BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0165200 Os01g0165200|AK066661
(700 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0165200 STAT protein family protein 1437 0.0
Os05g0164900 Galactose oxidase, central domain containing p... 364 e-100
Os05g0594100 Similar to GDA2 protein 123 4e-28
AK110386 114 2e-25
Os05g0498700 Similar to Gda-1 protein 114 3e-25
Os01g0550300 Similar to Gda-1 protein 114 4e-25
Os06g0227200 Conserved hypothetical protein 109 6e-24
Os02g0745600 Conserved hypothetical protein 95 1e-19
Os09g0563700 Conserved hypothetical protein 93 7e-19
Os11g0525700 Conserved hypothetical protein 80 4e-15
Os02g0504900 Cyclin-like F-box domain containing protein 68 2e-11
>Os01g0165200 STAT protein family protein
Length = 700
Score = 1437 bits (3721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 688/700 (98%), Positives = 688/700 (98%)
Query: 1 MGAGKKTQTENEFRELPEKELGGVVFCCNNNTFDECFTKQLFGLPQRNILYVKNVKPGLP 60
MGAGKKTQTENEFRELPEKELGGVVFCCNNNTFDECFTKQLFGLPQRNILYVKNVKPGLP
Sbjct: 1 MGAGKKTQTENEFRELPEKELGGVVFCCNNNTFDECFTKQLFGLPQRNILYVKNVKPGLP 60
Query: 61 LFLFNYSNRQLHGIFKATSTGQLNIDRFAWMSEQSNDAKTNAKTTPFPAQVRFSTRTECP 120
LFLFNYSNRQLHGIFKATSTGQLNIDRFAWMSEQSNDAKTNAKTTPFPAQVRFSTRTECP
Sbjct: 61 LFLFNYSNRQLHGIFKATSTGQLNIDRFAWMSEQSNDAKTNAKTTPFPAQVRFSTRTECP 120
Query: 121 PLPESKYKSVIINNYRKDKPSHFRFELDHRQTRDLISLFLPAPVRANQNKLSIPKPPATA 180
PLPESKYKSVIINNYRKDKPSHFRFELDHRQTRDLISLFLPAPVRANQNKLSIPKPPATA
Sbjct: 121 PLPESKYKSVIINNYRKDKPSHFRFELDHRQTRDLISLFLPAPVRANQNKLSIPKPPATA 180
Query: 181 HTVPNPWNRPLPFLTAKAPVVSDKVKSESNVKDVDQFNVSSHSHDIVPHTLPDVEVDLAS 240
HTVPNPWNRPLPFLTAKAPVVSDKVKSESNVKDVDQFNVSSHSHDIVPHTLPDVEVDLAS
Sbjct: 181 HTVPNPWNRPLPFLTAKAPVVSDKVKSESNVKDVDQFNVSSHSHDIVPHTLPDVEVDLAS 240
Query: 241 TSTTSRSNLNKDASGCDDLVAGLIKEDKESVDDDQHAKMDLPVKLQELSSLQQKEANFLE 300
TSTTSRSNLNKDASGCDDLVAGLIKEDKESVDDDQHAKMDLPVKLQELSSLQQKEANFLE
Sbjct: 241 TSTTSRSNLNKDASGCDDLVAGLIKEDKESVDDDQHAKMDLPVKLQELSSLQQKEANFLE 300
Query: 301 DAPVSTSAQSIRQDTRFAATLPKDSFNATSQCDTSLKDTSFVQCHEYAELYQIINDLSKK 360
DAPVSTSAQSIRQDTRFAATLPKDSFNATSQCDTSLKDTSFVQCHEYAELYQIINDLSKK
Sbjct: 301 DAPVSTSAQSIRQDTRFAATLPKDSFNATSQCDTSLKDTSFVQCHEYAELYQIINDLSKK 360
Query: 361 TEEMEKMKVDSDQEILLLKKLVKVMERKVEHLEQQLEKSHSSSAPLFGVTNDDVEGPSIL 420
TEEMEKMKVDSDQEILLLKKLVKVMERKVEHLEQQLEKSHSSSAPLFGVTNDDVEGPSIL
Sbjct: 361 TEEMEKMKVDSDQEILLLKKLVKVMERKVEHLEQQLEKSHSSSAPLFGVTNDDVEGPSIL 420
Query: 421 LTGGHNGINWLSSLDSYCPATDILETLMPMSSARAYAAVATLKDHVFIFGGWNGIRSLWY 480
LTGGHNGINWLSSLDSYCPATDILETLMPMSSARAYAAVATLKDHVFIFGGWNGIRSLWY
Sbjct: 421 LTGGHNGINWLSSLDSYCPATDILETLMPMSSARAYAAVATLKDHVFIFGGWNGIRSLWY 480
Query: 481 NTVECYNRGANKWIGLPCLNHEKGHLAGATLNGKIFAIGGGDGSQSFSEVEMFDPAVGKW 540
NTVECYNRGANKWIGLPCLNHEKGHLAGATLNGKIFAIGGGDGSQSFSEVEMFDPAVGKW
Sbjct: 481 NTVECYNRGANKWIGLPCLNHEKGHLAGATLNGKIFAIGGGDGSQSFSEVEMFDPAVGKW 540
Query: 541 IYSLSMQQPRCAPAAAELNGVLYVIGGYDGNMYLQSAERYDPREGFWTQLPRMRTRRGSH 600
IYSLSMQQPRCAPAAAELNGVLYVIGGYDGNMYLQSAERYDPREGFWTQLPRMRTRRGSH
Sbjct: 541 IYSLSMQQPRCAPAAAELNGVLYVIGGYDGNMYLQSAERYDPREGFWTQLPRMRTRRGSH 600
Query: 601 SVVVLGDSLHALGGLNRNTTFSSVEIFDTRANSWRRGSPLSVPRAHGCAVTLDGNAYLIG 660
SVVVLGDSLHALGGLNRNTTFSSVEIFDTRANSWRRGSPLSVPRAHGCAVTLDGNAYLIG
Sbjct: 601 SVVVLGDSLHALGGLNRNTTFSSVEIFDTRANSWRRGSPLSVPRAHGCAVTLDGNAYLIG 660
Query: 661 GIQSSXXXXXXXXXXXXGQGWSISGSKAFGKRAFACAVAI 700
GIQSS GQGWSISGSKAFGKRAFACAVAI
Sbjct: 661 GIQSSEEYVETVEVYKEGQGWSISGSKAFGKRAFACAVAI 700
>Os05g0164900 Galactose oxidase, central domain containing protein
Length = 1049
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/430 (45%), Positives = 263/430 (61%), Gaps = 13/430 (3%)
Query: 274 DQHAKMDLPVKLQELSSLQQKEANFLEDAPVSTSAQSIRQDTRFAATLPKDSFNATSQCD 333
DQH + V S Q A +S Q + T+ A+L + F A + +
Sbjct: 630 DQHVPEETQVNASLPSPNQHVPEETKATAAISCPDQHV---TQANASLSQHEFGAKVEDN 686
Query: 334 TSLKDTSFVQCHEYAELYQIINDLSKKTEEMEKMKVDSDQEILLLKKLVKVMERKVEHLE 393
TSL+ Q AEL +I+ DL KKT+ ++ + S +EIL LK++VK KV+ LE
Sbjct: 687 TSLE-----QNQGNAELIKIVLDLIKKTDSLDMRQNKSHEEILSLKEVVKDSGTKVKQLE 741
Query: 394 QQLEKSH---SSSAPLFGVTNDDVEGPSILLTGGHNGINWLSSLDSYCPATDILETLMPM 450
++++ SS L G D ++ PSI L GG+NG++WLSSLD++ P DIL L P+
Sbjct: 742 YRIDELQFKLDSSLSLVGDACDTLDKPSIFLIGGYNGVSWLSSLDAFSPEKDILVPLAPL 801
Query: 451 SSARAYAAVATLKDHVFIFGGWNGIRSLWYNTVECYNRGANKWIGLPCLNHEKGHLAGAT 510
SSAR+YA+VATL+ +F+ GG G+ + NTVECYN N+W+ PCLN++KG LA +
Sbjct: 802 SSARSYASVATLEGCIFVCGG--GVGDSFGNTVECYNTMCNEWMACPCLNNKKGSLAAVS 859
Query: 511 LNGKIFAIGGGDGSQSFSEVEMFDPAVGKWIYSLSMQQPRCAPAAAELNGVLYVIGGYDG 570
