BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0820500 Os03g0820500|J065073D04
(150 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0820500 Similar to WCOR719 276 4e-75
Os04g0555700 Similar to Actin-depolymerizing factor (ADF) 167 4e-42
Os02g0663800 Similar to Actin-depolymerizing factor (ADF) 166 7e-42
Os03g0820600 Similar to Actin-depolymerizing factor 3 (ADF ... 160 3e-40
AK105744 160 3e-40
Os07g0484200 Similar to Actin-depolymerizing factor 1 (ADF ... 160 5e-40
Os12g0628100 Similar to Actin-depolymerizing factor 6 (ADF-... 150 2e-37
Os05g0113400 Similar to Actin-depolymerizing factor 2 (ADF 2) 145 8e-36
Os03g0243100 Similar to Actin-depolymerizing factor 5 (ADF-... 142 1e-34
Os03g0780400 Similar to Actin-depolymerizing factor 6 (ADF-... 132 7e-32
Os10g0521100 Similar to Actin-depolymerizing factor 6 (ADF-... 132 1e-31
Os07g0297500 113 5e-26
>Os03g0820500 Similar to WCOR719
Length = 150
Score = 276 bits (706), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 137/150 (91%), Positives = 137/150 (91%)
Query: 1 MANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASL 60
MANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASL
Sbjct: 1 MANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASL 60
Query: 61 PADGCRYAVYDHDFTVSDXXXXXXXXXXXXXPRSKIFFVSWSPAAADVRSKMVYASSNEG 120
PADGCRYAVYDHDFTVSD PRSKIFFVSWSPAAADVRSKMVYASSNEG
Sbjct: 61 PADGCRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEG 120
Query: 121 FKKELDGVQIDLQATDPSELTLDVLKDHTS 150
FKKELDGVQIDLQATDPSELTLDVLKDHTS
Sbjct: 121 FKKELDGVQIDLQATDPSELTLDVLKDHTS 150
>Os04g0555700 Similar to Actin-depolymerizing factor (ADF)
Length = 139
Score = 167 bits (422), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 77/146 (52%), Positives = 107/146 (73%), Gaps = 11/146 (7%)
Query: 1 MANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASL 60
MAN+ SG+AV +ECK +FQEL++ R+ RF+ FKID+ +QVVVDR+G +D+ TAS+
Sbjct: 1 MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60
Query: 61 PADGCRYAVYDHDFTVSDXXXXXXXXXXXXXPRSKIFFVSWSPAAADVRSKMVYASSNEG 120
PA CRYAV+D DF + +SKIFF+SWSP + VRSKM+YASS +
Sbjct: 61 PASECRYAVFDFDFVTDENCQ-----------KSKIFFISWSPDTSKVRSKMLYASSKDR 109
Query: 121 FKKELDGVQIDLQATDPSELTLDVLK 146
FK+ELDG+Q++LQATDPSE+++D++K
Sbjct: 110 FKRELDGIQVELQATDPSEMSMDIVK 135
>Os02g0663800 Similar to Actin-depolymerizing factor (ADF)
Length = 139
Score = 166 bits (419), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 76/146 (52%), Positives = 108/146 (73%), Gaps = 11/146 (7%)
Query: 1 MANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASL 60
M+N+ SG+AV +ECK +F EL+A R+ RF+VFKI++ ++QVVVDR+G +D+ TA L
Sbjct: 1 MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60
Query: 61 PADGCRYAVYDHDFTVSDXXXXXXXXXXXXXPRSKIFFVSWSPAAADVRSKMVYASSNEG 120
PAD CRYAV+D DF + +SKIFF+SW+P + VRSKM+YASS +
Sbjct: 61 PADECRYAVFDFDFVTDENCQ-----------KSKIFFISWAPDTSRVRSKMLYASSKDR 109
Query: 121 FKKELDGVQIDLQATDPSELTLDVLK 146
FK+ELDG+Q++LQATDPSE+++D++K
Sbjct: 110 FKRELDGIQVELQATDPSEMSMDIVK 135
>Os03g0820600 Similar to Actin-depolymerizing factor 3 (ADF 3) (ZmABP3) (ZmADF3)
Length = 139
Score = 160 bits (405), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 106/147 (72%), Gaps = 11/147 (7%)
Query: 1 MANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASL 60
