BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0820500 Os03g0820500|J065073D04
(150 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G59890.1 | chr5:24122545-24123596 FORWARD LENGTH=140 167 1e-42
AT1G01750.1 | chr1:275528-276126 FORWARD LENGTH=141 167 2e-42
AT5G59880.1 | chr5:24120382-24121628 FORWARD LENGTH=140 166 4e-42
AT4G00680.1 | chr4:279780-280608 REVERSE LENGTH=141 164 2e-41
AT3G46010.2 | chr3:16909679-16910678 REVERSE LENGTH=151 163 3e-41
AT5G52360.1 | chr5:21258157-21259229 REVERSE LENGTH=138 160 3e-40
AT4G25590.1 | chr4:13059137-13060050 REVERSE LENGTH=138 159 4e-40
AT3G46000.1 | chr3:16907743-16908822 REVERSE LENGTH=138 158 1e-39
AT4G34970.1 | chr4:16653784-16654593 FORWARD LENGTH=142 140 4e-34
AT2G16700.1 | chr2:7244717-7245467 FORWARD LENGTH=144 135 7e-33
AT2G31200.1 | chr2:13294171-13294948 FORWARD LENGTH=147 134 2e-32
AT3G45990.1 | chr3:16900778-16904136 REVERSE LENGTH=134 108 9e-25
>AT5G59890.1 | chr5:24122545-24123596 FORWARD LENGTH=140
Length = 139
Score = 167 bits (424), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 107/150 (71%), Gaps = 11/150 (7%)
Query: 1 MANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASL 60
MANA SG+AV ++CK RF EL+A R HRF+V+KI++ +QV+V++VG +++ ASL
Sbjct: 1 MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60
Query: 61 PADGCRYAVYDHDFTVSDXXXXXXXXXXXXXPRSKIFFVSWSPAAADVRSKMVYASSNEG 120
PAD CRYA+YD DF ++ +SKIFF++W P A VRSKM+YASS +
Sbjct: 61 PADECRYAIYDFDFVTAENCQ-----------KSKIFFIAWCPDVAKVRSKMIYASSKDR 109
Query: 121 FKKELDGVQIDLQATDPSELTLDVLKDHTS 150
FK+ELDG+Q++LQATDP+E+ LDVLK +
Sbjct: 110 FKRELDGIQVELQATDPTEMDLDVLKSRVN 139
>AT1G01750.1 | chr1:275528-276126 FORWARD LENGTH=141
Length = 140
Score = 167 bits (422), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 109/146 (74%), Gaps = 11/146 (7%)
Query: 1 MANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASL 60
MAN+ SG+ VS+ECK +F EL+A R +RF+VFKID+ +QV++D++G + +++ T S+
Sbjct: 1 MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60
Query: 61 PADGCRYAVYDHDFTVSDXXXXXXXXXXXXXPRSKIFFVSWSPAAADVRSKMVYASSNEG 120
P D CRYAVYD+DFT + +SKIFF++WSP + VRSKM+YASS +
Sbjct: 61 PEDECRYAVYDYDFTTPENCQ-----------KSKIFFIAWSPDTSRVRSKMLYASSKDR 109
Query: 121 FKKELDGVQIDLQATDPSELTLDVLK 146
FK+ELDG+Q++LQATDPSE++LD++K
Sbjct: 110 FKRELDGIQVELQATDPSEMSLDIIK 135
>AT5G59880.1 | chr5:24120382-24121628 FORWARD LENGTH=140
Length = 139
Score = 166 bits (421), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 76/146 (52%), Positives = 106/146 (72%), Gaps = 11/146 (7%)
Query: 1 MANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASL 60
MANA SG+AV ++CK +F EL+ R HRF+++KI++ +QV+V+++G ++L ASL
Sbjct: 1 MANAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASL 60
Query: 61 PADGCRYAVYDHDFTVSDXXXXXXXXXXXXXPRSKIFFVSWSPAAADVRSKMVYASSNEG 120
PAD CRYA++D DF S+ PRS+IFFV+WSP A VRSKM+YASS +
Sbjct: 61 PADECRYAIFDFDFVSSE-----------GVPRSRIFFVAWSPDTARVRSKMIYASSKDR 109
Query: 121 FKKELDGVQIDLQATDPSELTLDVLK 146
FK+ELDG+Q++LQATDP+E+ LDV K
Sbjct: 110 FKRELDGIQVELQATDPTEMDLDVFK 135
>AT4G00680.1 | chr4:279780-280608 REVERSE LENGTH=141
Length = 140
Score = 164 bits (415), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 73/146 (50%), Positives = 108/146 (73%), Gaps = 11/146 (7%)
Query: 1 MANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASL 60