L+GKI+AIGGGDG ++S+VEMFDP +GKWI S SM R A AAE+N V+Y GG+DG
Sbjct: 860 LDGKIYAIGGGDGIVTYSDVEMFDPFLGKWICSPSMMNSRFALGAAEMNSVIYATGGFDG 919
Query: 571 NMYLQSAERYDPREGFWTQLPRMRTRRGSHSVVVLGDSLHALGGLNRNTTFSSVEIFDTR 630
YLQSAERYDPREGFW +LP M RRG H+V LG L+A+GG N + SSVEIFD R
Sbjct: 920 FSYLQSAERYDPREGFWARLPSMNVRRGCHTVAALGGVLYAIGGYNGDRMVSSVEIFDPR 979
Query: 631 ANSWRRGSPLSVPRAHGCAVTLDGNAYLIGGIQSSXXXXXXXXXXXXGQGWSISGSKAFG 690
NSWR G P++ PR + VTL N ++IGG+QSS GWS+ G + G
Sbjct: 980 RNSWRVGDPMNFPRGYASTVTLGDNVFVIGGLQSSEKFMDSVEVYNVKCGWSVPGFSSIG 1039
Query: 691 KRAFACAVAI 700
R FA A +
Sbjct: 1040 VRCFASAAVV 1049
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 109/244 (44%), Positives = 148/244 (60%), Gaps = 18/244 (7%)
Query: 2 GAGKKTQTENEFRELPEKELGGVVFCCNNNTFDECFTKQLFGLPQRNILYVKNVKPGLPL 61
G +QT + R L E +LGGV+F C +NT +ECF KQLFGLP + YV+NVKPGLPL
Sbjct: 3 GQHLNSQTVDLARNLRENQLGGVIFGCKHNTIEECFEKQLFGLPSVHYSYVRNVKPGLPL 62
Query: 62 FLFNYSNRQLHGIFKATSTGQLNIDRFAWMSEQSNDAKTNAKTTPFPAQVRFSTRTECPP 121
FLFNYS+R+LHGIF+A S GQ+ ID +AW S+D T FPAQVR T+T PP
Sbjct: 63 FLFNYSDRKLHGIFEAASPGQMCIDPYAW----SHDGSLR---TSFPAQVRICTKTRYPP 115
Query: 122 LPESKYKSVIINNYRKDKPSHFRFELDHRQTRDLISLFLPAPVRANQNKLSIPKPPATAH 181
L ES++++V+ +NY HF FELDH QT+ LI++F A N +P ++
Sbjct: 116 LMESQFRTVLGDNYYNHH--HFYFELDHAQTKALIAVFK---SLAPANFTQVPA-VSSKR 169
Query: 182 TVPNPWNRPLPFLTAKAPVVSDKVKSESNVKDVDQFNVSSHSHDIVPHTLPDVEVDLAST 241
T+ PLP +APV+ D+ K ++ KD++ F+V S S V D +V+ S
Sbjct: 170 TI-----APLPSTKRQAPVIPDQKKGSASPKDINPFSVLSQSGGAVKDNWADSDVENGSI 224
Query: 242 STTS 245
S +S
Sbjct: 225 SRSS 228
>Os05g0594100 Similar to GDA2 protein
Length = 277
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 85/142 (59%), Gaps = 9/142 (6%)
Query: 18 EKELGGVVFCCNNNTFDECFTKQLFGLPQRNILYVKNVKPGLPLFLFNYSNRQLHGIFKA 77
E+ +GG +F CNN T +E +QLFGLP R V+ ++PGLPLFL+NYS QLHGIF+A
Sbjct: 139 EEAIGGYIFVCNNETMEENLKRQLFGLPSRYRDSVRAIRPGLPLFLYNYSTHQLHGIFEA 198
Query: 78 TSTGQLNIDRFAWMSEQSNDAKTNAKTTPFPAQVRFSTRTECPPLPESKYKSVIINNYRK 137
TS G NID AW D+K + FPAQVR +TR C PL E ++ V+ +
Sbjct: 199 TSFGGSNIDPGAW-----EDSKCPGGESRFPAQVRVATRKICEPLEEDAFRPVL---HHY 250
Query: 138 DKPSHFRFELDHRQTRDLISLF 159
D P FR EL + L+ +F
Sbjct: 251 DGPK-FRLELTVAEALSLLDIF 271