MAN++SGVA+ ++CK +F EL++ R HRF+ F +D+ ++++VD++G R +++ T+SL
Sbjct: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL 60
Query: 61 PADGCRYAVYDHDFTVSDXXXXXXXXXXXXXPRSKIFFVSWSPAAADVRSKMVYASSNEG 120
P CR+A+YD DF ++ P+S+IF++ WSP A VRSKM+YASSNE
Sbjct: 61 PEGDCRFAIYDFDFLTAE-----------DVPKSRIFYILWSPDNAKVRSKMLYASSNER 109
Query: 121 FKKELDGVQIDLQATDPSELTLDVLKD 147
FKKEL+G+Q+++QATD E++LD LKD
Sbjct: 110 FKKELNGIQLEVQATDAGEISLDALKD 136
>AK105744
Length = 139
Score = 160 bits (405), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 106/147 (72%), Gaps = 11/147 (7%)
Query: 1 MANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASL 60
MAN++SGVA+ ++CK +F EL++ R HRF+ F +D+ ++++VD++G R +++ T+SL
Sbjct: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL 60
Query: 61 PADGCRYAVYDHDFTVSDXXXXXXXXXXXXXPRSKIFFVSWSPAAADVRSKMVYASSNEG 120
P CR+A+YD DF ++ P+S+IF++ WSP A VRSKM+YASSNE
Sbjct: 61 PEGDCRFAIYDFDFLTAE-----------DVPKSRIFYILWSPDNAKVRSKMLYASSNER 109
Query: 121 FKKELDGVQIDLQATDPSELTLDVLKD 147
FKKEL+G+Q+++QATD E++LD LKD
Sbjct: 110 FKKELNGIQLEVQATDAGEISLDALKD 136
>Os07g0484200 Similar to Actin-depolymerizing factor 1 (ADF 1) (ZmABP1) (ZmADF1)
Length = 139
Score = 160 bits (404), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 103/146 (70%), Gaps = 11/146 (7%)
Query: 1 MANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASL 60
MAN+ SG+AV++ECK +FQEL+ R RF+VFKIDD ++ V+R+G G+++ A+L
Sbjct: 1 MANSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATL 60
Query: 61 PADGCRYAVYDHDFTVSDXXXXXXXXXXXXXPRSKIFFVSWSPAAADVRSKMVYASSNEG 120
PAD CRYAVYD DF + +SKIFF SWSP A RSKM+YASS +
Sbjct: 61 PADECRYAVYDLDFVTDE-----------NCQKSKIFFFSWSPDTARTRSKMLYASSKDR 109
Query: 121 FKKELDGVQIDLQATDPSELTLDVLK 146
F++ELDG+Q ++QATDPSE++LD+++
Sbjct: 110 FRRELDGIQCEIQATDPSEMSLDIIR 135
>Os12g0628100 Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6)
Length = 145
Score = 150 bits (380), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 100/146 (68%), Gaps = 11/146 (7%)
Query: 2 ANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLP 61
ANA+SG+ V+ ECK F EL+ ++HR+V+FKIDD ++VVV++ G FD+ SLP
Sbjct: 8 ANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLP 67
Query: 62 ADGCRYAVYDHDFTVSDXXXXXXXXXXXXXPRSKIFFVSWSPAAADVRSKMVYASSNEGF 121
CRYA+YD DF + +SKIFFV+WSP+ + +R+KM+YA+S E F
Sbjct: 68 ESDCRYAIYDFDFVTEE-----------NCQKSKIFFVAWSPSVSRIRAKMLYATSKERF 116
Query: 122 KKELDGVQIDLQATDPSELTLDVLKD 147
++ELDGV ++QATDPSEL +++L++
Sbjct: 117 RRELDGVHYEIQATDPSELDIELLRE 142
>Os05g0113400 Similar to Actin-depolymerizing factor 2 (ADF 2)
Length = 138
Score = 145 bits (367), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 105/145 (72%), Gaps = 11/145 (7%)
Query: 2 ANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLP 61
ANA SG+AV +ECK +F EL+A R +RF+++KID+ + VVV++VG +D+ ASLP
Sbjct: 1 ANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP 60
Query: 62 ADGCRYAVYDHDFTVSDXXXXXXXXXXXXXPRSKIFFVSWSPAAADVRSKMVYASSNEGF 121
A+ CRYA++D+DF + +SKIFF++WSP + VRSKM+YASS + F
Sbjct: 61 ANECRYAIFDYDFVTEENCQ-----------KSKIFFIAWSPDTSRVRSKMIYASSKDRF 109
Query: 122 KKELDGVQIDLQATDPSELTLDVLK 146
K+ELDG+Q++LQATDP+E+ LDV++
Sbjct: 110 KRELDGIQVELQATDPTEVGLDVIR 134
>Os03g0243100 Similar to Actin-depolymerizing factor 5 (ADF-5) (AtADF5)
