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Os09g0544300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Amino acid-binding ACT domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0141) R2 : 0.445
β1 : -0.859 (0.0517) R2dD : 0.348 R2D : 0.192
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.376 (0.0301) R2dN8 : 0.254 R2N8 : 0.0968
σ : 0.265
deviance : 32.11
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.52 0.218 10.1 -0.533 0.272 0.231 0.563 -1.4 -0.254 12.2 24.8 644 -- --
23.32 0.225 10.1 -0.655 0.292 0.659 0.317 -- -0.317 12.2 16.71 7565 -- --
21.83 0.218 10.1 -0.545 0.322 0.178 -- -1.48 -0.281 12 24.39 254 -- --
23.59 0.226 10.1 -0.663 0.294 0.748 -- -- -0.315 11.7 16.05 6548 -- --
27.2 0.243 10.1 -0.522 -- 0.366 -- -1.17 -0.23 -- 25.36 651 -- --
26 0.239 10.1 -0.862 0.301 -- 0.325 -- -0.373 12 -- -- -- --
26.41 0.241 10.1 -0.85 0.301 -- -- -- -0.372 11.6 -- -- -- --
28.41 0.248 10.1 -0.726 -- 0.484 -- -- -0.298 -- 64.08 890 -- --
25.1 0.233 10.1 -- 0.296 0.914 -- -- -0.135 11.6 19.38 34849 -- --
32.11 0.265 10.1 -0.859 -- -- -- -- -0.376 -- -- -- -- --
45.46 0.315 10.1 -- 0.311 -- -- -- -0.278 11.8 -- -- -- --
30.4 0.257 10.1 -- -- 0.961 -- -- -0.136 -- 18.63 32497 -- --
51.55 0.335 10.1 -- -- -- -- -- -0.28 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 18.52 temperature 10.0 270 > th dose dependent rect. 3 17
24 19.30 temperature 20.0 270 > th dose independent rect. 3 16
54 19.82 wind 7.0 270 < th dose independent rect. 19 8
60 19.87 precipitation 0.1 270 < th dose independent rect. 15 16
62 19.87 precipitation 0.1 270 < th dose dependent rect. 15 16
78 20.03 wind 1.0 270 > th dose independent rect. 13 7
79 20.03 radiation 10.0 10 < th dose independent rect. 4 18
80 20.04 radiation 20.0 90 < th dose independent rect. 16 17
81 20.05 temperature 10.0 270 > th dose independent rect. 7 8
82 20.05 atmosphere 1015.0 270 < th dose independent rect. 7 8
83 20.05 temperature 10.0 270 > th dose independent rect. 15 16
84 20.06 radiation 40.0 270 < th dose independent rect. 15 16
96 20.13 atmosphere 995.0 270 > th dose independent rect. 7 8
97 20.13 atmosphere 995.0 270 > th dose independent rect. 15 16
100 20.15 precipitation 0.1 270 < th dose independent rect. 7 8
102 20.15 precipitation 0.1 270 < th dose dependent rect. 7 8
111 20.19 humidity 50.0 270 > th dose independent rect. 7 8
115 20.21 radiation 30.0 10 < th dose independent rect. 16 17
120 20.23 wind 9.0 270 < th dose independent rect. 7 8
121 20.23 temperature 15.0 270 > th dose independent rect. 13 8
124 20.26 precipitation 0.1 270 < th dose independent rect. 13 7
126 20.26 precipitation 0.1 270 < th dose dependent rect. 13 7
130 20.27 temperature 10.0 270 > th dose dependent rect. 1 8
133 20.28 radiation 1.0 270 < th dose dependent rect. 5 22
134 20.29 precipitation 0.1 270 < th dose independent rect. 3 16
135 20.29 atmosphere 1010.0 90 < th dose independent rect. 4 17
136 20.29 precipitation 0.1 270 < th dose dependent rect. 3 16
139 20.31 atmosphere 1010.0 270 < th dose independent rect. 13 7
140 20.32 temperature 15.0 1440 > th dose independent rect. 10 7
148 20.34 temperature 10.0 270 > th dose independent rect. 20 17
149 20.34 atmosphere 995.0 270 > th dose independent rect. 20 17
152 20.34 radiation 40.0 10 < th dose dependent rect. 16 17
164 20.38 wind 9.0 270 < th dose independent rect. 15 16
165 20.39 humidity 70.0 270 > th dose independent rect. 19 8
172 20.42 wind 9.0 270 < th dose independent rect. 20 17
