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Os03g0209500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Zinc finger, DHHC-type domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.97 (0.0315) R2 : 0.767
β1 : -3.78 (0.131) R2dD : 0.596 R2D : 0.0493
β2 : 1.72 (0.0736) R2dC : 0.283 R2C : 0.278
β3 : 2.93 (0.142) R2dE : 0.323 R2E : -0.16
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.04 (0.0721) R2dN8 : 0.17 R2N8 : -0.0979
σ : 0.576
deviance : 153.01
__
_____
C
peak time of C : 0.764
E
wheather : temperature
threshold : 4.788
memory length : 5520
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
150.32 0.576 9.94 -3.59 1.72 2.97 0.707 0.749 -0.984 0.809 7.784 5513 -- --
150.79 0.572 9.97 -3.75 1.72 2.92 0.727 -- -1.03 0.813 4.43 5514 -- --
152.4 0.575 9.94 -3.59 1.72 2.98 -- 0.85 -0.983 0.754 8.164 5519 -- --
153.01 0.576 9.97 -3.78 1.72 2.93 -- -- -1.04 0.764 4.788 5520 -- --
306.54 0.815 9.92 -3.31 -- 3.22 -- 0.959 -0.979 -- 14.2 2462 -- --
292.26 0.801 9.83 -2.36 1.87 -- 0.875 -- -0.422 0.894 -- -- -- --
295.46 0.805 9.84 -2.39 1.87 -- -- -- -0.426 0.846 -- -- -- --
306.07 0.815 9.95 -3.55 -- 3.18 -- -- -1.05 -- 13.69 2454 -- --
388.77 0.918 9.77 -- 1.65 1.23 -- -- -0.164 0.341 26.1 2654 -- --
512.93 1.06 9.81 -2.32 -- -- -- -- -0.392 -- -- -- -- --
445.96 0.988 9.78 -- 1.83 -- -- -- -0.16 0.788 -- -- -- --
512.16 1.05 9.79 -- -- 2.06 -- -- -0.339 -- 24.21 1049 -- --
655.04 1.19 9.75 -- -- -- -- -- -0.134 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 139.02 radiation 10 14400 < th dose independent rect. 16 14
2 141.06 humidity 70 14400 < th dose independent rect. 19 2
13 141.39 radiation 10 14400 < th dose independent rect. 16 9
17 141.43 radiation 10 14400 < th dose independent rect. 16 7
19 141.44 radiation 10 14400 < th dose independent rect. 16 5
21 141.46 radiation 10 14400 < th dose independent rect. 16 3
24 141.76 radiation 1 14400 > th dose dependent rect. 17 13
27 142.37 radiation 30 14400 < th dose independent rect. 15 17
30 143.55 radiation 40 14400 < th dose dependent rect. 18 9
32 143.94 radiation 40 14400 < th dose dependent rect. 18 7
36 144.42 radiation 1 14400 > th dose dependent rect. 17 2
57 145.52 humidity 70 14400 > th dose independent rect. 19 2
58 145.54 radiation 1 14400 < th dose independent rect. 17 18
60 145.73 radiation 40 14400 < th dose dependent rect. 17 13
61 145.74 radiation 20 14400 < th dose dependent rect. 17 13
65 145.84 humidity 60 43200 > th dose independent rect. 15 1
66 145.84 radiation 1 14400 > th dose independent rect. 17 18
70 146.15 radiation 30 14400 < th dose dependent rect. 18 5
79 146.23 radiation 1 14400 > th dose independent rect. 17 2
101 146.34 radiation 10 14400 > th dose dependent rect. 16 15
103 146.39 humidity 70 14400 > th dose independent rect. 19 8
106 146.40 humidity 70 14400 > th dose independent rect. 19 6
112 146.46 radiation 30 14400 < th dose dependent rect. 18 3
133 146.72 radiation 20 14400 < th dose dependent rect. 18 1
211 148.09 humidity 60 43200 < th dose independent rect. 15 1
216 148.14 temperature 10 1440 > th dose dependent rect. 9 8
217 148.15 radiation 1 14400 < th dose independent sin 11 NA