>AK110386
Length = 558
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 105/232 (45%), Gaps = 2/232 (0%)
Query: 431 LSSLDSYCPATDILETLMPMSSARAYAAVATLKDHVFIFGGWNGIRSLWYNTVECYNRGA 490
L +DSY P+T M+S R V+ GG + Y+T EC+
Sbjct: 14 LDGIDSYDPSTAQWRHWPHMTSKRWAPVCTVCGGKVYAVGG-GVVSKQSYDTAECFEPLT 72
Query: 491 NKWIGLPCLNHEKGHLAGATLNGKIFAIGGGDGSQSFSEVEMFDPAVGKWIYSLSMQQPR 550
+W + ++ ++ AT+ GK++A+GG DG+ + E +DPA+ W M R
Sbjct: 73 GEWTRVSSMSQKRSAGGAATVGGKVYAMGGFDGASQLASTECYDPALNAWRRVAPMTCRR 132
Query: 551 CAPAAAELNGVLYVIGGYDGNMYLQSAERYDPREGFWTQLPR-MRTRRGSHSVVVLGDSL 609
AA +YV GGYDG SAE Y P W +LP M RR V+G ++
Sbjct: 133 RGLAAVAFKDEVYVFGGYDGVQRFNSAEAYSPATDSWRKLPALMNVRRDGCCAAVVGTAI 192
Query: 610 HALGGLNRNTTFSSVEIFDTRANSWRRGSPLSVPRAHGCAVTLDGNAYLIGG 661
+ LGG N ++ E +DT WR +P+ R A ++G + GG
Sbjct: 193 YVLGGYNGKRRLATAEAYDTATGVWRVLAPMMAERDGCAAACVNGKLCVFGG 244
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 95/191 (49%), Gaps = 3/191 (1%)
Query: 416 GPSILLTGGHNGINWLSSLDSYCPATDILETLMPMSSARAYAAVATLKDHVFIFGGWNGI 475
G + GG +G + L+S + Y PA + + PM+ R A KD V++FGG++G+
Sbjct: 94 GGKVYAMGGFDGASQLASTECYDPALNAWRRVAPMTCRRRGLAAVAFKDEVYVFGGYDGV 153
Query: 476 RSLWYNTVECYNRGANKWIGLPCL-NHEKGHLAGATLNGKIFAIGGGDGSQSFSEVEMFD 534
+ +N+ E Y+ + W LP L N + A + I+ +GG +G + + E +D
Sbjct: 154 QR--FNSAEAYSPATDSWRKLPALMNVRRDGCCAAVVGTAIYVLGGYNGKRRLATAEAYD 211
Query: 535 PAVGKWIYSLSMQQPRCAPAAAELNGVLYVIGGYDGNMYLQSAERYDPREGFWTQLPRMR 594
A G W M R AAA +NG L V GGYDG +L +AE YD G W LP
Sbjct: 212 TATGVWRVLAPMMAERDGCAAACVNGKLCVFGGYDGKAWLNTAEWYDAAAGQWRWLPAGP 271
Query: 595 TRRGSHSVVVL 605
+R + V L
Sbjct: 272 LKRSYCAAVTL 282
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 96/198 (48%), Gaps = 3/198 (1%)
Query: 466 VFIFGGWNGIRSLWYNTVECYNRGANKWIGLPCLNHEKGHLAGATLNGKIFAIGGGDGS- 524
+F+ GG S + ++ Y+ +W P + ++ GK++A+GGG S
Sbjct: 1 MFVVGGIRDAAST-LDGIDSYDPSTAQWRHWPHMTSKRWAPVCTVCGGKVYAVGGGVVSK 59
Query: 525 QSFSEVEMFDPAVGKWIYSLSMQQPRCAPAAAELNGVLYVIGGYDGNMYLQSAERYDPRE 584
QS+ E F+P G+W SM Q R A AA + G +Y +GG+DG L S E YDP
Sbjct: 60 QSYDTAECFEPLTGEWTRVSSMSQKRSAGGAATVGGKVYAMGGFDGASQLASTECYDPAL 119
Query: 585 GFWTQLPRMRTRRGSHSVVVLGDSLHALGGLNRNTTFSSVEIFDTRANSWRRGSPLSVPR 644
W ++ M RR + V D ++ GG + F+S E + +SWR+ L R
