BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0263100 Os12g0263100|AK102127
(527 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0263100 Similar to Zinc finger, DHHC domain containing 4 724 0.0
Os04g0585100 Zinc finger, DHHC-type domain containing protein 157 2e-38
Os08g0556400 Zinc finger, DHHC-type domain containing protein 150 3e-36
Os03g0209500 Zinc finger, DHHC-type domain containing protein 129 8e-30
Os10g0337500 Zinc finger, DHHC-type domain containing protein 127 3e-29
Os07g0596000 Zinc finger, DHHC-type domain containing protein 82 9e-16
Os09g0563250 Conserved hypothetical protein 74 2e-13
Os02g0184000 Zinc finger, DHHC-type domain containing protein 67 2e-11
Os11g0549700 Zinc finger, DHHC-type domain containing protein 67 3e-11
Os06g0644500 Zinc finger, DHHC-type domain containing protein 65 8e-11
>Os12g0263100 Similar to Zinc finger, DHHC domain containing 4
Length = 527
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/527 (71%), Positives = 375/527 (71%)
Query: 1 MGSGESXXXXXXXXXXXXXXXXHGWQLPLHPLQLVGMXXXXXXXXXXXXXXGPYLGSTVA 60
MGSGES HGWQLPLHPLQLVGM GPYLGSTVA
Sbjct: 1 MGSGESTAAAAATMAWPRWRRRHGWQLPLHPLQLVGMAVFAVLVAAFYVVLGPYLGSTVA 60
Query: 61 GNTXXXXXXXXXXXXXXXYVRCTAVDPSDRTHAKKMKXXXXXXXXXXXXXXXXXXXXXXX 120
GNT YVRCTAVDPSDRTHAKKMK
Sbjct: 61 GNTLLALFSSSAAGAAALYVRCTAVDPSDRTHAKKMKRRRQLARARAGRRGGGGGGRLPR 120
Query: 121 XXYGYILWXXXXXXXXXXXXXXMNRWVRRSYLEQWNSSVQLDPMLPFAFTSLDDIVSPHA 180
YGYILW MNRWVRRSYLEQWNSSVQLDPMLPFAFTSLDDIVSPHA
Sbjct: 121 LRYGYILWRYVVRLLRRVEVRVMNRWVRRSYLEQWNSSVQLDPMLPFAFTSLDDIVSPHA 180
Query: 181 AAGHDISYCPVCDCEVKLRSKHCKTCDRCVDGFDHHCRWLNNCIGRRNYASXXXXXXXXX 240
AAGHDISYCPVCDCEVKLRSKHCKTCDRCVDGFDHHCRWLNNCIGRRNYAS
Sbjct: 181 AAGHDISYCPVCDCEVKLRSKHCKTCDRCVDGFDHHCRWLNNCIGRRNYASFILLMFFVL 240
Query: 241 XXXXXEGGTAIAIFVRCFTDSKGLKMEMEHRLHIRLPKGAHAALSMVFVIFTLYSTVALG 300
EGGTAIAIFVRCFTDSKGLKMEMEHRLHIRLPKGAHAALSMVFVIFTLYSTVALG
Sbjct: 241 LMLVIEGGTAIAIFVRCFTDSKGLKMEMEHRLHIRLPKGAHAALSMVFVIFTLYSTVALG 300
Query: 301 QLFFFHVVLIRKGMRTYDYILAMREAAQAFXXXXXXXXXXXXXXXXXXXXRPSFLSRIFC 360
QLFFFHVVLIRKGMRTYDYILAMREAAQAF RPSFLSRIFC
Sbjct: 301 QLFFFHVVLIRKGMRTYDYILAMREAAQAFDPFDDSDSSSDESIDFDSPERPSFLSRIFC 360
Query: 361 RKDELSESTRKLSIRIENEPSDGTRRKDDIQINPWTLIXXXXXXXXXXXXXXXXXIRNKL 420
RKDELSESTRKLSIRIENEPSDGTRRKDDIQINPWTLI IRNKL
Sbjct: 361 RKDELSESTRKLSIRIENEPSDGTRRKDDIQINPWTLIKMSKEKAMAAAERARERIRNKL 420
Query: 421 PSTTTSPMKPLPVETKRGPLNQERKHIMTGKEIVPVFTKSWLSGSPTAXXXXXXXXXXXX 480
PSTTTSPMKPLPVETKRGPLNQERKHIMTGKEIVPVFTKSWLSGSPTA
Sbjct: 421 PSTTTSPMKPLPVETKRGPLNQERKHIMTGKEIVPVFTKSWLSGSPTARLSSPRRRFSGS 480
Query: 481 XXXXXQRHRSNFDLRLAEVSRELESHISKQVLCSVVMKGVEDEDSPS 527
QRHRSNFDLRLAEVSRELESHISKQVLCSVVMKGVEDEDSPS
Sbjct: 481 PSPKPQRHRSNFDLRLAEVSRELESHISKQVLCSVVMKGVEDEDSPS 527