219 148.17 radiation 1 14400 > th dose dependent rect. 4 2
267 148.55 radiation 1 14400 > th dose independent sin 11 NA
342 149.16 radiation 1 14400 > th dose independent rect. 5 6
344 149.16 temperature 10 1440 > th dose dependent rect. 10 5
349 149.21 radiation 1 14400 < th dose independent rect. 5 6
395 149.68 temperature 15 1440 > th dose dependent rect. 11 3
396 149.68 radiation 1 14400 < th dose dependent rect. 17 18
401 149.73 radiation 1 14400 < th dose independent rect. 20 15
403 149.74 radiation 1 14400 < th dose independent rect. 22 13
410 149.75 radiation 1 14400 < th dose independent rect. 24 11
430 149.80 radiation 1 14400 < th dose independent rect. 2 9
438 149.84 radiation 30 14400 < th dose independent rect. 15 12
439 149.85 radiation 30 14400 < th dose independent rect. 15 10
442 149.89 radiation 30 14400 < th dose independent rect. 15 8
446 149.91 radiation 30 14400 < th dose independent rect. 15 6
454 149.94 radiation 30 14400 < th dose independent rect. 15 2
464 149.97 wind 5 43200 < th dose independent rect. 5 1
476 150.07 humidity 90 43200 < th dose independent rect. 20 1
524 150.21 temperature 10 1440 > th dose dependent sin 23 NA
535 150.29 radiation 20 4320 < th dose dependent rect. 20 10
564 150.50 radiation 1 14400 < th dose independent rect. 8 22
570 150.52 wind 5 43200 > th dose independent rect. 10 2
585 150.67 radiation 1 14400 > th dose independent rect. 8 22
598 150.74 humidity 90 43200 > th dose dependent rect. 21 1
607 150.83 radiation 1 14400 < th dose independent rect. 5 1
639 150.91 radiation 20 4320 < th dose dependent rect. 22 8
646 150.93 radiation 1 14400 > th dose independent rect. 5 1
701 151.09 wind 5 43200 < th dose independent rect. 10 2
702 151.09 radiation 1 14400 < th dose independent rect. 5 22
705 151.10 radiation 1 14400 < th dose independent rect. 5 20
721 151.12 radiation 1 14400 < th dose independent rect. 5 14
723 151.12 radiation 1 14400 < th dose independent rect. 5 18
739 151.17 radiation 1 14400 < th dose dependent sin 12 NA
748 151.19 radiation 1 14400 < th dose independent rect. 22 21
749 151.19 radiation 1 14400 < th dose independent rect. 2 23
751 151.19 radiation 1 14400 < th dose independent rect. 20 23
752 151.19 radiation 1 14400 < th dose independent rect. 22 23
753 151.19 radiation 1 14400 < th dose independent rect. 24 23
754 151.20 radiation 1 14400 < th dose independent no NA NA
755 151.20 radiation 1 14400 < th dose independent rect. 24 19
771 151.22 radiation 1 14400 < th dose independent rect. 2 17
832 151.31 radiation 30 14400 > th dose dependent rect. 15 17
850 151.42 radiation 1 14400 > th dose independent rect. 5 14
876 151.48 temperature 10 1440 > th dose dependent rect. 16 1
885 151.54 radiation 1 14400 > th dose independent no NA NA
937 151.55 radiation 20 14400 < th dose dependent rect. 24 6
944 151.58 humidity 90 43200 < th dose independent rect. 20 3
945 151.58 radiation 20 14400 < th dose dependent rect. 2 4
949 151.59 radiation 20 14400 < th dose dependent rect. 4 2
958 151.64 humidity 70 14400 < th dose dependent rect. 18 2
986 151.73 humidity 70 14400 < th dose dependent rect. 18 13