BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0628100 Os12g0628100|AK121150
(145 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0628100 Similar to Actin-depolymerizing factor 6 (ADF-... 299 5e-82
Os03g0780400 Similar to Actin-depolymerizing factor 6 (ADF-... 237 3e-63
Os10g0521100 Similar to Actin-depolymerizing factor 6 (ADF-... 192 6e-50
Os02g0663800 Similar to Actin-depolymerizing factor (ADF) 186 6e-48
Os04g0555700 Similar to Actin-depolymerizing factor (ADF) 185 9e-48
Os07g0484200 Similar to Actin-depolymerizing factor 1 (ADF ... 185 1e-47
Os03g0243100 Similar to Actin-depolymerizing factor 5 (ADF-... 178 1e-45
Os05g0113400 Similar to Actin-depolymerizing factor 2 (ADF 2) 177 2e-45
Os03g0820600 Similar to Actin-depolymerizing factor 3 (ADF ... 168 1e-42
AK105744 168 1e-42
Os07g0297500 167 2e-42
Os03g0820500 Similar to WCOR719 150 2e-37
>Os12g0628100 Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6)
Length = 145
Score = 299 bits (766), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 145/145 (100%), Positives = 145/145 (100%)
Query: 1 MAFVRSRANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFD 60
MAFVRSRANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFD
Sbjct: 1 MAFVRSRANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFD 60
Query: 61 DFMDSLPESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRREL 120
DFMDSLPESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRREL
Sbjct: 61 DFMDSLPESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRREL 120
Query: 121 DGVHYEIQATDPSELDIELLRERAH 145
DGVHYEIQATDPSELDIELLRERAH
Sbjct: 121 DGVHYEIQATDPSELDIELLRERAH 145
>Os03g0780400 Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6)
Length = 145
Score = 237 bits (604), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 108/145 (74%), Positives = 132/145 (91%)
Query: 1 MAFVRSRANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFD 60
MAF+RS +NASSG+GVA + + TFLELQ KK+ RYVIFKI++K K+VVVEKTG++TES+D
Sbjct: 1 MAFMRSHSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYD 60
Query: 61 DFMDSLPESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRREL 120
DF+ SLPE+DCRYA+YDFDFVT EN QKSKIFF+AWSPS SRIRAKMLY+TSK+R ++EL
Sbjct: 61 DFLASLPENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQEL 120
Query: 121 DGVHYEIQATDPSELDIELLRERAH 145
DG HYEIQATDP+E+D+E+LRERAH
Sbjct: 121 DGFHYEIQATDPTEVDLEVLRERAH 145
>Os10g0521100 Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6)
Length = 151
Score = 192 bits (488), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 113/142 (79%)
Query: 4 VRSRANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFM 63
V + + I V + K F EL+R+K HRYVIFKIDD+ +E+VVEKTG+ ES+DDF
Sbjct: 8 VMGGGGSPAWIEVPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFT 67
Query: 64 DSLPESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGV 123
SLP DCRYA+YD DFV+++NC+KSKIFF++WSPSVSRIRAK +YA S+ +FR ELDGV
Sbjct: 68 ASLPADDCRYAVYDLDFVSDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGV 127
Query: 124 HYEIQATDPSELDIELLRERAH 145
H+EIQATDP ++D+E+LR RA+
Sbjct: 128 HFEIQATDPDDMDLEVLRGRAN 149
>Os02g0663800 Similar to Actin-depolymerizing factor (ADF)
Length = 139
Score = 186 bits (471), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 114/137 (83%)
Query: 8 ANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLP 67
+N++SG+ V ECK FLEL+ K+S R+++FKI++K ++VVV++ G ES+DDF LP
Sbjct: 2 SNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP 61
Query: 68 ESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEI 127
+CRYA++DFDFVT+ENCQKSKIFF++W+P SR+R+KMLYA+SK+RF+RELDG+ E+
Sbjct: 62 ADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVEL 121
Query: 128 QATDPSELDIELLRERA 144
QATDPSE+ +++++ RA
Sbjct: 122 QATDPSEMSMDIVKSRA 138
>Os04g0555700 Similar to Actin-depolymerizing factor (ADF)
Length = 139
Score = 185 bits (470), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 77/137 (56%), Positives = 114/137 (83%)
Query: 8 ANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLP 67
AN++SG+ V ECK F EL+ K+S R++ FKID++ ++VVV++ G +++DDF S+P
Sbjct: 2 ANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP 61
Query: 68 ESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEI 127
S+CRYA++DFDFVT+ENCQKSKIFF++WSP S++R+KMLYA+SK+RF+RELDG+ E+
Sbjct: 62 ASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVEL 121
Query: 128 QATDPSELDIELLRERA 144
QATDPSE+ +++++ RA
Sbjct: 122 QATDPSEMSMDIVKARA 138
>Os07g0484200 Similar to Actin-depolymerizing factor 1 (ADF 1) (ZmABP1) (ZmADF1)
Length = 139
Score = 185 bits (469), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 109/138 (78%)
Query: 8 ANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLP 67
AN++SG+ V ECK F EL+ ++ R+++FKIDDK E+ VE+ G + E ++DF +LP
Sbjct: 2 ANSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLP 61