175 20.42 radiation 40.0 90 < th dose dependent rect. 16 17
184 20.44 precipitation 0.1 270 < th dose independent rect. 2 18
185 20.44 precipitation 0.1 270 < th dose dependent rect. 2 18
186 20.45 atmosphere 995.0 270 > th dose independent rect. 13 7
189 20.45 humidity 50.0 270 > th dose independent rect. 20 17
211 20.50 temperature 10.0 270 > th dose independent rect. 19 8
212 20.50 temperature 30.0 270 < th dose independent rect. 19 8
213 20.50 humidity 50.0 270 > th dose independent rect. 19 8
215 20.50 atmosphere 995.0 270 > th dose independent rect. 19 8
217 20.50 radiation 1.0 270 < th dose independent rect. 19 8
224 20.50 radiation 1.0 270 < th dose dependent rect. 19 8
231 20.51 atmosphere 1015.0 270 < th dose independent rect. 20 17
235 20.52 wind 9.0 90 < th dose dependent rect. 21 6
238 20.54 wind 1.0 270 > th dose independent rect. 7 8
246 20.54 radiation 20.0 10 < th dose dependent rect. 4 18
248 20.55 wind 9.0 270 < th dose independent rect. 13 7
254 20.55 precipitation 0.1 270 < th dose independent rect. 20 17
259 20.55 precipitation 0.1 270 < th dose dependent rect. 20 17
263 20.56 radiation 40.0 10 < th dose dependent rect. 16 19
284 20.61 wind 7.0 270 < th dose independent rect. 9 16
301 20.63 atmosphere 995.0 270 > th dose independent rect. 3 16
308 20.64 temperature 15.0 10 > th dose independent rect. 16 17
316 20.65 radiation 40.0 10 < th dose dependent rect. 13 9
320 20.66 humidity 50.0 270 > th dose dependent rect. 19 7
328 20.67 wind 9.0 270 < th dose dependent rect. 19 7
339 20.69 precipitation 0.1 270 < th dose independent rect. 19 8
345 20.69 precipitation 0.1 270 < th dose dependent rect. 19 8
349 20.70 atmosphere 995.0 10 > th dose independent rect. 16 6
350 20.70 temperature 10.0 43200 > th dose independent rect. 10 7
354 20.70 humidity 50.0 90 > th dose dependent rect. 21 6
355 20.70 wind 1.0 270 > th dose dependent rect. 13 7
362 20.71 temperature 10.0 270 > th dose dependent rect. 15 16
364 20.72 radiation 40.0 270 < th dose independent rect. 14 6
366 20.72 temperature 15.0 1440 > th dose independent rect. 8 9
367 20.72 atmosphere 1015.0 10 < th dose independent rect. 22 18
368 20.73 temperature 10.0 10 > th dose independent rect. 16 6
370 20.73 temperature 10.0 270 > th dose independent rect. 20 6
371 20.73 temperature 30.0 270 < th dose independent rect. 20 6
372 20.73 humidity 50.0 270 > th dose independent rect. 20 6
375 20.73 atmosphere 995.0 270 > th dose independent rect. 20 6
376 20.73 atmosphere 1010.0 10 < th dose independent rect. 16 6
378 20.73 radiation 40.0 10 < th dose independent rect. 16 6
379 20.73 radiation 1.0 270 < th dose independent rect. 20 6
384 20.73 wind 9.0 270 < th dose independent rect. 3 16
386 20.73 temperature 10.0 10 > th dose independent rect. 22 18
388 20.73 radiation 1.0 270 < th dose dependent rect. 20 6
395 20.74 atmosphere 995.0 10 > th dose independent rect. 22 18
419 20.76 precipitation 0.1 10 < th dose independent rect. 16 6
420 20.76 wind 9.0 90 < th dose independent rect. 3 18
421 20.76 temperature 25.0 720 < th dose dependent sin 9 NA
422 20.76 precipitation 0.1 10 < th dose dependent rect. 16 6
430 20.77 atmosphere 995.0 270 > th dose independent rect. 2 18
431 20.77 temperature 25.0 720 < th dose dependent rect. 20 16
438 20.78 precipitation 0.1 270 < th dose independent rect. 20 6
443 20.78 precipitation 0.1 270 < th dose dependent rect. 20 6
447 20.79 precipitation 0.1 270 < th dose independent rect. 1 8
451 20.79 radiation 40.0 10 < th dose dependent rect. 16 6
