Os03g0820500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to WCOR719.
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Os03g0820500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to WCOR719.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 392.14 | 0.93 | 9.57 | -2.44 | 4.19 | 1.66 | 1.42 | 1.08 | -0.714 | 8.99 | 71.03 | 1181 | -- | -- |
| 394.78 | 0.925 | 9.57 | -2.52 | 4.19 | 1.72 | 1.41 | -- | -0.713 | 8.98 | 71 | 1184 | -- | -- |
| 397.81 | 0.929 | 9.58 | -2.37 | 4.19 | 1.7 | -- | 1.18 | -0.705 | 8.99 | 73.04 | 1195 | -- | -- |
| 399.42 | 0.931 | 9.59 | -2.56 | 4.17 | 1.7 | -- | -- | -0.759 | 8.99 | 71 | 1189 | -- | -- |
| 1253.84 | 1.65 | 9.68 | -2.29 | -- | 2.43 | -- | 1.32 | -0.626 | -- | 76.46 | 1426 | -- | -- |
| 492.3 | 1.04 | 9.55 | -2.25 | 3.91 | -- | 1.01 | -- | -0.523 | 8.63 | -- | -- | -- | -- |
| 495.65 | 1.04 | 9.55 | -2.22 | 3.91 | -- | -- | -- | -0.523 | 8.64 | -- | -- | -- | -- |
| 1251.14 | 1.65 | 9.67 | -2.39 | -- | 2.82 | -- | -- | -0.618 | -- | 77 | 1430 | -- | -- |
| 495.75 | 1.04 | 9.44 | -- | 3.89 | 2.19 | -- | -- | -0.0391 | 8.64 | 59.85 | 47520 | -- | -- |
| 1355.32 | 1.72 | 9.65 | -2.21 | -- | -- | -- | -- | -0.489 | -- | -- | -- | -- | -- |
| 625.58 | 1.17 | 9.49 | -- | 3.9 | -- | -- | -- | -0.276 | 8.68 | -- | -- | -- | -- |
| 1346.36 | 1.71 | 9.51 | -- | -- | 2.22 | -- | -- | 0.125 | -- | 55.5 | 47520 | -- | -- |
| 1484.09 | 1.8 | 9.59 | -- | -- | -- | -- | -- | -0.244 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 399.24 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 20 | 20 |
| 9 | 400.56 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 9 | NA |
| 10 | 400.67 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 5 | NA |
| 12 | 400.84 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 42 | 402.75 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 63 | 403.77 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 64 | 403.81 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 85 | 404.72 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 2 | 14 |
| 93 | 404.90 | humidity | 80.0 | 720 | < th | dose independent | rect. | 19 | 1 |
| 94 | 405.09 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 95 | 405.10 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 96 | 405.13 | humidity | 90.0 | 1440 | < th | dose dependent | no | NA | NA |
| 106 | 405.26 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 116 | 405.49 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 123 | 405.64 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 23 | 17 |
| 141 | 405.95 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 20 | 20 |
| 177 | 406.56 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 19 | 15 |
| 182 | 406.58 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 3 | NA |
| 267 | 408.01 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 284 | 408.19 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 7 |
| 361 | 408.99 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 10 |
| 409 | 409.38 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 7 | 23 |
| 429 | 409.51 | humidity | 50.0 | 1440 | > th | dose dependent | no | NA | NA |
| 443 | 409.64 | humidity | 80.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 469 | 409.88 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 470 | 409.89 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 473 | 409.91 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 476 | 409.95 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 15 | 11 |
| 505 | 410.17 | humidity | 80.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 506 | 410.17 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 508 | 410.17 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 529 | 410.38 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 655 | 411.27 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 19 | 23 |
| 664 | 411.33 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 20 | 20 |
| 678 | 411.43 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 744 | 411.86 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 746 | 411.87 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 17 | 21 |
| 817 | 412.30 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 831 | 412.38 | humidity | 70.0 | 1440 | < th | dose independent | no | NA | NA |
| 914 | 412.50 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 21 |
| 939 | 412.63 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 940 | 412.63 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 950 | 412.68 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 18 |
| 987 | 412.86 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 8 |
| 990 | 412.87 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 16 |