Length = 143
Score = 142 bits (357), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 96/143 (67%), Gaps = 11/143 (7%)
Query: 4 ATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPAD 63
AT G+ V EEC+ F E++ + HRFVV+KID+ R V+VD+VG G++EL A+LP D
Sbjct: 8 ATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTD 67
Query: 64 GCRYAVYDHDFTVSDXXXXXXXXXXXXXPRSKIFFVSWSPAAADVRSKMVYASSNEGFKK 123
CRYAV+D DF D +SKIFF++WSP A+ +R+K++YA+S +G ++
Sbjct: 68 DCRYAVFDFDFVTVD-----------NCQKSKIFFIAWSPTASRIRAKILYATSKQGLRR 116
Query: 124 ELDGVQIDLQATDPSELTLDVLK 146
LDGV ++QATD SE+ DV++
Sbjct: 117 VLDGVHYEVQATDSSEMGYDVIR 139
>Os03g0780400 Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6)
Length = 145
Score = 132 bits (333), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 98/146 (67%), Gaps = 11/146 (7%)
Query: 2 ANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLP 61
+NA+SG+ V+ + + F EL+ +A R+V+FKI++ +QVVV++ G +D+ ASLP
Sbjct: 8 SNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLP 67
Query: 62 ADGCRYAVYDHDFTVSDXXXXXXXXXXXXXPRSKIFFVSWSPAAADVRSKMVYASSNEGF 121
+ CRYA+YD DF + +SKIFF++WSP+ + +R+KM+Y++S +
Sbjct: 68 ENDCRYALYDFDFVTGENVQ-----------KSKIFFIAWSPSTSRIRAKMLYSTSKDRI 116
Query: 122 KKELDGVQIDLQATDPSELTLDVLKD 147
K+ELDG ++QATDP+E+ L+VL++
Sbjct: 117 KQELDGFHYEIQATDPTEVDLEVLRE 142
>Os10g0521100 Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6)
Length = 151
Score = 132 bits (331), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 92/145 (63%), Gaps = 11/145 (7%)
Query: 2 ANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLP 61
+ + + V E+ K+ F EL+ + HR+V+FKIDD ++VV++ G +D+ TASLP
Sbjct: 12 GGSPAWIEVPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLP 71
Query: 62 ADGCRYAVYDHDFTVSDXXXXXXXXXXXXXPRSKIFFVSWSPAAADVRSKMVYASSNEGF 121
AD CRYAVYD DF D +SKIFF+SWSP+ + +R+K +YA S F
Sbjct: 72 ADDCRYAVYDLDFVSDDNCR-----------KSKIFFISWSPSVSRIRAKTIYAVSRNQF 120
Query: 122 KKELDGVQIDLQATDPSELTLDVLK 146
+ ELDGV ++QATDP ++ L+VL+
Sbjct: 121 RHELDGVHFEIQATDPDDMDLEVLR 145
>Os07g0297500
Length = 169
Score = 113 bits (283), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 87/145 (60%), Gaps = 15/145 (10%)
Query: 2 ANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLP 61
+ + + V E+ K+ F EL + HR+V+FKIDD ++VV++ G +D+ TASLP
Sbjct: 34 GGSPAWIEVPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASLP 93
Query: 62 ADGCRYAVYDHDFTVSDXXXXXXXXXXXXXPRSKIFFVSWSPAAADVRSKMVYASSNEGF 121
AD AVYD DF D +SKIFF+SWSP+ + +R+K +YA F
Sbjct: 94 AD----AVYDLDFVSDDNCR-----------KSKIFFISWSPSLSCIRAKTIYAVWRNQF 138
Query: 122 KKELDGVQIDLQATDPSELTLDVLK 146
+ ELDGV ++QATDP ++ L+VL+
Sbjct: 139 RHELDGVHFEIQATDPDDMDLEVLR 163
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.132 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,537,478
Number of extensions: 153519
Number of successful extensions: 287
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 276
Number of HSP's successfully gapped: 12
Length of query: 150
Length of database: 17,035,801
Length adjustment: 92
Effective length of query: 58
Effective length of database: 12,232,113
Effective search space: 709462554
Effective search space used: 709462554
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 151 (62.8 bits)