Os06g0227200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0227200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.03 | 0.27 | 10.9 | 1.76 | 1.12 | -0.593 | 0.169 | 2.72 | 0.455 | 22.6 | 14.9 | 725 | -- | -- |
| 37.72 | 0.286 | 10.9 | 1.44 | 1.07 | -0.591 | 0.681 | -- | 0.38 | 22.9 | -12.89 | 5158 | -- | -- |
| 33.12 | 0.268 | 10.9 | 1.78 | 1.12 | -0.585 | -- | 2.82 | 0.461 | 22.7 | 14.9 | 780 | -- | -- |
| 39.1 | 0.291 | 10.9 | 1.35 | 1.03 | -0.505 | -- | -- | 0.345 | 22.9 | -19.66 | 5696 | -- | -- |
| 82.79 | 0.426 | 10.9 | 1.55 | -- | -1.27 | -- | 1.37 | 0.461 | -- | 14.4 | 808 | -- | -- |
| 42.22 | 0.305 | 11 | 1.13 | 1.01 | -- | 0.593 | -- | 0.237 | 22.8 | -- | -- | -- | -- |
| 43.69 | 0.31 | 11 | 1.11 | 1.01 | -- | -- | -- | 0.235 | 22.8 | -- | -- | -- | -- |
| 84.39 | 0.43 | 10.9 | 1.36 | -- | -1.24 | -- | -- | 0.408 | -- | 14.4 | 808 | -- | -- |
| 57.8 | 0.354 | 11 | -- | 0.999 | 0.69 | -- | -- | -0.0941 | 22.8 | -16.46 | 47520 | -- | -- |
| 106.78 | 0.483 | 10.9 | 1.13 | -- | -- | -- | -- | 0.242 | -- | -- | -- | -- | -- |
| 76.15 | 0.408 | 11 | -- | 1.02 | -- | -- | -- | 0.112 | 22.9 | -- | -- | -- | -- |
| 119.59 | 0.509 | 11 | -- | -- | 0.735 | -- | -- | -0.104 | -- | -5.969 | 47520 | -- | -- |
| 140.5 | 0.553 | 11 | -- | -- | -- | -- | -- | 0.116 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.88 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 3 | 31.90 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 32 | 32.57 | humidity | 90 | 14400 | > th | dose dependent | rect. | 19 | 8 |
| 33 | 32.58 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 10 |
| 35 | 32.59 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 44 | 32.63 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 19 |
| 79 | 32.80 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 103 | 32.88 | temperature | 15 | 30 | > th | dose dependent | rect. | 5 | 21 |
| 108 | 32.89 | humidity | 90 | 14400 | > th | dose dependent | sin | 12 | NA |
| 118 | 32.90 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 120 | 32.91 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 131 | 32.93 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 133 | 32.93 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 9 |
| 141 | 32.94 | temperature | 15 | 720 | > th | dose dependent | sin | 7 | NA |
| 148 | 32.94 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 21 |
| 149 | 32.94 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 183 | 33.00 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 203 | 33.02 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 205 | 33.03 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 212 | 33.03 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 216 | 33.04 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 242 | 33.09 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 7 |
| 249 | 33.10 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 4 |
| 256 | 33.10 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 260 | 33.11 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 263 | 33.11 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 270 | 33.12 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 276 | 33.12 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 7 |
| 319 | 33.16 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 320 | 33.16 | temperature | 15 | 1440 | > th | dose dependent | sin | 17 | NA |
| 355 | 33.18 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 363 | 33.18 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 9 |
| 364 | 33.18 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 390 | 33.19 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 392 | 33.19 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 429 | 33.21 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 489 | 33.23 | temperature | 30 | 1440 | < th | dose dependent | sin | 17 | NA |
| 520 | 33.24 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 10 |
| 602 | 33.27 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 18 |
| 663 | 33.29 | wind | 9 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 807 | 33.32 | temperature | 15 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 833 | 33.33 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 19 |
| 947 | 33.35 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 23 |
| 981 | 33.37 | radiation | 10 | 4320 | < th | dose dependent | rect. | 3 | 2 |