>Os04g0585100 Zinc finger, DHHC-type domain containing protein
Length = 616
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 95/141 (67%)
Query: 188 YCPVCDCEVKLRSKHCKTCDRCVDGFDHHCRWLNNCIGRRNYASXXXXXXXXXXXXXXEG 247
+C +C+ EV+ SKHC++CD+CVDGFDHHCRWLNNC+GR+NY + E
Sbjct: 147 FCTLCNAEVRKNSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYVTFLCLMAVSLAWLAVES 206
Query: 248 GTAIAIFVRCFTDSKGLKMEMEHRLHIRLPKGAHAALSMVFVIFTLYSTVALGQLFFFHV 307
G IA+FVRCFTD ++ ++ +L L + AA+ + ++ ++V LG+LFFFH+
Sbjct: 207 GVGIAVFVRCFTDKAAIEDQIGEKLGYGLSRALFAAIGALGTALSMLASVPLGELFFFHM 266
Query: 308 VLIRKGMRTYDYILAMREAAQ 328
+LIRKG+ TY+Y++AMR ++
Sbjct: 267 ILIRKGITTYEYVVAMRAQSE 287
>Os08g0556400 Zinc finger, DHHC-type domain containing protein
Length = 697
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 98/153 (64%), Gaps = 1/153 (0%)
Query: 177 SPHAAAGHDISYCPVCDCEVKLRSKHCKTCDRCVDGFDHHCRWLNNCIGRRNYASXXXXX 236
S H A G D +C +C+ EV+ SKHC++CD+CVDGFDHHCRWLNNC+GR+NY +
Sbjct: 167 SEHQADGEDALFCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYFTFLALM 226
Query: 237 XXXXXXXXXEGGTAIAIFVRCFTDSKGLKMEMEHRLHIRLPKGAHAALSMVFVIFTLYST 296
E G IA+ V CF + K + ++ +L L + A + +F + ++ +
Sbjct: 227 ITSLLWLAIEIGVGIAVLVVCFVN-KNSESIIQDKLANGLTRPPFATIVAIFTLLSIIAC 285
Query: 297 VALGQLFFFHVVLIRKGMRTYDYILAMREAAQA 329
+ LG+LFFFH++LIRKG+ TY+Y++AMR ++A
Sbjct: 286 IPLGELFFFHMILIRKGITTYEYVVAMRAMSEA 318
>Os03g0209500 Zinc finger, DHHC-type domain containing protein
Length = 598
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 121/314 (38%), Gaps = 28/314 (8%)
Query: 23 HGWQLPLHPLQLVGMXXXXXXXXXXXXXXGPYLGSTVAGNTXXXXXXXXXXXXXXXYVRC 82
HGWQLP HPLQ+V + P++G Y+ C
Sbjct: 4 HGWQLPYHPLQVVAIAVFLALGFAFYVFFVPFVGRKAFQYVAMVLYTPLITSVVVLYIWC 63
Query: 83 TAVDPSDR---THAKKMKXXXXXXXXXXXXXXXXXXXXXXXXXYGYILWXXXXXXXXXXX 139
A +P D A+ K + +
Sbjct: 64 AATNPGDPGIFKSAEHPKLKDGRRSQKNSDHGLSQGGKMSSDGFNAV------------- 110
Query: 140 XXXMNRWVRRSYLEQWNSSV--QLDPMLPFAFTSL-------DDIVSPHAAAGHDISYCP 190
N S LEQ +S +L F F+ L D+ S + + +C
Sbjct: 111 ---DNSEKLSSMLEQNDSHSWPTFSEILCFPFSCLCKRCFHADNQSSEQHMSEEGMFFCS 167
Query: 191 VCDCEVKLRSKHCKTCDRCVDGFDHHCRWLNNCIGRRNYASXXXXXXXXXXXXXXEGGTA 250
+C+ EV SKHC+ CD+CVDGFDHHCRWLNNCIG+RNY + +
Sbjct: 168 LCEAEVLKNSKHCRVCDKCVDGFDHHCRWLNNCIGKRNYKGFFLLMTSAVLLLVMQWLSG 227
Query: 251 IAIFVRCFTDSKGLKMEMEHRLHIRLPKGAHAALSMVFVIFTLYSTVALGQLFFFHVVLI 310
+ + C D ++ +L + + + +T+ L QL FH++LI
Sbjct: 228 ALVLILCIVDRGEFSRQIVSKLGSSFSTVVFIIVVATCTVLAMIATIPLAQLLCFHILLI 287
Query: 311 RKGMRTYDYILAMR 324
+KG+ TYDYI+A+R
Sbjct: 288 KKGISTYDYIIALR 301
>Os10g0337500 Zinc finger, DHHC-type domain containing protein
Length = 596
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 82/156 (52%)
Query: 169 FTSLDDIVSPHAAAGHDISYCPVCDCEVKLRSKHCKTCDRCVDGFDHHCRWLNNCIGRRN 228