Sbjct: 120 NAWRRVAPMTCRRRGLAAVAFKDEVYVFGGYDGVQRFNSAEAYSPATDSWRKLPALMNVR 179
Query: 645 AHGCAVTLDGNA-YLIGG 661
GC + G A Y++GG
Sbjct: 180 RDGCCAAVVGTAIYVLGG 197
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 95/216 (43%), Gaps = 5/216 (2%)
Query: 439 PATDILETLMPMSSARAYAAVATLKDHVFIFGGWNGIRSLWYNTVECYNRGANKWIGLPC 498
P T + MS R+ AT+ V+ GG++G L + ECY+ N W +
Sbjct: 70 PLTGEWTRVSSMSQKRSAGGAATVGGKVYAMGGFDGASQL--ASTECYDPALNAWRRVAP 127
Query: 499 LNHEKGHLAGATLNGKIFAIGGGDGSQSFSEVEMFDPAVGKW--IYSLSMQQPRCAPAAA 556
+ + LA +++ GG DG Q F+ E + PA W + +L M R AA
Sbjct: 128 MTCRRRGLAAVAFKDEVYVFGGYDGVQRFNSAEAYSPATDSWRKLPAL-MNVRRDGCCAA 186
Query: 557 ELNGVLYVIGGYDGNMYLQSAERYDPREGFWTQLPRMRTRRGSHSVVVLGDSLHALGGLN 616
+ +YV+GGY+G L +AE YD G W L M R + + L GG +
Sbjct: 187 VVGTAIYVLGGYNGKRRLATAEAYDTATGVWRVLAPMMAERDGCAAACVNGKLCVFGGYD 246
Query: 617 RNTTFSSVEIFDTRANSWRRGSPLSVPRAHGCAVTL 652
++ E +D A WR + R++ AVTL
Sbjct: 247 GKAWLNTAEWYDAAAGQWRWLPAGPLKRSYCAAVTL 282
>Os05g0498700 Similar to Gda-1 protein
Length = 314
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 86/157 (54%), Gaps = 17/157 (10%)
Query: 9 TENEFRELPEKE-------LGGVVFCCNNNTFDECFTKQLFGLPQRNILYVKNVKPGLPL 61
+ F+ LP E LGG +F CNN+T E +QLFGLP R V+ + PGLPL
Sbjct: 162 VDKRFKTLPTSEMLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPARYRDSVRAIIPGLPL 221
Query: 62 FLFNYSNRQLHGIFKATSTGQLNIDRFAWMSEQSNDAKTNAKTTPFPAQVRFSTRTECPP 121
FL+NY+ QLHG+F+A+S G NID AW D K ++ FPAQVR R C P
Sbjct: 222 FLYNYTTHQLHGVFEASSFGGSNIDPTAW-----EDKKCKGESR-FPAQVRIRIRKLCKP 275
Query: 122 LPESKYKSVIINNYRKDKPSHFRFELDHRQTRDLISL 158
L E ++ V+ + D P FR EL +T L+ L
Sbjct: 276 LEEDAFRPVL---HHYDGPK-FRLELSIAETLSLLDL 308
>Os01g0550300 Similar to Gda-1 protein
Length = 328
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 89/158 (56%), Gaps = 17/158 (10%)
Query: 9 TENEFRELPEKE-------LGGVVFCCNNNTFDECFTKQLFGLPQRNILYVKNVKPGLPL 61
++ F+ LP E +GG +F CNN+T +E +QLFGLP R V+ ++PGLPL
Sbjct: 175 SDKRFKTLPASEALPRDEAIGGYIFVCNNDTMEENLKRQLFGLPSRYRDSVRAIRPGLPL 234
Query: 62 FLFNYSNRQLHGIFKATSTGQLNIDRFAWMSEQSNDAKTNAKTTPFPAQVRFSTRTECPP 121
FL+NYS QLHGIF+A S G NID AW D K ++ FPAQV+ +TR P
Sbjct: 235 FLYNYSTHQLHGIFEAASFGGTNIDPTAW-----EDKKCPGESR-FPAQVKVATRKIYDP 288
