Os07g0596000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, DHHC-type domain containing protein.
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Os07g0596000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, DHHC-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.2 | 0.382 | 7.7 | -0.881 | 0.307 | 1.52 | -0.628 | 0.221 | -0.0673 | 14.9 | 20.73 | 706 | -- | -- |
| 66.13 | 0.379 | 7.7 | -0.923 | 0.297 | 1.52 | -0.614 | -- | -0.0766 | 14.8 | 21.23 | 703 | -- | -- |
| 67.37 | 0.382 | 7.7 | -0.893 | 0.319 | 1.49 | -- | 0.185 | -0.065 | 14.9 | 21.33 | 725 | -- | -- |
| 67.38 | 0.382 | 7.7 | -0.932 | 0.309 | 1.52 | -- | -- | -0.0752 | 14.7 | 21.43 | 716 | -- | -- |
| 69.17 | 0.387 | 7.71 | -1.01 | -- | 1.6 | -- | -0.455 | -0.105 | -- | 21.46 | 533 | -- | -- |
| 115.61 | 0.504 | 7.66 | -0.541 | 0.626 | -- | -0.033 | -- | 0.192 | 18.2 | -- | -- | -- | -- |
| 115.62 | 0.504 | 7.66 | -0.541 | 0.626 | -- | -- | -- | 0.192 | 18.2 | -- | -- | -- | -- |
| 69.3 | 0.388 | 7.7 | -0.918 | -- | 1.58 | -- | -- | -0.0821 | -- | 21.4 | 541 | -- | -- |
| 88.21 | 0.437 | 7.67 | -- | 0.331 | 1.24 | -- | -- | 0.0786 | 15.6 | 22.16 | 706 | -- | -- |
| 135.93 | 0.545 | 7.64 | -0.558 | -- | -- | -- | -- | 0.178 | -- | -- | -- | -- | -- |
| 123.32 | 0.519 | 7.64 | -- | 0.633 | -- | -- | -- | 0.252 | 18.2 | -- | -- | -- | -- |
| 89.97 | 0.442 | 7.67 | -- | -- | 1.37 | -- | -- | 0.062 | -- | 22.23 | 516 | -- | -- |
| 144.13 | 0.56 | 7.63 | -- | -- | -- | -- | -- | 0.24 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.52 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 21 |
| 2 | 65.58 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 26 | 66.15 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 33 | 66.23 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 48 | 66.40 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 16 |
| 56 | 66.48 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 79 | 66.69 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 134 | 67.25 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 156 | 67.40 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 7 |
| 165 | 67.44 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 189 | 67.54 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 368 | 68.09 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 424 | 68.24 | temperature | 10 | 720 | > th | dose dependent | sin | 1 | NA |
| 437 | 68.26 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 10 |
| 441 | 68.26 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 15 |
| 447 | 68.27 | temperature | 30 | 4320 | < th | dose dependent | rect. | 2 | 7 |
| 467 | 68.30 | temperature | 10 | 4320 | > th | dose dependent | rect. | 2 | 7 |
| 481 | 68.32 | temperature | 20 | 4320 | > th | dose dependent | sin | 10 | NA |
| 529 | 68.39 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 16 |
| 577 | 68.46 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 595 | 68.47 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 16 |
| 638 | 68.53 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 13 |
| 663 | 68.56 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 13 |
| 695 | 68.60 | temperature | 10 | 4320 | > th | dose dependent | sin | 10 | NA |
| 803 | 68.71 | temperature | 30 | 4320 | < th | dose dependent | sin | 10 | NA |
| 833 | 68.74 | temperature | 10 | 1440 | > th | dose dependent | sin | 19 | NA |
| 855 | 68.76 | temperature | 20 | 1440 | > th | dose dependent | sin | 3 | NA |