Os11g0516000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Serine palmitoyltransferase (Fragment).
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Os11g0516000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Serine palmitoyltransferase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 88.03 | 0.441 | 11.4 | 0.426 | 1.01 | 1.08 | 1.16 | -1.52 | 0.401 | 17.5 | 54 | 1006 | -- | -- |
| 91.25 | 0.445 | 11.4 | 0.353 | 0.991 | 1.02 | 1.11 | -- | 0.352 | 17.4 | 50 | 1027 | -- | -- |
| 90.65 | 0.443 | 11.4 | 0.432 | 1.01 | 1.05 | -- | -1.61 | 0.397 | 17.1 | 47.25 | 1018 | -- | -- |
| 93.02 | 0.449 | 11.4 | 0.304 | 0.935 | 0.833 | -- | -- | 0.377 | 16.5 | 40.88 | 1204 | -- | -- |
| 135.07 | 0.541 | 11.4 | 0.416 | -- | 1.27 | -- | -1.32 | 0.39 | -- | 42 | 1189 | -- | -- |
| 106.42 | 0.484 | 11.4 | 0.245 | 1.05 | -- | 0.402 | -- | 0.346 | 16.1 | -- | -- | -- | -- |
| 106.82 | 0.484 | 11.4 | 0.25 | 1.05 | -- | -- | -- | 0.348 | 16 | -- | -- | -- | -- |
| 137.26 | 0.546 | 11.4 | 0.281 | -- | 1.17 | -- | -- | 0.365 | -- | 44 | 1210 | -- | -- |
| 95.36 | 0.455 | 11.4 | -- | 0.934 | 0.818 | -- | -- | 0.349 | 16.4 | 44.14 | 1233 | -- | -- |
| 166.7 | 0.603 | 11.4 | 0.207 | -- | -- | -- | -- | 0.32 | -- | -- | -- | -- | -- |
| 108.46 | 0.487 | 11.4 | -- | 1.04 | -- | -- | -- | 0.32 | 16 | -- | -- | -- | -- |
| 139.4 | 0.55 | 11.4 | -- | -- | 1.13 | -- | -- | 0.334 | -- | 46 | 1210 | -- | -- |
| 167.83 | 0.605 | 11.4 | -- | -- | -- | -- | -- | 0.297 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 82.61 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 5 |
| 31 | 85.92 | humidity | 80 | 720 | < th | dose independent | rect. | 17 | 4 |
| 65 | 87.27 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 66 | 87.40 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 15 | 15 |
| 94 | 88.20 | humidity | 90 | 720 | < th | dose dependent | sin | 14 | NA |
| 95 | 88.23 | humidity | 50 | 720 | > th | dose dependent | sin | 12 | NA |
| 101 | 88.33 | humidity | 50 | 720 | > th | dose dependent | rect. | 19 | 7 |
| 146 | 88.92 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 164 | 89.10 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 189 | 89.43 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 15 |
| 190 | 89.44 | atmosphere | 1005 | 270 | > th | dose independent | sin | 12 | NA |
| 198 | 89.50 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 16 | 14 |
| 221 | 89.76 | humidity | 70 | 720 | > th | dose independent | sin | 11 | NA |
| 223 | 89.77 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 5 |
| 247 | 89.92 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 16 | 17 |
| 264 | 90.02 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 18 | 12 |
| 272 | 90.05 | humidity | 70 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 286 | 90.13 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 1 |
| 296 | 90.14 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 298 | 90.15 | humidity | 70 | 720 | > th | dose dependent | rect. | 18 | 21 |
| 314 | 90.24 | humidity | 80 | 720 | < th | dose independent | sin | 16 | NA |
| 328 | 90.31 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 18 | 15 |
| 372 | 90.49 | humidity | 80 | 720 | > th | dose independent | rect. | 18 | 21 |
| 375 | 90.49 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 393 | 90.55 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 17 |
| 404 | 90.60 | humidity | 80 | 720 | < th | dose independent | rect. | 9 | 13 |
| 496 | 90.88 | atmosphere | 1005 | 10 | > th | dose independent | sin | 10 | NA |
| 546 | 91.03 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 561 | 91.04 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 10 |
| 568 | 91.06 | humidity | 80 | 720 | > th | dose independent | rect. | 20 | 2 |
| 633 | 91.14 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 746 | 91.37 | humidity | 80 | 720 | < th | dose independent | rect. | 12 | 15 |
| 753 | 91.38 | humidity | 80 | 720 | > th | dose independent | rect. | 23 | 23 |
| 806 | 91.46 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 807 | 91.46 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 8 |
| 810 | 91.46 | humidity | 80 | 720 | < th | dose independent | rect. | 9 | 18 |
| 847 | 91.51 | radiation | 10 | 1440 | < th | dose dependent | sin | 19 | NA |
| 858 | 91.53 | humidity | 70 | 720 | > th | dose independent | rect. | 19 | 8 |
| 866 | 91.54 | temperature | 20 | 10 | < th | dose independent | rect. | 18 | 12 |
| 957 | 91.65 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 959 | 91.65 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 977 | 91.68 | humidity | 80 | 720 | > th | dose independent | rect. | 9 | 23 |