BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0562500 Os12g0562500|AY224435
(457 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0562500 Similar to Protein kinase-like protein (Fragment) 889 0.0
Os10g0430900 Protein kinase domain containing protein 116 3e-26
Os03g0160100 Similar to EDR1 (Fragment) 113 3e-25
Os02g0743500 Similar to EDR1 111 1e-24
Os02g0527600 Similar to MAP kinase kinase kinase (Fragment) 108 8e-24
Os06g0232100 Protein kinase-like domain containing protein 106 3e-23
Os04g0610900 Similar to EDR1 103 2e-22
Os02g0241600 Protein kinase-like domain containing protein 86 8e-17
Os01g0674100 Protein kinase-like domain containing protein 85 1e-16
Os06g0724900 Amino acid-binding ACT domain containing protein 79 8e-15
Os07g0475900 Amino acid-binding ACT domain containing protein 76 6e-14
Os09g0544300 Amino acid-binding ACT domain containing protein 74 3e-13
>Os12g0562500 Similar to Protein kinase-like protein (Fragment)
Length = 457
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/457 (94%), Positives = 431/457 (94%)
Query: 1 GGGLTEKQYTRVLQSLGQSVHILDLEGKIMYWNRSAEKLYGYPASEALGQDGLMLLIDSC 60
GGGLTEKQYTRVLQSLGQSVHILDLEGKIMYWNRSAEKLYGYPASEALGQDGLMLLIDSC
Sbjct: 1 GGGLTEKQYTRVLQSLGQSVHILDLEGKIMYWNRSAEKLYGYPASEALGQDGLMLLIDSC 60
Query: 61 DINVVNDIFRRISLGESWTGKFPVKNRAGDRFSAVATNTPFYDEDGSLVGIVCVSSDLRT 120
DINVVNDIFRRISLGESWTGKFPVKNRAGDRFSAVATNTPFYDEDGSLVGIVCVSSDLRT
Sbjct: 61 DINVVNDIFRRISLGESWTGKFPVKNRAGDRFSAVATNTPFYDEDGSLVGIVCVSSDLRT 120
Query: 121 MEEIISGPSICARPHPESSRTYCEASCSNSNRKASLLSRSPFDSQQPLQSTIASKITNLA 180
MEEIISGPSICARPHPESSRTYCEASCSNSNRKASLLSRSPFDSQQPLQSTIASKITNLA
Sbjct: 121 MEEIISGPSICARPHPESSRTYCEASCSNSNRKASLLSRSPFDSQQPLQSTIASKITNLA 180
Query: 181 TKVTNKVRSRVRADENGIEREGGSGESHCSDRDAKEEPTSSGTTTPRGDAPRGAFATEES 240
TKVTNKVRSRVRADENGIEREGGSGESHCSDRDAKEEPTSSGTTTPRGDAPRGAFATEES
Sbjct: 181 TKVTNKVRSRVRADENGIEREGGSGESHCSDRDAKEEPTSSGTTTPRGDAPRGAFATEES 240
Query: 241 SPGKTAKMNSDESEGKVGFHRILSSKAEALLNKKGISWPWKGRDNDGPDVKNQATWPWLH 300
SPGKTAKMNSDESEGKVGFHRILSSKAEALLNKKGISWPWKGRDNDGPDVKNQATWPWLH
Sbjct: 241 SPGKTAKMNSDESEGKVGFHRILSSKAEALLNKKGISWPWKGRDNDGPDVKNQATWPWLH 300
Query: 301 GEQDGSQNHQKISDSAITQDGQGAEYNQPNKNEXXXXXXXXXXXXXXXXXXXXXXXXXXL 360
GEQDGSQNHQKISDSAITQDGQGAEYNQPNKNE L
Sbjct: 301 GEQDGSQNHQKISDSAITQDGQGAEYNQPNKNEASGSWSSFNNNSTSSASSTGSTNSSAL 360
Query: 361 YKVDHEADCLDYEILWEDLVIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEEVIQT 420
YKVDHEADCLDYEILWEDLVIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEEVIQT
Sbjct: 361 YKVDHEADCLDYEILWEDLVIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEEVIQT 420
Query: 421 FRQEVSLMKKLRHPNILLFMGAVTSPQRLCIVTEFLP 457
FRQEVSLMKKLRHPNILLFMGAVTSPQRLCIVTEFLP
Sbjct: 421 FRQEVSLMKKLRHPNILLFMGAVTSPQRLCIVTEFLP 457
>Os10g0430900 Protein kinase domain containing protein
Length = 972