Query: 122 LPESKYKSVIINNYRKDKPSHFRFELDHRQTRDLISLF 159
L E ++ ++ + D P FR EL + L+ +F
Sbjct: 289 LEEDAFRPIL---HHYDGPK-FRLELSVAEALSLLDIF 322
>Os06g0227200 Conserved hypothetical protein
Length = 704
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 86/155 (55%), Gaps = 24/155 (15%)
Query: 22 GGVVFCCNNNTFDECFTKQLFGLPQRNILYVKNVKPGLPLFLFNYSNRQLHGIFKATSTG 81
GG++F CN T ECF +LFG P+ I V+ ++PG+ LFL+++ + L+G++KA S G
Sbjct: 249 GGLIFMCNAQTKPECFQSRLFGYPRGKIGIVEKIRPGMRLFLYDFDLKLLYGVYKAVSKG 308
Query: 82 QLNIDRFAWMSEQSNDAKTNAKTTPFPAQVRFSTRTECPPLPESKYKSVIINNYRKDKPS 141
L++ R A+ + FPAQV+F +C PLPES++K I NY S
Sbjct: 309 GLDLVRDAFSGK-------------FPAQVKFKIDKDCLPLPESRFKDAIRENYSAK--S 353
Query: 142 HFRFELDHRQTRDLISLFLPAPVRANQNKLSIPKP 176
F EL+ RQ LI+LF +S+P+P
Sbjct: 354 KFNPELNSRQVHRLIALF---------ESVSVPQP 379
>Os02g0745600 Conserved hypothetical protein
Length = 488
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 83/156 (53%), Gaps = 17/156 (10%)
Query: 6 KTQTENEFRELPEKELGGVVFCCNNNTFDECFTKQLFGLPQRNILYVKNVKPGLPLFLFN 65
K + +++ RE K G +F C+ T ECF +FGLP+ I V+ ++PG LFL++
Sbjct: 111 KEKKDDKARE--RKGEAGFIFMCSAKTKPECFQNGVFGLPKGKIDVVEKIQPGAKLFLYD 168
Query: 66 YSNRQLHGIFKATSTGQLNIDRFAWMSEQSNDAKTNAKTTPFPAQVRFSTRTECPPLPES 125
+ + L+GI+KA + G L++ R A+ + FPAQV+F +C PLPES
Sbjct: 169 FDLKLLYGIYKAKTKGGLDLVRGAFHGK-------------FPAQVKFKVDKDCLPLPES 215
Query: 126 KYKSVIINNYRKDKPSHFRFELDHRQTRDLISLFLP 161
+K I NY + F EL +Q L+ LF P
Sbjct: 216 SFKHAIKENY--NSKGKFTQELSLKQVHRLLELFKP 249
>Os09g0563700 Conserved hypothetical protein
Length = 710
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 80/147 (54%), Gaps = 14/147 (9%)
Query: 13 FRELPEKELGGVVFCCNNNTFDECFTKQLFGLPQRNILYVKNVKPGLPLFLFNYSNRQLH 72
FRE + + G +F N T + CF +FGLP +V+N++ G+PLFLF+++ R+L+
Sbjct: 10 FRE--DASMAGAIFMSNTATRELCFRSNIFGLPIEYQPFVRNIRQGMPLFLFDHTERKLY 67
Query: 73 GIFKATSTGQLNIDRFAWMSEQSNDAKTNAKTTPFPAQVRFSTRTECPPLPESKYKSVII 132
G+F+ATS G NI R A+ S + +PAQV F +C PL E ++ I
Sbjct: 68 GVFEATSDGGFNIIRSAFSSIGCS----------YPAQVCFKIIWKCRPLTEDEFSPAIK 117
Query: 133 NNYRKDKPSHFRFELDHRQTRDLISLF 159
NY P F F+L ++Q L LF
Sbjct: 118 ENYY--MPWKFYFDLSYQQVVCLYQLF 142
>Os11g0525700 Conserved hypothetical protein
Length = 644
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 16/140 (11%)