MAN+ SG+ V++ECK +F EL+A R +RF+VFKID+ +QV ++++G + +D+ T+S+
Sbjct: 1 MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60
Query: 61 PADGCRYAVYDHDFTVSDXXXXXXXXXXXXXPRSKIFFVSWSPAAADVRSKMVYASSNEG 120
P D CRYAVYD DFT D +SKIFF++WSP + VRSKM+YASS +
Sbjct: 61 PDDECRYAVYDFDFTTEDNCQ-----------KSKIFFIAWSPDTSRVRSKMLYASSKDR 109
Query: 121 FKKELDGVQIDLQATDPSELTLDVLK 146
FK+E++G+Q++LQATDPSE++LD++K
Sbjct: 110 FKREMEGIQVELQATDPSEMSLDIIK 135
>AT3G46010.2 | chr3:16909679-16910678 REVERSE LENGTH=151
Length = 150
Score = 163 bits (412), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 103/145 (71%), Gaps = 11/145 (7%)
Query: 2 ANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLP 61
ANA SG+AV ++CK RF EL+A R HRF+V+KI++ +QVVV++VG ++E A LP
Sbjct: 13 ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 72
Query: 62 ADGCRYAVYDHDFTVSDXXXXXXXXXXXXXPRSKIFFVSWSPAAADVRSKMVYASSNEGF 121
AD CRYA+YD DF ++ +SKIFF++W P A VRSKM+YASS + F
Sbjct: 73 ADECRYAIYDFDFVTAENCQ-----------KSKIFFIAWCPDIAKVRSKMIYASSKDRF 121
Query: 122 KKELDGVQIDLQATDPSELTLDVLK 146
K+ELDG+Q++LQATDP+E+ LDV +
Sbjct: 122 KRELDGIQVELQATDPTEMDLDVFR 146
>AT5G52360.1 | chr5:21258157-21259229 REVERSE LENGTH=138
Length = 137
Score = 160 bits (404), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 106/146 (72%), Gaps = 13/146 (8%)
Query: 1 MANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASL 60
MANA SG+AV +ECK +F EL+A R +RF++F+ID +QVVV+++G +D+ T L
Sbjct: 1 MANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDG--QQVVVEKLGSPQENYDDFTNYL 58
Query: 61 PADGCRYAVYDHDFTVSDXXXXXXXXXXXXXPRSKIFFVSWSPAAADVRSKMVYASSNEG 120
P + CRYAVYD DFT ++ +SKIFF++WSP ++ VR KMVYASS +
Sbjct: 59 PPNECRYAVYDFDFTTAENIQ-----------KSKIFFIAWSPDSSRVRMKMVYASSKDR 107
Query: 121 FKKELDGVQIDLQATDPSELTLDVLK 146
FK+ELDG+Q++LQATDPSE++LD++K
Sbjct: 108 FKRELDGIQVELQATDPSEMSLDIIK 133
>AT4G25590.1 | chr4:13059137-13060050 REVERSE LENGTH=138
Length = 137
Score = 159 bits (403), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 107/146 (73%), Gaps = 13/146 (8%)
Query: 1 MANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASL 60
MANA SG+AV +ECK +F EL++ R +RF++F+ID +QVVV+++G D +D+ TASL
Sbjct: 1 MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDG--QQVVVEKLGNPDETYDDFTASL 58
Query: 61 PADGCRYAVYDHDFTVSDXXXXXXXXXXXXXPRSKIFFVSWSPAAADVRSKMVYASSNEG 120
PA+ CRYAV+D DF + +SKIFF++WSP ++ VR KMVYASS +
Sbjct: 59 PANECRYAVFDFDFITDENCQ-----------KSKIFFIAWSPDSSRVRMKMVYASSKDR 107
Query: 121 FKKELDGVQIDLQATDPSELTLDVLK 146
FK+ELDG+Q++LQATDPSE++ D++K
Sbjct: 108 FKRELDGIQVELQATDPSEMSFDIIK 133
>AT3G46000.1 | chr3:16907743-16908822 REVERSE LENGTH=138
Length = 137
Score = 158 bits (399), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 105/150 (70%), Gaps = 13/150 (8%)
Query: 1 MANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASL 60
MANA SG+AV ++CK +F EL+A R R +V+KI+D +QV+V+++G + +D+ ASL
Sbjct: 1 MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIED--KQVIVEKLGEPEQSYDDFAASL 58
Query: 61 PADGCRYAVYDHDFTVSDXXXXXXXXXXXXXPRSKIFFVSWSPAAADVRSKMVYASSNEG 120
PAD CRY +YD DF ++ +SKIFF++WSP A VR KM+YASS +
Sbjct: 59 PADDCRYCIYDFDFVTAENCQ-----------KSKIFFIAWSPDTAKVRDKMIYASSKDR 107
Query: 121 FKKELDGVQIDLQATDPSELTLDVLKDHTS 150
FK+ELDG+Q++LQATDP+E+ LDV K T+
Sbjct: 108 FKRELDGIQVELQATDPTEMGLDVFKSRTN 137