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 66/85 (77%)
Query: 373 EILWEDLVIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEEVIQTFRQEVSLMKKLR 432
EILWEDL+IGE+IG GS G VYHA W G++VAVK F QE+ + + FR EV +M++LR
Sbjct: 687 EILWEDLLIGERIGLGSYGEVYHADWNGTEVAVKKFLDQEFYGDALAEFRCEVRIMRRLR 746
Query: 433 HPNILLFMGAVTSPQRLCIVTEFLP 457
HPNI+LFMGAVT P L IV+E+LP
Sbjct: 747 HPNIVLFMGAVTRPPHLSIVSEYLP 771
>Os03g0160100 Similar to EDR1 (Fragment)
Length = 1017
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 66/90 (73%)
Query: 368 DCLDYEILWEDLVIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEEVIQTFRQEVSL 427
D + EI WEDLVIGE+IG GS G VY A W G++VAVK F Q++ + + FR EV +
Sbjct: 724 DVSECEIHWEDLVIGERIGLGSYGEVYRADWNGTEVAVKKFLDQDFYGDALDEFRSEVRI 783
Query: 428 MKKLRHPNILLFMGAVTSPQRLCIVTEFLP 457
M++LRHPNI+LFMGAVT P L IV+E+LP
Sbjct: 784 MRRLRHPNIVLFMGAVTRPPNLSIVSEYLP 813
>Os02g0743500 Similar to EDR1
Length = 991
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 67/90 (74%)
Query: 368 DCLDYEILWEDLVIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEEVIQTFRQEVSL 427
D ++EI WE++ IGE+IG GS G VY W+G++VAVK F +Q+ S + ++ FR EV +
Sbjct: 707 DVAEFEIQWEEITIGERIGLGSFGEVYRGEWHGTEVAVKKFLQQDISSDALEEFRTEVRI 766
Query: 428 MKKLRHPNILLFMGAVTSPQRLCIVTEFLP 457
+K+LRHPN++LFMGA+T L IVTEFLP
Sbjct: 767 IKRLRHPNVVLFMGAITRVPNLSIVTEFLP 796
>Os02g0527600 Similar to MAP kinase kinase kinase (Fragment)
Length = 753
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 67/93 (72%)
Query: 364 DHEADCLDYEILWEDLVIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEEVIQTFRQ 423
D D D I W +LV+ E+IG GS GTV+ A W GSDVAVK+ +Q++ E ++ F +
Sbjct: 451 DISLDIEDLIIPWSELVLKEKIGAGSFGTVHRADWNGSDVAVKILMEQDFHPERLKEFLR 510
Query: 424 EVSLMKKLRHPNILLFMGAVTSPQRLCIVTEFL 456
EV++MK LRHPNI+LFMGAVT P +L IVTE+L
Sbjct: 511 EVAIMKSLRHPNIVLFMGAVTQPPKLSIVTEYL 543
>Os06g0232100 Protein kinase-like domain containing protein
Length = 598
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 64/87 (73%)
Query: 371 DYEILWEDLVIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEEVIQTFRQEVSLMKK 430
++EI WE++ +GE++G GS G VY W+G++VAVK F +Q+ S + + FR E +MK+
Sbjct: 316 EFEIQWEEITLGERVGLGSFGEVYKGEWHGTEVAVKKFLQQDISSDALDEFRTEFQIMKR 375
Query: 431 LRHPNILLFMGAVTSPQRLCIVTEFLP 457
LRHPN++LFMGAVT L IVTEFLP
Sbjct: 376 LRHPNVVLFMGAVTRVPNLSIVTEFLP 402
>Os04g0610900 Similar to EDR1
Length = 778
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Query: 369 CLDY-EILWEDLVIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEEVIQTFRQEVSL 427
C D+ EI W+++ + E++G GS GTVY A W+GSDVAVKV + Q+ E ++ F +E+++
Sbjct: 502 CADWLEISWDEIELKERVGAGSFGTVYRADWHGSDVAVKVLTDQDVGEAQLKEFLREIAI 561
Query: 428 MKKLRHPNILLFMGAVTSPQRLCIVTEFLP 457
MK++RHPN++LFMGAVT L IVTE+LP
Sbjct: 562 MKRVRHPNVVLFMGAVTKCPHLSIVTEYLP 591
>Os02g0241600 Protein kinase-like domain containing protein
Length = 790