Query: 22 GGVVFCCNNNTFDECFTKQLFGLPQRNILYVKNVKPGLPLFLFNYSNRQLHGIFKATSTG 81
G +F C+ T EC+ + + G P+ + V ++ G LFL+++ +R LHG ++A S G
Sbjct: 46 AGYIFMCSGATKPECYARGVMGQPRGRLPAVSRIRRGAALFLYDFDSRHLHGPYRAASDG 105
Query: 82 QLNIDRFAWMSEQSNDAKTNAKTTPFPAQVRFSTRTECPPLPESKYKSVIINNYRKDKPS 141
L++ A+ FPAQV+F+ + P+PES +S I NY K
Sbjct: 106 GLDLAPAAFGGR-------------FPAQVKFTIDGDFMPIPESSLRSAIKENYSNGK-- 150
Query: 142 HFRFELDHRQTRDLISLFLP 161
F EL Q +L +LF P
Sbjct: 151 -FSSELTLAQVENLRTLFRP 169
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 16/140 (11%)
Query: 22 GGVVFCCNNNTFDECFTKQLFGLPQRNILYVKNVKPGLPLFLFNYSNRQLHGIFKATSTG 81
G +F CN T EC+ ++ GLP ++ V ++ G LFL+++ + L+G + A S G
Sbjct: 226 AGYIFMCNGVTKAECYRHRVMGLPLGSLDVVSRIRRGTALFLYDFDAKHLYGPYHADSNG 285
Query: 82 QLNIDRFAWMSEQSNDAKTNAKTTPFPAQVRFSTRTECPPLPESKYKSVIINNYRKDKPS 141
L + A+ FPAQV+F+ + P+PES ++ I NY K
Sbjct: 286 GLTLVPDAFRGR-------------FPAQVKFTVDGDFMPIPESSLRTAIKENYSNGK-- 330
Query: 142 HFRFELDHRQTRDLISLFLP 161
F EL Q L +LF P
Sbjct: 331 -FSPELTLVQVEKLRALFRP 349
>Os02g0504900 Cyclin-like F-box domain containing protein
Length = 385
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 503 KGHLAGATLNGKIFAIGG---GDGSQSFS-EVEMFDPAVGKWIYSLSMQQPRCAPAAAEL 558
K L+GK+F I G G + S EV +D + +W+ M RC A AE+
Sbjct: 137 KAGFGVVVLDGKLFVIAGYAADHGKECVSDEVYRYDSCLNRWVELSKMNVARCDFACAEV 196
Query: 559 NGVLYVIGGYDGNM-YLQSAERYDPREGFWTQLPRMRTRRGSHSVVVLGDSLHALGGLNR 617
NG++YV GG+ N L S E YD + WT + +R R L+ +GG +R
Sbjct: 197 NGMIYVAGGFGPNGDSLSSVEVYDAEQNKWTLIESLRRPRWGCFACSFEGKLYVMGGRSR 256
Query: 618 ----NTTFSSVEIFDTRANSW 634
NT F V++++ NSW
Sbjct: 257 FTIGNTRF--VDVYNPNDNSW 275
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.132 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 24,600,638
Number of extensions: 1103744
Number of successful extensions: 3631
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 3595
Number of HSP's successfully gapped: 17
Length of query: 700
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 592
Effective length of database: 11,396,689
Effective search space: 6746839888
Effective search space used: 6746839888
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 160 (66.2 bits)