F DD S + + +C +C+ EV SKHC+ CD+CVDGFDHHCRWLNNCIG+RN
Sbjct: 150 FFHSDDQSSEQHMSEEGMFFCSLCEVEVLQHSKHCRVCDKCVDGFDHHCRWLNNCIGKRN 209
Query: 229 YASXXXXXXXXXXXXXXEGGTAIAIFVRCFTDSKGLKMEMEHRLHIRLPKGAHAALSMVF 288
Y + I + + C ++ +L A + M
Sbjct: 210 YKRFFILMASAVLLLIMQWLVGILVLILCLLKRGEFSGQIISKLGSSFSTAAFVIVVMTC 269
Query: 289 VIFTLYSTVALGQLFFFHVVLIRKGMRTYDYILAMR 324
+ + +T+ L QLF FHV+LI+KG+ TYDYI+A+R
Sbjct: 270 TLLAMLATIPLAQLFCFHVLLIKKGISTYDYIVALR 305
>Os07g0596000 Zinc finger, DHHC-type domain containing protein
Length = 248
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 40/53 (75%)
Query: 177 SPHAAAGHDISYCPVCDCEVKLRSKHCKTCDRCVDGFDHHCRWLNNCIGRRNY 229
S A+ + +C +C+ EV SKHC+ CD+CVDGFDHHCRWLNNCIG+RNY
Sbjct: 162 SEQQASEEGMFFCSLCEVEVLKYSKHCRVCDKCVDGFDHHCRWLNNCIGKRNY 214
>Os09g0563250 Conserved hypothetical protein
Length = 473
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 246 EGGTAIAIFVRCFTDSKGLKMEMEHRLHIRLPKGAHAALSMVFVIFTLYSTVALGQLFFF 305
E G IA+ V CF D L ++ +L + + A + +F + +L + + LG+LFFF
Sbjct: 11 EFGVGIAVIVLCFVDKNALS-NIQDKLGNGMTRAPFAVIVGLFTLLSLVACIPLGELFFF 69
Query: 306 HVVLIRKGMRTYDYILAMREAAQA 329
H++LIRKG+ TYDY++AMR ++A
Sbjct: 70 HMILIRKGITTYDYVVAMRAMSEA 93
>Os02g0184000 Zinc finger, DHHC-type domain containing protein
Length = 654
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%)
Query: 177 SPHAAAGHDISYCPVCDCEVKLRSKHCKTCDRCVDGFDHHCRWLNNCIGRRN 228
+P AG+ C C +RSKHC TCDRCV+ FDHHC W++NCIG++N
Sbjct: 375 NPELLAGNWSQLCITCKIVRPVRSKHCSTCDRCVEQFDHHCPWVSNCIGKKN 426
>Os11g0549700 Zinc finger, DHHC-type domain containing protein
Length = 479
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 160 QLDPMLPFAFTSLDDIVSPHAAAGHDISYCPVCDCEVKLRSKHCKTCDRCVDGFDHHCRW 219
+LDP P L+ A G+ CP C +RSKHC TC CV+ FDHHC W
Sbjct: 277 RLDPKEPLMEIDLNS----SAWTGNWSQLCPTCKIIRPMRSKHCPTCKHCVEQFDHHCPW 332
Query: 220 LNNCIGRRN 228
++NC+GRRN
Sbjct: 333 ISNCVGRRN 341
>Os06g0644500 Zinc finger, DHHC-type domain containing protein
Length = 649
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 174 DIVSPHAAAGHDISYCPVCDCEVKLRSKHCKTCDRCVDGFDHHCRWLNNCIGRRN 228
++ +P +G+ C C +RSKHC TCDRCV+ FDHHC W++NCIG++N
Sbjct: 379 ELDNPALLSGNWSQLCITCKIVRPVRSKHCSTCDRCVEQFDHHCPWVSNCIGKKN 433
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.136 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,150,298
Number of extensions: 416518
Number of successful extensions: 972
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 950
Number of HSP's successfully gapped: 13
Length of query: 527
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 422
Effective length of database: 11,553,331
Effective search space: 4875505682
Effective search space used: 4875505682
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 158 (65.5 bits)