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Os02g0232900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to NOD26-like membrane integral protein ZmNIP1-1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.65 (0.093) R2 : 0.387
β1 : -3.42 (0.633) R2dD : 0.274 R2D : -0.146
β2 : 1.73 (0.169) R2dC : 0.143 R2C : 0.0978
β3 : -0.546 (0.354) R2dE : 0.00939 R2E : 0.0397
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -16.2 (2.73) R2dD*E : 0.357 R2D*E : -0.0783
γ1 : 0.483 (0.196) R2dN8 : 0.0197 R2N8 : 0.0457
σ : 1.25
deviance : 724.02
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C
peak time of C : 2.6
E
wheather : temperature
threshold : 24.94
memory length : 750
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 16.4
open length of G : 17.6

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
724.97 1.27 6.65 -3.45 1.68 -0.574 -0.128 -16.5 0.471 2.69 24.94 726 16.8 17.2
753 1.28 6.42 -0.171 1.64 -1.95 0.236 -- 0.569 2.57 30.69 1379 15 18.6
724.02 1.25 6.65 -3.42 1.73 -0.546 -- -16.2 0.483 2.6 24.94 750 16.4 17.6
748.21 1.27 6.4 0.000685 1.7 -2.05 -- -- 0.727 2.63 30.6 1375 15.1 18.4
862.19 1.37 6.64 -3.6 -- -0.61 -- -16 0.453 -- 24.45 705 17.1 18.9
937.9 1.44 6.3 -0.525 1.44 -- -0.873 -- 1.1 2.74 -- -- -- --
940.41 1.44 6.3 -0.504 1.45 -- -- -- 1.1 2.87 -- -- -- --
906.62 1.4 6.36 0.0604 -- -2.14 -- -- 0.809 -- 30.59 1719 13 20.1
747.87 1.27 6.39 -- 1.71 -2.04 -- -- 0.745 2.72 30.6 1377 15.1 18.4
1061.04 1.52 6.29 -0.442 -- -- -- -- 1.14 -- -- -- -- --
947.11 1.44 6.29 -- 1.44 -- -- -- 1.16 2.87 -- -- -- --
905.98 1.4 6.33 -- -- -2.03 -- -- 0.971 -- 28.2 1683 15 20.2
1066.2 1.52 6.28 -- -- -- -- -- 1.19 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 725.39 temperature 25 720 > th dose dependent rect. 17 17
6 734.48 radiation 30 14400 > th dose independent rect. 16 16
7 734.61 radiation 30 14400 > th dose independent rect. 7 1
22 735.65 temperature 25 1440 > th dose dependent rect. 17 3
24 735.89 temperature 25 1440 > th dose dependent rect. 16 6
34 739.57 temperature 20 720 > th dose dependent rect. 15 21
37 740.01 radiation 30 1440 < th dose independent rect. 15 17
40 740.57 humidity 70 1440 < th dose dependent rect. 15 20
45 741.91 radiation 20 1440 > th dose dependent rect. 15 17
53 742.57 humidity 70 1440 < th dose dependent rect. 15 18
54 742.61 wind 9 43200 > th dose independent rect. 15 1
57 743.00 humidity 70 1440 < th dose dependent rect. 16 2
60 743.22 temperature 25 720 > th dose dependent sin 11 NA
68 744.01 humidity 70 1440 < th dose dependent rect. 15 4
69 744.32 humidity 70 1440 < th dose dependent sin 12 NA
70 744.34 humidity 70 1440 < th dose dependent rect. 15 22
96 745.28 radiation 40 1440 < th dose dependent rect. 16 16
154 747.24 humidity 70 1440 < th dose independent rect. 17 15
168 747.79 humidity 70 720 > th dose independent sin 11 NA
180 748.46 temperature 15 270 > th dose dependent rect. 23 22
232 749.31 humidity 70 720 < th dose independent sin 11 NA
240 749.92 humidity 70 720 < th dose independent rect. 17 17
245 750.13 wind 1 4320 > th dose dependent rect. 24 1
247 750.24 humidity 70 1440 < th dose dependent rect. 6 13
258 750.28 humidity 70 1440 < th dose dependent rect. 10 23
285 750.88 humidity 70 1440 < th dose dependent rect. 10 9
288 750.91 humidity 70 1440 < th dose dependent no NA NA
413 751.83 humidity 70 720 > th dose independent rect. 17 15
430 751.90 wind 5 4320 > th dose dependent rect. 17 16
453 752.24 radiation 30 1440 < th dose independent rect. 5 3
478 752.54 wind 9 4320 < th dose independent rect. 17 13
551 753.24 wind 1 4320 > th dose dependent rect. 24 3
564 753.75 radiation 20 1440 > th dose independent rect. 16 16
570 753.85 wind 5 4320 > th dose dependent rect. 17 12
575 754.01 wind 9 4320 < th dose independent rect. 17 9
605 754.65 wind 9 4320 > th dose independent rect. 17 13
610 754.68 humidity 70 1440 < th dose independent rect. 17 3
625 754.78 wind 9 4320 > th dose dependent rect. 17 9
646 754.97 radiation 30 1440 < th dose independent rect. 2 6
648 755.00 humidity 70 1440 > th dose independent rect. 17 18
654 755.15 wind 9 4320 > th dose independent rect. 17 9
662 755.19 wind 9 4320 > th dose dependent rect. 17 7
664 755.22 humidity 70 1440 < th dose independent rect. 17 20
670 755.38 wind 9 4320 < th dose independent rect. 17 6
672 755.44 wind 1 4320 > th dose dependent rect. 20 9
691 755.78 wind 9 4320 > th dose independent rect. 17 6
745 756.69 radiation 20 1440 > th dose independent rect. 7 1
771 756.87 radiation 30 1440 < th dose independent rect. 15 2
805 757.26 radiation 30 1440 < th dose independent rect. 15 4
806 757.26 wind 5 4320 > th dose dependent sin 12 NA
810 757.35 wind 3 4320 < th dose independent rect. 24 1
854 757.57 temperature 20 1440 > th dose dependent rect. 4 7
874 757.78 wind 7 4320 < th dose independent sin 12 NA
875 757.80 radiation 30 1440 < th dose independent rect. 15 8
915 758.42 humidity 60 1440 < th dose independent sin 14 NA
918 758.44 humidity 60 1440 > th dose independent sin 14 NA
926 758.53 wind 9 43200 > th dose dependent rect. 12 1
929 758.58 radiation 20 1440 > th dose dependent rect. 7 1
933 758.64 radiation 30 1440 < th dose independent rect. 15 12
955 759.05 radiation 30 1440 < th dose independent rect. 21 11
962 759.18 temperature 25 1440 > th dose dependent rect. 7 1
980 759.26 wind 9 4320 < th dose dependent rect. 24 1
994 759.42 wind 7 4320 > th dose independent sin 12 NA
995 759.42 temperature 25 1440 > th dose dependent rect. 6 17