Query: 68 ESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEI 127
+CRYA+YD DFVT+ENCQKSKIFF +WSP +R R+KMLYA+SK+RFRRELDG+ EI
Sbjct: 62 ADECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEI 121
Query: 128 QATDPSELDIELLRERAH 145
QATDPSE+ ++++R RAH
Sbjct: 122 QATDPSEMSLDIIRARAH 139
>Os03g0243100 Similar to Actin-depolymerizing factor 5 (ADF-5) (AtADF5)
Length = 143
Score = 178 bits (452), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 108/136 (79%)
Query: 10 ASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPES 69
A+ G+ V EC++ F+E++ KK HR+V++KID++ + V+V+K G E +++ + +LP
Sbjct: 8 ATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTD 67
Query: 70 DCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEIQA 129
DCRYA++DFDFVT +NCQKSKIFF+AWSP+ SRIRAK+LYATSK+ RR LDGVHYE+QA
Sbjct: 68 DCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHYEVQA 127
Query: 130 TDPSELDIELLRERAH 145
TD SE+ +++R RA
Sbjct: 128 TDSSEMGYDVIRGRAQ 143
>Os05g0113400 Similar to Actin-depolymerizing factor 2 (ADF 2)
Length = 138
Score = 177 bits (449), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 84/138 (60%), Positives = 116/138 (84%)
Query: 8 ANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLP 67
ANA+SG+ V ECK FLEL+ K+++R++I+KID+K K VVVEK G ++DDF SLP
Sbjct: 1 ANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP 60
Query: 68 ESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEI 127
++CRYAI+D+DFVTEENCQKSKIFF+AWSP SR+R+KM+YA+SK+RF+RELDG+ E+
Sbjct: 61 ANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 120
Query: 128 QATDPSELDIELLRERAH 145
QATDP+E+ ++++R RA+
Sbjct: 121 QATDPTEVGLDVIRGRAN 138
>Os03g0820600 Similar to Actin-depolymerizing factor 3 (ADF 3) (ZmABP3) (ZmADF3)
Length = 139
Score = 168 bits (426), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 105/136 (77%)
Query: 8 ANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLP 67
AN+SSG+ + +CK F ELQ K+ HR++ F +D+K KE++V+K G T S++DF SLP
Sbjct: 2 ANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLP 61
Query: 68 ESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEI 127
E DCR+AIYDFDF+T E+ KS+IF++ WSP +++R+KMLYA+S ERF++EL+G+ E+
Sbjct: 62 EGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEV 121
Query: 128 QATDPSELDIELLRER 143
QATD E+ ++ L++R
Sbjct: 122 QATDAGEISLDALKDR 137
>AK105744
Length = 139
Score = 168 bits (426), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 105/136 (77%)
Query: 8 ANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLP 67
AN+SSG+ + +CK F ELQ K+ HR++ F +D+K KE++V+K G T S++DF SLP
Sbjct: 2 ANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLP 61
Query: 68 ESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEI 127
E DCR+AIYDFDF+T E+ KS+IF++ WSP +++R+KMLYA+S ERF++EL+G+ E+
Sbjct: 62 EGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEV 121
Query: 128 QATDPSELDIELLRER 143
QATD E+ ++ L++R
Sbjct: 122 QATDAGEISLDALKDR 137
>Os07g0297500
Length = 169
Score = 167 bits (424), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 105/138 (76%), Gaps = 4/138 (2%)
Query: 8 ANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLP 67
+ + I V + K F EL R+K HRYVIFKIDD+ +E+VVEKTG+ ES+DDF SLP
Sbjct: 34 GGSPAWIEVPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASLP 93
Query: 68 ESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEI 127
A+YD DFV+++NC+KSKIFF++WSPS+S IRAK +YA + +FR ELDGVH+EI
Sbjct: 94 AD----AVYDLDFVSDDNCRKSKIFFISWSPSLSCIRAKTIYAVWRNQFRHELDGVHFEI 149
Query: 128 QATDPSELDIELLRERAH 145
QATDP ++D+E+LR RA+
Sbjct: 150 QATDPDDMDLEVLRGRAN 167
>Os03g0820500 Similar to WCOR719
Length = 150
Score = 150 bits (380), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 100/146 (68%), Gaps = 11/146 (7%)
Query: 8 ANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLP 67
ANA+SG+ V+ ECK F EL+ ++HR+V+FKIDD ++VVV++ G FD+ SLP
Sbjct: 2 ANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLP 61
Query: 68 ESDCRYAIYDFDFVTEE-----------NCQKSKIFFVAWSPSVSRIRAKMLYATSKERF 116
CRYA+YD DF + +SKIFFV+WSP+ + +R+KM+YA+S E F
Sbjct: 62 ADGCRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEGF 121
Query: 117 RRELDGVHYEIQATDPSELDIELLRE 142
++ELDGV ++QATDPSEL +++L++
Sbjct: 122 KKELDGVQIDLQATDPSELTLDVLKD 147
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.133 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,458,436
Number of extensions: 163279
Number of successful extensions: 371
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 369
Number of HSP's successfully gapped: 12
Length of query: 145
Length of database: 17,035,801
Length adjustment: 91
Effective length of query: 54
Effective length of database: 12,284,327
Effective search space: 663353658
Effective search space used: 663353658
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 151 (62.8 bits)