Os12g0628100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6).
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Os12g0628100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.62 | 0.478 | 12.5 | -0.671 | 3.1 | -2.32 | 0.869 | -4.49 | -0.504 | 9 | 1.169 | 1485 | -- | -- |
| 110.68 | 0.49 | 12.6 | -0.784 | 3.07 | -1.42 | 1.32 | -- | -0.6 | 9.01 | 3.511 | 1514 | -- | -- |
| 105.8 | 0.479 | 12.5 | -0.613 | 3.06 | -2.38 | -- | -4.81 | -0.501 | 8.9 | 1.17 | 1499 | -- | -- |
| 115.07 | 0.5 | 12.6 | -0.977 | 3.17 | -1.45 | -- | -- | -0.61 | 9.04 | 3.109 | 1483 | -- | -- |
| 363.11 | 0.892 | 12.6 | -0.797 | -- | -1.92 | -- | -0.539 | -0.425 | -- | 2.617 | 1583 | -- | -- |
| 136.18 | 0.547 | 12.5 | -0.812 | 3.28 | -- | 1.2 | -- | -0.392 | 9.18 | -- | -- | -- | -- |
| 141.29 | 0.557 | 12.5 | -0.77 | 3.28 | -- | -- | -- | -0.391 | 9.17 | -- | -- | -- | -- |
| 364.26 | 0.893 | 12.6 | -0.79 | -- | -1.93 | -- | -- | -0.437 | -- | 3.109 | 1483 | -- | -- |
| 137.84 | 0.547 | 12.6 | -- | 3.26 | -0.906 | -- | -- | -0.595 | 9.14 | 8.975 | 7289 | -- | -- |
| 763.47 | 1.29 | 12.6 | -0.78 | -- | -- | -- | -- | -0.374 | -- | -- | -- | -- | -- |
| 156.9 | 0.586 | 12.5 | -- | 3.28 | -- | -- | -- | -0.305 | 9.19 | -- | -- | -- | -- |
| 380.71 | 0.912 | 12.6 | -- | -- | -1.93 | -- | -- | -0.349 | -- | 3.109 | 1483 | -- | -- |
| 779.51 | 1.3 | 12.6 | -- | -- | -- | -- | -- | -0.288 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 101.57 | humidity | 80 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 2 | 101.65 | humidity | 70 | 43200 | > th | dose dependent | rect. | 10 | 15 |
| 3 | 101.74 | humidity | 80 | 43200 | > th | dose dependent | rect. | 19 | 5 |
| 5 | 101.78 | temperature | 30 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 6 | 101.83 | humidity | 80 | 43200 | > th | dose dependent | rect. | 13 | 14 |
| 7 | 101.87 | humidity | 80 | 43200 | > th | dose dependent | rect. | 14 | 12 |
| 20 | 102.26 | humidity | 80 | 43200 | > th | dose dependent | sin | 16 | NA |
| 22 | 102.29 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 5 |
| 29 | 102.34 | temperature | 30 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 31 | 102.35 | temperature | 30 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 37 | 102.37 | humidity | 80 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 65 | 102.46 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 9 |
| 79 | 102.47 | humidity | 70 | 43200 | > th | dose dependent | sin | 19 | NA |
| 160 | 102.56 | temperature | 25 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 163 | 102.57 | temperature | 30 | 14400 | < th | dose independent | sin | 18 | NA |
| 276 | 102.63 | temperature | 30 | 43200 | > th | dose dependent | sin | 6 | NA |
| 286 | 102.66 | temperature | 30 | 14400 | > th | dose independent | sin | 18 | NA |
| 355 | 102.72 | temperature | 30 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 362 | 102.73 | temperature | 30 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 465 | 102.80 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 19 |
| 469 | 102.81 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 704 | 102.90 | temperature | 30 | 43200 | > th | dose dependent | no | NA | NA |
| 800 | 102.92 | temperature | 30 | 43200 | > th | dose independent | sin | 5 | NA |
| 835 | 102.93 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 949 | 102.95 | temperature | 30 | 43200 | < th | dose independent | sin | 5 | NA |
| 989 | 102.99 | temperature | 30 | 43200 | > th | dose dependent | rect. | 14 | 23 |