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 60/86 (69%)
Query: 371 DYEILWEDLVIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEEVIQTFRQEVSLMKK 430
++ I + ++ +G ++G G G V+ +W G+DVA+K+F +Q+ + E ++ F E+S++ +
Sbjct: 526 EWHIEFSEITVGTRVGIGFFGEVFRGIWNGTDVAIKLFLEQDLTTENMEDFCNEISILSR 585
Query: 431 LRHPNILLFMGAVTSPQRLCIVTEFL 456
LRHPN++LF+GA P L +VTE++
Sbjct: 586 LRHPNVILFLGACMKPPHLSLVTEYM 611
>Os01g0674100 Protein kinase-like domain containing protein
Length = 801
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 59/86 (68%)
Query: 371 DYEILWEDLVIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEEVIQTFRQEVSLMKK 430
++ I + +L IG ++G G G V+ +W G+DVA+KVF +Q+ + E ++ F E+ ++ +
Sbjct: 537 EWNIDFSELTIGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTTENMEDFCNEIYILSR 596
Query: 431 LRHPNILLFMGAVTSPQRLCIVTEFL 456
LRHPN++LF+GA P L +VTE++
Sbjct: 597 LRHPNVILFLGACMVPPHLSMVTEYM 622
>Os06g0724900 Amino acid-binding ACT domain containing protein
Length = 564
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%)
Query: 371 DYEILWEDLVIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEEVIQTFRQEVSLMKK 430
++EI ++ L I E++ G+ G +Y ++G DVA+KV +E + + F +EV +M+K
Sbjct: 277 EWEINFDVLDIQEKVASGTYGDLYRGTYFGEDVAIKVLKSDRLNENMQEEFNEEVFIMRK 336
Query: 431 LRHPNILLFMGAVTSPQRLCIVTEFL 456
+RH NI+ F+GA T LCIVTEF+
Sbjct: 337 IRHKNIVRFLGACTKSPTLCIVTEFM 362
>Os07g0475900 Amino acid-binding ACT domain containing protein
Length = 438
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 49/73 (67%)
Query: 384 QIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEEVIQTFRQEVSLMKKLRHPNILLFMGAV 443
++ GS G +YH + DVA+KV + S ++++ F QEV +MKK+RH N++ F+GA
Sbjct: 167 KLASGSFGDLYHGTYCSQDVAIKVLKPERVSVDMLREFAQEVYIMKKVRHKNVVQFIGAC 226
Query: 444 TSPQRLCIVTEFL 456
T P LCIVTEF+
Sbjct: 227 TRPPILCIVTEFM 239
>Os09g0544300 Amino acid-binding ACT domain containing protein
Length = 603
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%)
Query: 371 DYEILWEDLVIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEEVIQTFRQEVSLMKK 430
++EI + L G ++ GS G +Y + DVA+KV + + ++ + F QEV +M+K
Sbjct: 314 EWEIDVKLLKFGNKVASGSYGDLYRGTYCSQDVAIKVLKPERINADMQREFAQEVYIMRK 373
Query: 431 LRHPNILLFMGAVTSPQRLCIVTEFL 456
+RH N++ F+GA T P LCIVTE++
Sbjct: 374 VRHKNVVQFIGACTKPPNLCIVTEYM 399
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.313 0.131 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,335,868
Number of extensions: 639351
Number of successful extensions: 2652
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 2688
Number of HSP's successfully gapped: 12
Length of query: 457
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 353
Effective length of database: 11,605,545
Effective search space: 4096757385
Effective search space used: 4096757385
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 158 (65.5 bits)