BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0628100 Os12g0628100|AK121150
(145 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G31200.1 | chr2:13294171-13294948 FORWARD LENGTH=147 226 2e-60
AT5G59890.1 | chr5:24122545-24123596 FORWARD LENGTH=140 188 8e-49
AT1G01750.1 | chr1:275528-276126 FORWARD LENGTH=141 188 8e-49
AT3G46010.2 | chr3:16909679-16910678 REVERSE LENGTH=151 187 1e-48
AT4G00680.1 | chr4:279780-280608 REVERSE LENGTH=141 187 1e-48
AT4G25590.1 | chr4:13059137-13060050 REVERSE LENGTH=138 186 5e-48
AT5G52360.1 | chr5:21258157-21259229 REVERSE LENGTH=138 183 2e-47
AT4G34970.1 | chr4:16653784-16654593 FORWARD LENGTH=142 178 9e-46
AT2G16700.1 | chr2:7244717-7245467 FORWARD LENGTH=144 178 1e-45
AT3G46000.1 | chr3:16907743-16908822 REVERSE LENGTH=138 177 2e-45
AT5G59880.1 | chr5:24120382-24121628 FORWARD LENGTH=140 172 5e-44
AT3G45990.1 | chr3:16900778-16904136 REVERSE LENGTH=134 116 4e-27
>AT2G31200.1 | chr2:13294171-13294948 FORWARD LENGTH=147
Length = 146
Score = 226 bits (577), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 124/140 (88%)
Query: 6 SRANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDS 65
SR NA SG+GVA E K TFLELQRKK+HRYV+FKID+ KEVVVEKTG+ TES+DDF+ S
Sbjct: 7 SRPNAISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLAS 66
Query: 66 LPESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHY 125
LP++DCRYA+YDFDFVT ENCQKSKIFF AWSPS S IRAK+LY+TSK++ REL G+HY
Sbjct: 67 LPDNDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHY 126
Query: 126 EIQATDPSELDIELLRERAH 145
EIQATDP+E+D+E+LRERA+
Sbjct: 127 EIQATDPTEVDLEVLRERAN 146
>AT5G59890.1 | chr5:24122545-24123596 FORWARD LENGTH=140
Length = 139
Score = 188 bits (478), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 115/138 (83%)
Query: 8 ANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLP 67
ANA+SG+ V +CK FLEL+ K++HR++++KI++K K+V+VEK G +++DF SLP
Sbjct: 2 ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLP 61
Query: 68 ESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEI 127
+CRYAIYDFDFVT ENCQKSKIFF+AW P V+++R+KM+YA+SK+RF+RELDG+ E+
Sbjct: 62 ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVEL 121
Query: 128 QATDPSELDIELLRERAH 145
QATDP+E+D+++L+ R +
Sbjct: 122 QATDPTEMDLDVLKSRVN 139
>AT1G01750.1 | chr1:275528-276126 FORWARD LENGTH=141
Length = 140
Score = 188 bits (478), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 77/138 (55%), Positives = 117/138 (84%)
Query: 8 ANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLP 67
AN++SG+ V+ ECK FLEL+ K+++R+++FKID+K ++V+++K G+ E+++DF S+P
Sbjct: 2 ANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIP 61
Query: 68 ESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEI 127
E +CRYA+YD+DF T ENCQKSKIFF+AWSP SR+R+KMLYA+SK+RF+RELDG+ E+
Sbjct: 62 EDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVEL 121
Query: 128 QATDPSELDIELLRERAH 145
QATDPSE+ +++++ R +
Sbjct: 122 QATDPSEMSLDIIKGRVN 139
>AT3G46010.2 | chr3:16909679-16910678 REVERSE LENGTH=151
Length = 150
Score = 187 bits (476), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 78/138 (56%), Positives = 115/138 (83%)
Query: 8 ANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLP 67
ANA+SG+ V +CK FLEL+ K++HR++++KI++K K+VVVEK G +++++F LP
Sbjct: 13 ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 72
Query: 68 ESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEI 127
+CRYAIYDFDFVT ENCQKSKIFF+AW P ++++R+KM+YA+SK+RF+RELDG+ E+
Sbjct: 73 ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVEL 132
Query: 128 QATDPSELDIELLRERAH 145
QATDP+E+D+++ R RA+
Sbjct: 133 QATDPTEMDLDVFRSRAN 150
>AT4G00680.1 | chr4:279780-280608 REVERSE LENGTH=141
Length = 140
Score = 187 bits (475), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 77/138 (55%), Positives = 116/138 (84%)
Query: 8 ANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLP 67
AN++SG+ V ECK FLEL+ K+++R+++FKID+K ++V +EK G+ E++DDF S+P
Sbjct: 2 ANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIP 61
Query: 68 ESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEI 127
+ +CRYA+YDFDF TE+NCQKSKIFF+AWSP SR+R+KMLYA+SK+RF+RE++G+ E+
Sbjct: 62 DDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVEL 121
Query: 128 QATDPSELDIELLRERAH 145
QATDPSE+ +++++ R +
Sbjct: 122 QATDPSEMSLDIIKGRLN 139
>AT4G25590.1 | chr4:13059137-13060050 REVERSE LENGTH=138
Length = 137
Score = 186 bits (471), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 81/137 (59%), Positives = 114/137 (83%), Gaps = 2/137 (1%)
Query: 8 ANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLP 67
ANA+SG+ V ECK FLEL+ K+++R++IF+ID + +VVVEK G+ E++DDF SLP
Sbjct: 2 ANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQ--QVVVEKLGNPDETYDDFTASLP 59
Query: 68 ESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEI 127
++CRYA++DFDF+T+ENCQKSKIFF+AWSP SR+R KM+YA+SK+RF+RELDG+ E+
