Os11g0549700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, DHHC-type domain containing protein.
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Os11g0549700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, DHHC-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.03 | 0.194 | 10.6 | -0.834 | 1.02 | -0.468 | 0.357 | -0.523 | 0.128 | 3.84 | 23.31 | 38 | -- | -- |
| 17.34 | 0.195 | 10.7 | -0.893 | 1.01 | -0.383 | 0.212 | -- | 0.113 | 3.86 | 23.79 | 40 | -- | -- |
| 17.33 | 0.195 | 10.7 | -0.862 | 1.01 | -0.432 | -- | -0.293 | 0.122 | 3.86 | 23.3 | 38 | -- | -- |
| 17.47 | 0.196 | 10.7 | -0.895 | 1.01 | -0.382 | -- | -- | 0.112 | 3.87 | 23.79 | 40 | -- | -- |
| 65.87 | 0.378 | 10.7 | -0.656 | -- | -0.626 | -- | -0.859 | 0.0368 | -- | 25.93 | 1160 | -- | -- |
| 19.36 | 0.206 | 10.6 | -0.809 | 0.968 | -- | 0.202 | -- | 0.172 | 4.03 | -- | -- | -- | -- |
| 19.48 | 0.207 | 10.6 | -0.811 | 0.969 | -- | -- | -- | 0.171 | 4.05 | -- | -- | -- | -- |
| 62.64 | 0.37 | 10.6 | -0.636 | -- | 0.689 | -- | -- | 0.298 | -- | 32.9 | 109 | -- | -- |
| 36.72 | 0.282 | 10.6 | -- | 0.929 | 0.0856 | -- | -- | 0.274 | 4.11 | 33.1 | 34 | -- | -- |
| 70.65 | 0.393 | 10.6 | -0.772 | -- | -- | -- | -- | 0.197 | -- | -- | -- | -- | -- |
| 36.81 | 0.284 | 10.6 | -- | 0.954 | -- | -- | -- | 0.261 | 4.06 | -- | -- | -- | -- |
| 70.48 | 0.391 | 10.6 | -- | -- | 1.01 | -- | -- | 0.393 | -- | 35.68 | 148 | -- | -- |
| 86.35 | 0.434 | 10.6 | -- | -- | -- | -- | -- | 0.282 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.32 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 20 | 10 |
| 3 | 15.37 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 10 |
| 7 | 15.50 | temperature | 20.0 | 10 | > th | dose independent | rect. | 10 | 20 |
| 14 | 15.63 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 10 |
| 72 | 16.22 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 10 | 20 |
| 73 | 16.26 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 77 | 16.28 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 21 |
| 95 | 16.40 | wind | 3.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 103 | 16.42 | wind | 3.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 116 | 16.49 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 16 | 16 |
| 139 | 16.61 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 149 | 16.64 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 150 | 16.64 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 171 | 16.68 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 174 | 16.69 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 177 | 16.69 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 179 | 16.70 | temperature | 25.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 185 | 16.70 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 204 | 16.72 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 211 | 16.73 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 247 | 16.77 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 252 | 16.77 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 271 | 16.78 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 21 | 4 |
| 295 | 16.80 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 300 | 16.80 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 309 | 16.80 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 329 | 16.82 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 334 | 16.82 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 357 | 16.84 | wind | 1.0 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 361 | 16.84 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 374 | 16.85 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 376 | 16.85 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 413 | 16.87 | temperature | 25.0 | 270 | < th | dose dependent | sin | 14 | NA |
| 427 | 16.87 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 17 | 9 |
| 439 | 16.88 | temperature | 25.0 | 30 | < th | dose dependent | sin | 15 | NA |
| 478 | 16.89 | temperature | 10.0 | 270 | > th | dose dependent | sin | 11 | NA |
| 501 | 16.90 | temperature | 20.0 | 720 | > th | dose independent | rect. | 17 | 4 |
| 612 | 16.94 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 624 | 16.94 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 7 |
| 632 | 16.94 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 13 | 14 |
| 644 | 16.95 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 721 | 16.96 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 897 | 17.01 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 932 | 17.02 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 5 | 12 |
| 970 | 17.03 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 10 | NA |