453 20.79 precipitation 0.1 270 < th dose dependent rect. 1 8
459 20.80 wind 1.0 10 > th dose independent rect. 16 6
485 20.81 humidity 90.0 270 < th dose independent rect. 14 6
490 20.81 temperature 10.0 90 > th dose dependent rect. 21 6
503 20.83 humidity 50.0 10 > th dose independent rect. 16 6
510 20.84 wind 1.0 270 > th dose independent rect. 15 4
511 20.84 precipitation 0.1 270 < th dose independent rect. 15 4
518 20.84 humidity 50.0 30 > th dose independent rect. 16 17
520 20.84 precipitation 0.1 270 < th dose dependent rect. 15 4
546 20.85 atmosphere 995.0 10 > th dose independent rect. 16 17
588 20.87 wind 9.0 10 < th dose independent rect. 16 6
592 20.88 temperature 10.0 270 > th dose independent rect. 15 4
594 20.88 atmosphere 1010.0 270 < th dose independent rect. 15 4
600 20.88 atmosphere 1015.0 90 < th dose independent rect. 21 6
608 20.88 temperature 10.0 270 > th dose independent rect. 19 20
612 20.89 radiation 40.0 270 < th dose independent rect. 15 4
631 20.90 temperature 10.0 10 > th dose independent rect. 9 7
633 20.90 atmosphere 1015.0 10 < th dose independent rect. 9 7
634 20.90 precipitation 0.1 10 < th dose independent rect. 9 7
636 20.90 radiation 1.0 270 < th dose dependent sin 13 NA
637 20.90 precipitation 0.1 10 < th dose dependent rect. 9 7
655 20.91 temperature 10.0 270 > th dose dependent rect. 14 6
683 20.92 temperature 25.0 720 < th dose dependent rect. 21 11
690 20.93 wind 9.0 270 < th dose independent rect. 1 8
691 20.93 temperature 10.0 270 > th dose independent rect. 1 8
693 20.93 humidity 50.0 270 > th dose independent rect. 1 8
694 20.93 atmosphere 995.0 270 > th dose independent rect. 1 8
695 20.93 atmosphere 1015.0 270 < th dose independent rect. 1 8
697 20.93 temperature 10.0 270 > th dose independent rect. 9 16
710 20.94 temperature 30.0 270 < th dose independent rect. 1 8
712 20.94 temperature 10.0 1440 > th dose independent rect. 17 17
725 20.95 atmosphere 995.0 270 > th dose independent rect. 15 4
732 20.95 wind 9.0 270 < th dose independent rect. 19 20
745 20.96 humidity 50.0 43200 > th dose independent rect. 23 5
746 20.96 atmosphere 995.0 10 > th dose independent rect. 9 7
755 20.96 radiation 10.0 90 < th dose independent rect. 4 17
783 20.98 radiation 10.0 10 < th dose independent rect. 10 12
784 20.98 radiation 1.0 270 > th dose independent rect. 15 15
788 20.98 wind 9.0 10 < th dose independent rect. 22 18
803 20.98 temperature 10.0 10 > th dose dependent rect. 23 23
856 21.00 temperature 10.0 270 > th dose dependent rect. 13 20
858 21.01 humidity 90.0 10 < th dose independent rect. 16 6
861 21.01 radiation 40.0 270 < th dose independent rect. 1 8
868 21.01 humidity 50.0 270 > th dose independent rect. 19 20
888 21.02 precipitation 0.1 10 < th dose independent rect. 22 18
895 21.02 precipitation 0.1 10 < th dose dependent rect. 22 18
897 21.03 temperature 10.0 1440 > th dose independent rect. 17 6
900 21.03 radiation 30.0 1440 < th dose independent rect. 17 6
909 21.03 wind 9.0 10 < th dose independent rect. 16 17
912 21.03 temperature 10.0 1440 > th dose independent rect. 23 18
930 21.04 wind 1.0 270 > th dose independent rect. 19 8
938 21.05 radiation 1.0 90 > th dose independent rect. 9 7
947 21.05 temperature 10.0 10 > th dose dependent rect. 16 6
957 21.06 radiation 1.0 4320 < th dose independent rect. 22 7
978 21.07 radiation 30.0 10 < th dose independent rect. 13 9
989 21.07 temperature 10.0 90 > th dose dependent rect. 3 23
990 21.08 wind 9.0 270 < th dose independent rect. 15 4