>AT4G34970.1 | chr4:16653784-16654593 FORWARD LENGTH=142
Length = 141
Score = 140 bits (352), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 96/147 (65%), Gaps = 11/147 (7%)
Query: 1 MANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASL 60
+ ATSG+ ++++CK F E++ + HR+VV+K+++ R+V VD+VG +D+L ASL
Sbjct: 3 LKTATSGMWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASL 62
Query: 61 PADGCRYAVYDHDFTVSDXXXXXXXXXXXXXPRSKIFFVSWSPAAADVRSKMVYASSNEG 120
P D CRYAV+D D+ D SKIFF++WSP A+ +R KM+YA+S G
Sbjct: 63 PEDDCRYAVFDFDYVTVDNCRM-----------SKIFFITWSPEASRIREKMMYATSKSG 111
Query: 121 FKKELDGVQIDLQATDPSELTLDVLKD 147
++ LDGV +LQATDP+E+ D ++D
Sbjct: 112 LRRVLDGVHYELQATDPTEMGFDKIQD 138
>AT2G16700.1 | chr2:7244717-7245467 FORWARD LENGTH=144
Length = 143
Score = 135 bits (340), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 97/144 (67%), Gaps = 11/144 (7%)
Query: 4 ATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPAD 63
AT+G+ V++EC + F +++ + HR++VFKI++ R+V VD+VG + +L SLP D
Sbjct: 8 ATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVD 67
Query: 64 GCRYAVYDHDFTVSDXXXXXXXXXXXXXPRSKIFFVSWSPAAADVRSKMVYASSNEGFKK 123
CRYAV+D DF D +SKIFF++WSP A+ +R+K++YA+S +G ++
Sbjct: 68 DCRYAVFDFDFVTVDNCR-----------KSKIFFIAWSPEASKIRAKILYATSKDGLRR 116
Query: 124 ELDGVQIDLQATDPSELTLDVLKD 147
L+G+ +LQATDP+E+ D+++D
Sbjct: 117 VLEGIHYELQATDPTEMGFDIIQD 140
>AT2G31200.1 | chr2:13294171-13294948 FORWARD LENGTH=147
Length = 146
Score = 134 bits (337), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 97/145 (66%), Gaps = 11/145 (7%)
Query: 3 NATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPA 62
NA SG+ V++E K F EL+ + HR+VVFKID++ ++VVV++ G +D+ ASLP
Sbjct: 10 NAISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPD 69
Query: 63 DGCRYAVYDHDFTVSDXXXXXXXXXXXXXPRSKIFFVSWSPAAADVRSKMVYASSNEGFK 122
+ CRYAVYD DF S+ +SKIFF +WSP+ + +R+K++Y++S +
Sbjct: 70 NDCRYAVYDFDFVTSENCQ-----------KSKIFFFAWSPSTSGIRAKVLYSTSKDQLS 118
Query: 123 KELDGVQIDLQATDPSELTLDVLKD 147
+EL G+ ++QATDP+E+ L+VL++
Sbjct: 119 RELQGIHYEIQATDPTEVDLEVLRE 143
>AT3G45990.1 | chr3:16900778-16904136 REVERSE LENGTH=134
Length = 133
Score = 108 bits (271), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 88/145 (60%), Gaps = 22/145 (15%)
Query: 8 VAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRV------GPRDAGFDELTASLP 61
+ + ++CK F EL+ R R +V+KI+D M QV+V++ G R+ ++E SLP
Sbjct: 1 MVLHDDCKLTFLELKERRTFRSIVYKIEDNM-QVIVEKHHYKKMHGEREQSYEEFANSLP 59
Query: 62 ADGCRYAVYDHDFTVSDXXXXXXXXXXXXXPRSKIFFVSWSPAAADVRSKMVYASSNEGF 121
AD CRYA+ D +F + KI F++WSP+ A +R KM+Y+S+ + F
Sbjct: 60 ADECRYAILDIEFVPGE---------------RKICFIAWSPSTAKMRKKMIYSSTKDRF 104
Query: 122 KKELDGVQIDLQATDPSELTLDVLK 146
K+ELDG+Q++ ATD ++++LD ++
Sbjct: 105 KRELDGIQVEFHATDLTDISLDAIR 129
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.132 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,801,780
Number of extensions: 90876
Number of successful extensions: 195
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 179
Number of HSP's successfully gapped: 12
Length of query: 150
Length of database: 11,106,569
Length adjustment: 90
Effective length of query: 60
Effective length of database: 8,639,129
Effective search space: 518347740
Effective search space used: 518347740
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 107 (45.8 bits)