | 250.22 | wind | 1 | 10 | < th | dose dependent | rect. | 13 | 21 |
| 86 | 250.28 | wind | 1 | 10 | < th | dose dependent | no | NA | NA |
| 131 | 250.45 | wind | 1 | 10 | < th | dose dependent | rect. | 22 | 12 |
| 164 | 250.58 | wind | 1 | 270 | < th | dose independent | rect. | 9 | 21 |
| 186 | 250.83 | wind | 1 | 30 | < th | dose independent | sin | 4 | NA |
| 187 | 250.84 | wind | 1 | 30 | < th | dose dependent | rect. | 4 | 6 |
| 214 | 251.03 | wind | 1 | 30 | < th | dose independent | rect. | 13 | 18 |
| 220 | 251.06 | wind | 1 | 30 | < th | dose independent | rect. | 22 | 9 |
| 221 | 251.06 | wind | 1 | 30 | < th | dose independent | rect. | 17 | 14 |
| 230 | 251.14 | wind | 1 | 10 | < th | dose dependent | sin | 15 | NA |
| 241 | 251.23 | wind | 1 | 30 | < th | dose independent | rect. | 22 | 12 |
| 247 | 251.30 | wind | 1 | 270 | < th | dose independent | rect. | 12 | 18 |
| 261 | 251.45 | wind | 1 | 10 | < th | dose dependent | rect. | 13 | 18 |
| 268 | 251.49 | wind | 1 | 30 | < th | dose independent | rect. | 17 | 17 |
| 269 | 251.49 | wind | 1 | 30 | < th | dose independent | rect. | 22 | 17 |
| 271 | 251.49 | wind | 1 | 30 | < th | dose independent | rect. | 13 | 21 |
| 290 | 251.64 | wind | 1 | 30 | < th | dose independent | rect. | 17 | 21 |
| 313 | 251.72 | wind | 1 | 10 | < th | dose dependent | rect. | 22 | 9 |
| 320 | 251.77 | wind | 1 | 10 | < th | dose dependent | rect. | 17 | 14 |
| 332 | 251.83 | wind | 1 | 30 | < th | dose independent | rect. | 22 | 20 |
| 352 | 251.97 | wind | 1 | 30 | < th | dose independent | no | NA | NA |
| 464 | 252.50 | wind | 1 | 30 | < th | dose dependent | sin | 3 | NA |
| 465 | 252.52 | wind | 1 | 270 | < th | dose independent | rect. | 22 | 8 |
| 466 | 252.54 | radiation | 10 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 468 | 252.56 | wind | 1 | 270 | < th | dose independent | sin | 15 | NA |
| 491 | 252.84 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 17 |
| 493 | 252.87 | wind | 1 | 270 | < th | dose independent | rect. | 16 | 14 |
| 500 | 252.94 | wind | 1 | 30 | > th | dose independent | no | NA | NA |
| 514 | 252.99 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 516 | 253.01 | wind | 1 | 30 | < th | dose independent | rect. | 5 | 18 |
| 527 | 253.05 | wind | 1 | 270 | > th | dose independent | sin | 14 | NA |
| 571 | 253.31 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 17 |
| 674 | 253.67 | wind | 1 | 270 | < th | dose dependent | rect. | 9 | 21 |
| 714 | 254.01 | wind | 3 | 270 | < th | dose dependent | rect. | 22 | 8 |
| 725 | 254.16 | wind | 1 | 10 | < th | dose independent | rect. | 13 | 13 |
| 731 | 254.19 | wind | 1 | 270 | < th | dose dependent | rect. | 12 | 18 |
| 749 | 254.33 | wind | 1 | 10 | < th | dose dependent | rect. | 13 | 13 |
| 754 | 254.36 | wind | 1 | 10 | < th | dose independent | rect. | 17 | 9 |
| 763 | 254.45 | wind | 1 | 270 | > th | dose independent | rect. | 17 | 16 |
| 768 | 254.48 | wind | 1 | 30 | > th | dose independent | rect. | 19 | 17 |
| 783 | 254.56 | wind | 1 | 10 | < th | dose independent | rect. | 21 | 5 |
| 798 | 254.62 | wind | 1 | 30 | > th | dose independent | sin | 1 | NA |
| 830 | 254.74 | wind | 1 | 10 | < th | dose dependent | rect. | 22 | 4 |
| 848 | 254.80 | wind | 1 | 10 | < th | dose dependent | rect. | 17 | 9 |
| 876 | 254.90 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 15 |
| 928 | 255.02 | wind | 1 | 30 | > th | dose independent | sin | 11 | NA |
| 959 | 255.09 | wind | 1 | 30 | < th | dose dependent | rect. | 1 | 1 |