Os02g0745600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0745600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.36 | 0.316 | 7.21 | 0.0771 | 0.672 | -1.2 | 0.508 | 1.94 | 0.0148 | 4.02 | 23.5 | 1443 | -- | -- |
| 46.82 | 0.319 | 7.23 | -0.268 | 0.638 | -1.16 | 0.594 | -- | 0.0732 | 3.76 | 20.92 | 7950 | -- | -- |
| 46 | 0.316 | 7.21 | 0.0841 | 0.67 | -1.2 | -- | 1.94 | 0.023 | 4.2 | 23.3 | 1457 | -- | -- |
| 47.34 | 0.32 | 7.24 | -0.352 | 0.632 | -1.09 | -- | -- | 0.0221 | 4.26 | 21.65 | 7452 | -- | -- |
| 58.45 | 0.358 | 7.28 | -0.561 | -- | -1.44 | -- | 0.469 | -0.13 | -- | 23.3 | 1457 | -- | -- |
| 88.02 | 0.44 | 7.32 | -0.881 | 0.603 | -- | 0.36 | -- | -0.349 | 4.29 | -- | -- | -- | -- |
| 88.33 | 0.44 | 7.32 | -0.884 | 0.608 | -- | -- | -- | -0.351 | 4.45 | -- | -- | -- | -- |
| 55.67 | 0.349 | 7.28 | -0.587 | -- | -1.46 | -- | -- | -0.108 | -- | 21.65 | 7452 | -- | -- |
| 49.06 | 0.326 | 7.22 | -- | 0.628 | -1.28 | -- | -- | 0.109 | 4.25 | 19.48 | 7508 | -- | -- |
| 108.13 | 0.486 | 7.33 | -0.86 | -- | -- | -- | -- | -0.335 | -- | -- | -- | -- | -- |
| 108.94 | 0.488 | 7.3 | -- | 0.591 | -- | -- | -- | -0.252 | 4.48 | -- | -- | -- | -- |
| 63 | 0.371 | 7.26 | -- | -- | -1.65 | -- | -- | -0.00906 | -- | 19.48 | 7508 | -- | -- |
| 127.66 | 0.527 | 7.31 | -- | -- | -- | -- | -- | -0.239 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.76 | temperature | 25 | 1440 | > th | dose dependent | sin | 2 | NA |
| 4 | 45.84 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 12 |
| 7 | 45.89 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 8 |
| 10 | 45.91 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 6 |
| 21 | 45.96 | temperature | 25 | 1440 | > th | dose dependent | rect. | 4 | 15 |
| 48 | 46.04 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 21 |
| 169 | 46.36 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 200 | 46.54 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 248 | 47.05 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 251 | 47.07 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 253 | 47.09 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 262 | 47.19 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 263 | 47.20 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 277 | 47.32 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 278 | 47.32 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 282 | 47.35 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 284 | 47.37 | temperature | 20 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 365 | 47.78 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 3 |
| 493 | 48.12 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 504 | 48.15 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 532 | 48.23 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 625 | 48.48 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 650 | 48.54 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 18 |
| 686 | 48.63 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 687 | 48.64 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 18 |
| 715 | 48.71 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 745 | 48.83 | temperature | 20 | 90 | > th | dose dependent | rect. | 9 | 23 |
| 874 | 49.20 | temperature | 20 | 90 | > th | dose dependent | rect. | 14 | 23 |
| 947 | 49.38 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 22 |
| 968 | 49.41 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |