BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0516000 Os11g0516000|AK069007
(488 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0516000 Similar to Serine palmitoyltransferase (Fragment) 981 0.0
Os01g0928800 Similar to Serine palmitoyltransferase 892 0.0
Os01g0928700 Similar to Serine palmitoyltransferase 837 0.0
Os02g0806900 Aminotransferase, class I and II domain contai... 154 2e-37
Os03g0252800 Aminotransferase, class I and II domain contai... 153 2e-37
Os10g0189600 Aminotransferase, class I and II domain contai... 150 1e-36
Os01g0928600 Similar to Serine palmitoyltransferase (Fragment) 109 4e-24
Os01g0736400 Aminotransferase, class I and II domain contai... 101 1e-21
Os10g0560900 Aminotransferase, class I and II domain contai... 99 5e-21
AK107303 95 1e-19
>Os11g0516000 Similar to Serine palmitoyltransferase (Fragment)
Length = 488
Score = 981 bits (2537), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/488 (97%), Positives = 476/488 (97%)
Query: 1 MVRLPYTTALTTLFSYGLLFAFGQLRDFFRKLIDWFKAKNVKGYAPICLGLEDFYVRRLY 60
MVRLPYTTALTTLFSYGLLFAFGQLRDFFRKLIDWFKAKNVKGYAPICLGLEDFYVRRLY
Sbjct: 1 MVRLPYTTALTTLFSYGLLFAFGQLRDFFRKLIDWFKAKNVKGYAPICLGLEDFYVRRLY 60
Query: 61 LRIQDCFGRPIASAPDAWFDVVERYSNDSNKTLKRTSNTTRCLNLGSYNYLGFAAADEYC 120
LRIQDCFGRPIASAPDAWFDVVERYSNDSNKTLKRTSNTTRCLNLGSYNYLGFAAADEYC
Sbjct: 61 LRIQDCFGRPIASAPDAWFDVVERYSNDSNKTLKRTSNTTRCLNLGSYNYLGFAAADEYC 120
Query: 121 TPLVIESLKKYSPSTCSVRVDGGTTKLHTELEELVARFVGKPAAILFGMGYVTNSAIIPC 180
TPLVIESLKKYSPSTCSVRVDGGTTKLHTELEELVARFVGKPAAILFGMGYVTNSAIIPC
Sbjct: 121 TPLVIESLKKYSPSTCSVRVDGGTTKLHTELEELVARFVGKPAAILFGMGYVTNSAIIPC 180
Query: 181 LVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNSPAHLEEVLREQIAGGQPRTHRPWK 240
LVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNSPAHLEEVLREQIAGGQPRTHRPWK
Sbjct: 181 LVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNSPAHLEEVLREQIAGGQPRTHRPWK 240
Query: 241 KIIVIVEGIYSMEGELCKLPEIIAVCKKYKAYTYLDEAHSIGAVGQSGRGVCELLGVDPA 300
KIIVIVEGIYSMEGELCKLPEIIAVCKKYKAYTYLDEAHSIGAVGQSGRGVCELLGVDPA
Sbjct: 241 KIIVIVEGIYSMEGELCKLPEIIAVCKKYKAYTYLDEAHSIGAVGQSGRGVCELLGVDPA 300
Query: 301 DVDIMMGTFTKSFGSCGGYIAASKEIIQHLKLSCPAHIYATSMSPPAVQQVISAIKVILG 360
DVDIMMGTFTKSFGSCGGYIAASKEIIQHLKLSCPAHIYATSMSPPAVQQVISAIKVILG
Sbjct: 301 DVDIMMGTFTKSFGSCGGYIAASKEIIQHLKLSCPAHIYATSMSPPAVQQVISAIKVILG 360
Query: 361 EDGSNRGAQKLARIRENSNFFRSELKKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR 420
EDGSNRGAQKLARIRENSNFFRSELKKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR
Sbjct: 361 EDGSNRGAQKLARIRENSNFFRSELKKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR 420
Query: 421 QKXXXXXXXXXXXXLLLARARICISASHTREDLIKALDVISRVGDLVGIKYFPAEPPKIA 480
QK LLLARARICISASHTREDLIKALDVISRVGDLVGIKYFPAEPPKIA
Sbjct: 421 QKVAVVTVAFPATPLLLARARICISASHTREDLIKALDVISRVGDLVGIKYFPAEPPKIA 480
Query: 481 EADHDKLE 488
EADHDKLE
Sbjct: 481 EADHDKLE 488
>Os01g0928800 Similar to Serine palmitoyltransferase
Length = 489
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/486 (88%), Positives = 449/486 (92%)
Query: 1 MVRLPYTTALTTLFSYGLLFAFGQLRDFFRKLIDWFKAKNVKGYAPICLGLEDFYVRRLY 60
MVRLPY TALTTLFSYGLLFAFGQLRDFFR+++D K+ N+KGYAPICLGLEDFY RRLY
Sbjct: 1 MVRLPYVTALTTLFSYGLLFAFGQLRDFFRRILDAGKSSNLKGYAPICLGLEDFYTRRLY 60
Query: 61 LRIQDCFGRPIASAPDAWFDVVERYSNDSNKTLKRTSNTTRCLNLGSYNYLGFAAADEYC 120
LRIQDCFGRPIASAPDAWFDVVERYSNDSNKTL RT+ T++CLNLGSYNYLGFAAADEYC
Sbjct: 61 LRIQDCFGRPIASAPDAWFDVVERYSNDSNKTLHRTTKTSKCLNLGSYNYLGFAAADEYC 120
Query: 121 TPLVIESLKKYSPSTCSVRVDGGTTKLHTELEELVARFVGKPAAILFGMGYVTNSAIIPC 180
TP VIESLKKYS STCSVRVDGG TKLH ELEELVARFVGKPAAILFGMGYVTNSAIIP
Sbjct: 121 TPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVGKPAAILFGMGYVTNSAIIPA 180
Query: 181 LVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNSPAHLEEVLREQIAGGQPRTHRPWK 240
LVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHN+PAHLEEVLREQIAGGQPRTHRPWK
Sbjct: 181 LVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNNPAHLEEVLREQIAGGQPRTHRPWK 240
Query: 241 KIIVIVEGIYSMEGELCKLPEIIAVCKKYKAYTYLDEAHSIGAVGQSGRGVCELLGVDPA 300
KIIVIVEGIYSMEGELCKLPE+IAVCKKYKAYTYLDEAHSIGAVG++GRGVCELLGVDPA
Sbjct: 241 KIIVIVEGIYSMEGELCKLPEVIAVCKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDPA 300
Query: 301 DVDIMMGTFTKSFGSCGGYIAASKEIIQHLKLSCPAHIYATSMSPPAVQQVISAIKVILG 360
DVDIMMGTFTKSFGSCGGYIAASKEII HLK CPAHIYATSMSPPAVQQVISAIKVILG
Sbjct: 301 DVDIMMGTFTKSFGSCGGYIAASKEIIDHLKHICPAHIYATSMSPPAVQQVISAIKVILG 360
Query: 361 EDGSNRGAQKLARIRENSNFFRSELKKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR 420
EDGSNRGA+KLA+IRENSNFFRSEL+KMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR
Sbjct: 361 EDGSNRGAKKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR 420
Query: 421 QKXXXXXXXXXXXXLLLARARICISASHTREDLIKALDVISRVGDLVGIKYFPAEPPKIA 480
Q LLLARARICISASH+REDLIK L+VIS+VGDLVGIKYFP E K A
Sbjct: 421 QHVAVVTVAFPATPLLLARARICISASHSREDLIKGLEVISKVGDLVGIKYFPVEHEKTA 480
Query: 481 EADHDK 486
+ K
Sbjct: 481 SVEKLK 486
>Os01g0928700 Similar to Serine palmitoyltransferase
Length = 497
Score = 837 bits (2161), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/494 (82%), Positives = 435/494 (88%), Gaps = 8/494 (1%)
Query: 1 MVRLPYTTALTTLFSYGLLFAFGQLRDFFRKLIDWF--------KAKNVKGYAPICLGLE 52
MVR+P+ TA+TT+FSYG++F FG LRD+FR L+ N+KGYAPIC G E
Sbjct: 1 MVRVPFVTAVTTVFSYGVIFGFGHLRDWFRALLRSLFSGHSPAAAGTNLKGYAPICGGQE 60
Query: 53 DFYVRRLYLRIQDCFGRPIASAPDAWFDVVERYSNDSNKTLKRTSNTTRCLNLGSYNYLG 112
DFY RR R+QDCF RPIAS PDAWFDVVERYSNDSNKTL RT+ T+RCLNLGSYNYLG
Sbjct: 61 DFYYRRFVRRVQDCFWRPIASKPDAWFDVVERYSNDSNKTLHRTTKTSRCLNLGSYNYLG 120
Query: 113 FAAADEYCTPLVIESLKKYSPSTCSVRVDGGTTKLHTELEELVARFVGKPAAILFGMGYV 172
FAAADEYCTP VIESLKKYS STCSVRVDGG TKLH ELEELVARFVGKPAAILFGMGYV
Sbjct: 121 FAAADEYCTPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVGKPAAILFGMGYV 180
Query: 173 TNSAIIPCLVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNSPAHLEEVLREQIAGGQ 232
TNSAIIP L+GKGGLIISDSLNHNSIVNGARGSGA+V+VFQHN+PAHLEEVLREQIAGGQ
Sbjct: 181 TNSAIIPALIGKGGLIISDSLNHNSIVNGARGSGASVQVFQHNNPAHLEEVLREQIAGGQ 240
Query: 233 PRTHRPWKKIIVIVEGIYSMEGELCKLPEIIAVCKKYKAYTYLDEAHSIGAVGQSGRGVC 292
PRTHR WKKIIVIVEGIYSMEGELCKLPEI+AVCKKYKAYTYLDEAHSIGAVG++GRGVC
Sbjct: 241 PRTHRRWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYTYLDEAHSIGAVGKTGRGVC 300
Query: 293 ELLGVDPADVDIMMGTFTKSFGSCGGYIAASKEIIQHLKLSCPAHIYATSMSPPAVQQVI 352
ELLGVDPADVDIMMGTFTKSFGSCGGYIAASKEII HLK CPAHIYATSMSPPAVQQVI
Sbjct: 301 ELLGVDPADVDIMMGTFTKSFGSCGGYIAASKEIIDHLKHICPAHIYATSMSPPAVQQVI 360
Query: 353 SAIKVILGEDGSNRGAQKLARIRENSNFFRSELKKMGFEVLGDNDSPVMPIMLYNPAKIP 412
SAI+VILGEDGS+RGA+KLA+IRENSNFFRSEL+KMGFEVLGDNDSPVMPIMLYNPAK+P
Sbjct: 361 SAIEVILGEDGSDRGAKKLAQIRENSNFFRSELEKMGFEVLGDNDSPVMPIMLYNPAKMP 420
Query: 413 AFSRECLRQKXXXXXXXXXXXXLLLARARICISASHTREDLIKALDVISRVGDLVGIKYF 472
AFSRECLRQK LLLARARICISASH+REDLIK L+VIS+VGDLVGIKY
Sbjct: 421 AFSRECLRQKVAIVTVSFPATPLLLARARICISASHSREDLIKGLEVISKVGDLVGIKYL 480
Query: 473 PAEPPKIAEADHDK 486
P E K A+ K
Sbjct: 481 PVEHEKTTSAEKLK 494
>Os02g0806900 Aminotransferase, class I and II domain containing protein
Length = 481
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 176/374 (47%), Gaps = 22/374 (5%)
Query: 103 LNLGSYNYLGFAAADEYCTPLVIESLKKYSPSTCSVRVDGGTTKLHTELEELVARFVGKP 162
+N S NYLG +E I S++KY +C R GT +H + E +A+F+G
Sbjct: 114 VNFASANYLGLIG-NEKILDSCIGSVEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTQ 172
Query: 163 AAILFGMGYVTNSAIIPCLVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNSPAHLEE 222
+IL+ G T ++IP KG +I++D H ++ NG + S +TV F+HN A L
Sbjct: 173 DSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLQLSRSTVVYFKHNDMASLAS 232
Query: 223 VLREQIAGGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIIAVCKKYKAYTYLDEAHSIG 282
L E++ G RT + + I+V E IY G++ L EI+ + +KY+ L+E+HS G
Sbjct: 233 TL-EKLTHGNKRTEKIRRYIVV--EAIYQNSGQIAPLDEIVRLKEKYRFRVILEESHSFG 289
Query: 283 AVGQSGRGVCELLGVDPADVDIMMGTFTKSFGSCGGYIAASKEIIQHLKLSCPAHIYATS 342
+G+SGRG+ E GV +DI+ + + GG+ S ++ H +LS ++++ S
Sbjct: 290 VLGKSGRGLAEHYGVPIEKIDIITAGMGNALATDGGFCTGSIRVVDHQRLSSSGYVFSAS 349
Query: 343 MSPPAVQQVISAIKVILGEDGSNRGAQKLARIRENSNFFRSELKKM-GFEVLGDNDSPVM 401
+ P ISA+ D LA +R N EL + G E+ + SP++
Sbjct: 350 LPPYLASAAISAV------DHLEENPSVLANLRSNITLLHKELSDVQGLEIASNILSPIV 403
Query: 402 PIMLYNPAK--------IPAFSRECLRQKXXXXXXXXXXXX---LLLARARICISASHTR 450
+ L + S + L++ L R+ +SA HT
Sbjct: 404 FLKLKTSTGSAVADLELLEVISEKVLKEDSVFIAATKRSSLDKCRLPVGIRLFVSAGHTE 463
Query: 451 EDLIKALDVISRVG 464
D++K + + RV
Sbjct: 464 SDILKVSESLKRVA 477
>Os03g0252800 Aminotransferase, class I and II domain containing protein
Length = 485
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 11/311 (3%)
Query: 96 TSNTTRCLNLGSYNYLGFAAADEYCTPLVIESLKKYSPSTCSVRVDGGTTKLHTELEELV 155
T + +N S NYLG +E + SL+KY +C R GT +H + E +
Sbjct: 107 TIDGKEVINFASANYLGLIG-NEKIIDSCVGSLEKYGVGSCGPRGFYGTIDVHLDCEAKI 165
Query: 156 ARFVGKPAAILFGMGYVTNSAIIPCLVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHN 215
A+F+G P +IL+ G T ++IP KG +I++D H ++ NG S +TV F+HN
Sbjct: 166 AKFLGTPDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLHLSRSTVVYFKHN 225
Query: 216 SPAHLEEVLREQIAGGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIIAVCKKYKAYTYL 275
A L L E++ G R + + I+V E IY G++ L EI+ + +KY+ L
Sbjct: 226 DMASLANTL-EKLTRGNKRAEKIRRYIVV--ESIYQNSGQIAPLDEIVRLKEKYRFRVIL 282
Query: 276 DEAHSIGAVGQSGRGVCELLGVDPADVDIMMGTFTKSFGSCGGYIAASKEIIQHLKLSCP 335
+E+HS G +GQSGRG+ E GV +DI+ + + GG+ S ++ H +LS
Sbjct: 283 EESHSFGVLGQSGRGLAEHYGVPIDKIDIITAGMGNALATDGGFCTGSVRVVDHQRLSSS 342
Query: 336 AHIYATSMSPPAVQQVISAIKVILGEDGSNRGAQKLARIRENSNFFRSELKKM-GFEVLG 394
++++ S+ P +SA+ + G LA +R N +F EL G E+
Sbjct: 343 GYVFSASLPPYLASAAVSAVSYLEGN------PSVLADLRSNISFLHKELSGTPGLEISS 396
Query: 395 DNDSPVMPIML 405
SP++ + L
Sbjct: 397 HVLSPIVFLKL 407
>Os10g0189600 Aminotransferase, class I and II domain containing protein
Length = 482
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 173/381 (45%), Gaps = 22/381 (5%)
Query: 96 TSNTTRCLNLGSYNYLGFAAADEYCTPLVIESLKKYSPSTCSVRVDGGTTKLHTELEELV 155
T + +N S NYLG +E + S++KY +C R GT +H + E +
Sbjct: 108 TVDGKEVVNFASANYLGLIG-NEKIIDSCVGSVEKYGVGSCGPRSFYGTIDVHLDCESKI 166
Query: 156 ARFVGKPAAILFGMGYVTNSAIIPCLVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHN 215
A F+G +IL+ G T ++IP KG +I++D H ++ NG + S +TV F+HN
Sbjct: 167 ANFLGTQDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLQLSRSTVVYFKHN 226
Query: 216 SPAHLEEVLREQIAGGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIIAVCKKYKAYTYL 275
A L +L E++ G T + + I+V E IY G++ L EI+ + +KY+ L
Sbjct: 227 DMASLASIL-EKLTHGNKHTEKIRRYIVV--EAIYQNSGQIAPLDEIVRLKEKYRFRVIL 283
Query: 276 DEAHSIGAVGQSGRGVCELLGVDPADVDIMMGTFTKSFGSCGGYIAASKEIIQHLKLSCP 335
+E+HS G +G+SGRG+ E GV +DI+ + + GG+ S ++ H +LS
Sbjct: 284 EESHSFGVLGKSGRGLAEHYGVPVEKIDIITAGMGNALATDGGFCTGSVRVVDHQRLSSS 343
Query: 336 AHIYATSMSPPAVQQVISAIKVILGEDGSNRGAQKLARIRENSNFFRSELKKM-GFEVLG 394
++++ S+ P +SA+ + LA +R N EL + G E+
Sbjct: 344 GYVFSASLPPYLASAAMSAVNHL------EENPSVLANLRSNIALLHKELSDIPGLEIAS 397
Query: 395 DNDSPVMPIMLYNPAKIPAFSRECLRQKXXXXXXXXXXXXLLLARA-----------RIC 443
+ SP++ + L P E L R+ R+
Sbjct: 398 NILSPIVFLKLKTPTGSAVADLELLEIIAEKVLMEDSVFIAATKRSSLDKCRLPVGIRLF 457
Query: 444 ISASHTREDLIKALDVISRVG 464
+SA HT D+ K + RV
Sbjct: 458 VSAGHTESDIFKVSASLKRVA 478
>Os01g0928600 Similar to Serine palmitoyltransferase (Fragment)
Length = 115
Score = 109 bits (273), Expect = 4e-24, Method: Composition-based stats.
Identities = 46/55 (83%), Positives = 54/55 (98%)
Query: 367 GAQKLARIRENSNFFRSELKKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQ 421
GA+K+A+IR+NSNFFRSEL+KMGFEVLGDNDSPVMP M+YNPAK+PAFSRECL+Q
Sbjct: 2 GAKKIAQIRDNSNFFRSELQKMGFEVLGDNDSPVMPFMVYNPAKMPAFSRECLKQ 56
>Os01g0736400 Aminotransferase, class I and II domain containing protein
Length = 362
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 153/337 (45%), Gaps = 42/337 (12%)
Query: 143 GTTKLHTELEELVARFVGKPAAILFGMGYVTNSAIIPCL--------------VGKGGLI 188
G T H +EE +A K +L G+ N A++ L G+ +
Sbjct: 32 GYTTYHKLVEESLAELKKKEDCLLCPTGFSANMAVMTALGSVSSILSVGRKPAEGERIAV 91
Query: 189 ISDSLNHNSIVNG----ARGSGATVRVFQHNSPAHLEEVLREQIAGGQPRTHRPWKKIIV 244
SD+LNH SI++G R V++H HL+ +L + +K +V
Sbjct: 92 FSDALNHASIIDGIRLVERQQEVVAFVYKHCDMHHLDFLL----------SSCSIEKKVV 141
Query: 245 IVEGIYSMEGELCKLPEIIAVCKKYKAYTYLDEAHSIGAVGQSGRGVCELLGVDPADVDI 304
+ + ++SM+G+ LPE++ + +KY +D+AH G++G G EL G + D+DI
Sbjct: 142 VTDSLFSMDGDFAPLPELVKLRRKYGFLLVIDDAHGTLVCGENGGGAPELFGCE-NDIDI 200
Query: 305 MMGTFTKSFGSCGGYIAASKEIIQHLKLSCPAHIYATSMSPPAVQQVISAIKVILGEDGS 364
+GT +K+ G GG+I S + ++ + I++T++ P V V +A+ V S
Sbjct: 201 SVGTLSKAAGCQGGFIVCSNRWKRLIQSRGRSFIFSTALPVPVVASVYAALHV------S 254
Query: 365 NRGAQKLARIRENSNFFRSELKKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQKXX 424
+ + + I + +F S L K+ D SP++ I++ + R LR
Sbjct: 255 KKERWRRSVIWRHVQYFAS-LTKL------DLTSPIISIVVGSEEAALRAGRHMLRSGFH 307
Query: 425 XXXXXXXXXXLLLARARICISASHTREDLIKALDVIS 461
R RI +SASH+ +D+ + +D +S
Sbjct: 308 VTPIRPPTVPQNSCRLRITLSASHSLDDIKRLVDALS 344
>Os10g0560900 Aminotransferase, class I and II domain containing protein
Length = 450
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 152/337 (45%), Gaps = 42/337 (12%)
Query: 143 GTTKLHTELEELVARFVGKPAAILFGMGYVTNSAIIPCLVGKGGL--------------I 188
G T H +EE +A K +L G+ N A++ L L I
Sbjct: 120 GYTTYHKMVEESLAELKKKEDCLLCPTGFSANMAVMTALGNISSLLAAGRKPAEDERIAI 179
Query: 189 ISDSLNHNSIVNG----ARGSGATVRVFQHNSPAHLEEVLREQIAGGQPRTHRPWKKIIV 244
SD+LNH SI++G R V++H +HLE +L + +K +V
Sbjct: 180 FSDALNHASIIDGIRLVERQQEVVSFVYKHCDMSHLELLL----------SSCSMEKKVV 229
Query: 245 IVEGIYSMEGELCKLPEIIAVCKKYKAYTYLDEAHSIGAVGQSGRGVCELLGVDPADVDI 304
+ + ++SM+G+ LPE++ + +KY +D+AH G++G G EL + ++DI
Sbjct: 230 VTDSLFSMDGDFAPLPELVKLRRKYGFLLVIDDAHGTLVCGENGGGAPELFECE-NEIDI 288
Query: 305 MMGTFTKSFGSCGGYIAASKEIIQHLKLSCPAHIYATSMSPPAVQQVISAIKVILGEDGS 364
+GT +K+ G GG+IA S + ++ + I++T++ P V V +A+ V S
Sbjct: 289 SVGTLSKAAGCQGGFIACSTRWKRLIQSRGRSFIFSTALPVPVVASVYAALYV------S 342
Query: 365 NRGAQKLARIRENSNFFRSELKKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQKXX 424
+ + I + +F S L K+ SP++ I++ + R+ LR
Sbjct: 343 REERWRRSVIWRHVQYFAS-LTKLNIT------SPIISIVVGSEKAALRAGRDMLRSGFH 395
Query: 425 XXXXXXXXXXLLLARARICISASHTREDLIKALDVIS 461
R RI +SASH+ +D+ + +D ++
Sbjct: 396 VTPIRPPTVPPNSCRLRITLSASHSSDDIKRLVDALT 432
>AK107303
Length = 477
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 122/249 (48%), Gaps = 19/249 (7%)
Query: 139 RVDGGTTKLHTELEELVAR-FVGKPAAILFGMGYVTNSAIIPCLVGKGGLIISDSLNHNS 197
R+ G + H +E+ + R F A +LF GY N +++ L ++I D L H S
Sbjct: 83 RLLDGNSSAHEAIEDDLTRHFASSEAGLLFNSGYEANVSLLSTLPQPKDVVIYDELVHAS 142
Query: 198 IVNGARGS--GATVRV-FQHNSPAHLEEVLRE-----QIAGGQPRTHRPWKKIIVIVEGI 249
+ +G R S A +R+ F+HNS HL ++L + G + + + VE I
Sbjct: 143 VHDGLRRSRVPAHLRIPFRHNSVDHLRDILSRLRQDGTLTAGTSAAPGEQRNVWLAVESI 202
Query: 250 YSMEGELCKLPEIIAVCK----KYKAYTYLDEAHSIGAVGQSGRGVCELLGV-DPADVDI 304
YSM+G+ C L ++ +++ +DEAHS G GRG+ LG+ D +
Sbjct: 203 YSMDGDACPLRALLDTLSQHVPQHRICAVVDEAHSTAVYGSRGRGLVNALGLQDDPRITA 262
Query: 305 MMGTFTKSFGSCGGYIAASKEIIQHLKLSCPAHIYATSMSPPAVQQVISAIKVILGEDGS 364
+ TF K++G+ G + SK +L I++T++ P + +++A + + +DGS
Sbjct: 263 RLMTFGKAWGASGAIVLCSKIARHYLINYARPLIFSTALGYPQLASILAAFRSV--QDGS 320
Query: 365 NRGAQKLAR 373
A+K AR
Sbjct: 321 ---AEKRAR 326
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.138 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,956,297
Number of extensions: 726401
Number of successful extensions: 1664
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 1652
Number of HSP's successfully gapped: 10
Length of query: 488
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 383
Effective length of database: 11,553,331
Effective search space: 4424925773
Effective search space used: 4424925773
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)