Sbjct: 60 ANECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVEL 119
Query: 128 QATDPSELDIELLRERA 144
QATDPSE+ ++++ RA
Sbjct: 120 QATDPSEMSFDIIKSRA 136
>AT5G52360.1 | chr5:21258157-21259229 REVERSE LENGTH=138
Length = 137
Score = 183 bits (465), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 81/137 (59%), Positives = 112/137 (81%), Gaps = 2/137 (1%)
Query: 8 ANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLP 67
ANA+SG+ V ECK FLEL+ K+++R++IF+ID + +VVVEK GS E++DDF + LP
Sbjct: 2 ANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQ--QVVVEKLGSPQENYDDFTNYLP 59
Query: 68 ESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEI 127
++CRYA+YDFDF T EN QKSKIFF+AWSP SR+R KM+YA+SK+RF+RELDG+ E+
Sbjct: 60 PNECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVEL 119
Query: 128 QATDPSELDIELLRERA 144
QATDPSE+ +++++ RA
Sbjct: 120 QATDPSEMSLDIIKSRA 136
>AT4G34970.1 | chr4:16653784-16654593 FORWARD LENGTH=142
Length = 141
Score = 178 bits (451), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 109/136 (80%)
Query: 9 NASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPE 68
A+SG+ + +CK++F+E++ KK HRYV++K+++K ++V V+K G++ ES+DD SLPE
Sbjct: 5 TATSGMWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPE 64
Query: 69 SDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEIQ 128
DCRYA++DFD+VT +NC+ SKIFF+ WSP SRIR KM+YATSK RR LDGVHYE+Q
Sbjct: 65 DDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYELQ 124
Query: 129 ATDPSELDIELLRERA 144
ATDP+E+ + +++RA
Sbjct: 125 ATDPTEMGFDKIQDRA 140
>AT2G16700.1 | chr2:7244717-7245467 FORWARD LENGTH=144
Length = 143
Score = 178 bits (451), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 75/135 (55%), Positives = 110/135 (81%)
Query: 10 ASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPES 69
A++G+ V EC +F++++ KK HRY++FKI++K ++V V+K G + ES+ D DSLP
Sbjct: 8 ATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVD 67
Query: 70 DCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEIQA 129
DCRYA++DFDFVT +NC+KSKIFF+AWSP S+IRAK+LYATSK+ RR L+G+HYE+QA
Sbjct: 68 DCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEGIHYELQA 127
Query: 130 TDPSELDIELLRERA 144
TDP+E+ +++++RA
Sbjct: 128 TDPTEMGFDIIQDRA 142
>AT3G46000.1 | chr3:16907743-16908822 REVERSE LENGTH=138
Length = 137
Score = 177 bits (449), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 77/138 (55%), Positives = 109/138 (78%), Gaps = 2/138 (1%)
Query: 8 ANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLP 67
ANA+SG+ V +CK F+EL+ K++ R +++KI+DK +V+VEK G +S+DDF SLP
Sbjct: 2 ANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDK--QVIVEKLGEPEQSYDDFAASLP 59
Query: 68 ESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEI 127
DCRY IYDFDFVT ENCQKSKIFF+AWSP +++R KM+YA+SK+RF+RELDG+ E+
Sbjct: 60 ADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVEL 119
Query: 128 QATDPSELDIELLRERAH 145
QATDP+E+ +++ + R +
Sbjct: 120 QATDPTEMGLDVFKSRTN 137
>AT5G59880.1 | chr5:24120382-24121628 FORWARD LENGTH=140
Length = 139
Score = 172 bits (437), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 110/138 (79%)
Query: 8 ANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLP 67
ANA+SG+ V +CK F+EL+ K++HR++I+KI++ K+V+VEK G ++ +D SLP
Sbjct: 2 ANAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLP 61
Query: 68 ESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEI 127
+CRYAI+DFDFV+ E +S+IFFVAWSP +R+R+KM+YA+SK+RF+RELDG+ E+
Sbjct: 62 ADECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVEL 121
Query: 128 QATDPSELDIELLRERAH 145
QATDP+E+D+++ + RA+
Sbjct: 122 QATDPTEMDLDVFKSRAN 139
>AT3G45990.1 | chr3:16900778-16904136 REVERSE LENGTH=134
Length = 133
Score = 116 bits (290), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 91/131 (69%), Gaps = 11/131 (8%)
Query: 19 ECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKT------GSSTESFDDFMDSLPESDCR 72
+CK TFLEL+ +++ R +++KI+D +V+VEK G +S+++F +SLP +CR
Sbjct: 6 DCKLTFLELKERRTFRSIVYKIEDNM-QVIVEKHHYKKMHGEREQSYEEFANSLPADECR 64
Query: 73 YAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEIQATDP 132
YAI D +FV E KI F+AWSPS +++R KM+Y+++K+RF+RELDG+ E ATD
Sbjct: 65 YAILDIEFVPGER----KICFIAWSPSTAKMRKKMIYSSTKDRFKRELDGIQVEFHATDL 120
Query: 133 SELDIELLRER 143
+++ ++ +R R
Sbjct: 121 TDISLDAIRRR 131
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.133 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,026,870
Number of extensions: 120131
Number of successful extensions: 345
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 340
Number of HSP's successfully gapped: 12
Length of query: 145
Length of database: 11,106,569
Length adjustment: 89
Effective length of query: 56
Effective length of database: 8,666,545
Effective search space: 485326520
Effective search space used: 485326520
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 107 (45.8 bits)