Os01g0928800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Serine palmitoyltransferase.
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Os01g0928800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Serine palmitoyltransferase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.03 | 0.329 | 11.7 | 0.75 | 1.23 | -0.977 | 0.245 | 0.00271 | 0.571 | 23.6 | 21.27 | 725 | -- | -- |
| 49.02 | 0.326 | 11.7 | 0.75 | 1.23 | -0.967 | 0.242 | -- | 0.569 | 23.6 | 21.4 | 723 | -- | -- |
| 49.24 | 0.327 | 11.7 | 0.758 | 1.23 | -1.01 | -- | -0.163 | 0.572 | 23.6 | 21.33 | 701 | -- | -- |
| 49.27 | 0.327 | 11.7 | 0.745 | 1.24 | -0.96 | -- | -- | 0.568 | 23.6 | 21.4 | 705 | -- | -- |
| 137.97 | 0.547 | 11.7 | 0.571 | -- | -1.3 | -- | 0.286 | 0.39 | -- | 26.82 | 854 | -- | -- |
| 57.98 | 0.357 | 11.7 | 0.981 | 1.31 | -- | 0.177 | -- | 0.681 | 23.5 | -- | -- | -- | -- |
| 58.11 | 0.357 | 11.7 | 0.974 | 1.31 | -- | -- | -- | 0.68 | 23.5 | -- | -- | -- | -- |
| 138.07 | 0.547 | 11.7 | 0.626 | -- | -1.32 | -- | -- | 0.402 | -- | 26.7 | 850 | -- | -- |
| 61.97 | 0.367 | 11.8 | -- | 1.28 | -1.17 | -- | -- | 0.432 | 23.4 | 20.77 | 2591 | -- | -- |
| 166.51 | 0.603 | 11.7 | 1.01 | -- | -- | -- | -- | 0.695 | -- | -- | -- | -- | -- |
| 83.1 | 0.426 | 11.7 | -- | 1.32 | -- | -- | -- | 0.572 | 23.6 | -- | -- | -- | -- |
| 147.23 | 0.565 | 11.8 | -- | -- | -1.57 | -- | -- | 0.283 | -- | 26.66 | 837 | -- | -- |
| 193.4 | 0.649 | 11.7 | -- | -- | -- | -- | -- | 0.583 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.55 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 14 | 16 |
| 26 | 48.19 | temperature | 20.0 | 720 | < th | dose dependent | sin | 13 | NA |
| 32 | 48.33 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 17 |
| 38 | 48.38 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 24 | 17 |
| 39 | 48.38 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 24 | 17 |
| 41 | 48.39 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 24 | 17 |
| 84 | 48.84 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 3 | NA |
| 85 | 48.84 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 3 | NA |
| 94 | 48.88 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 3 | NA |
| 107 | 48.96 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 4 | NA |
| 109 | 48.98 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 4 |
| 110 | 48.98 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 4 |
| 111 | 48.99 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 4 |
| 112 | 49.00 | temperature | 20.0 | 720 | > th | dose independent | rect. | 18 | 14 |
| 113 | 49.00 | temperature | 20.0 | 720 | > th | dose independent | rect. | 12 | 19 |
| 118 | 49.01 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 13 |
| 123 | 49.02 | temperature | 20.0 | 720 | > th | dose independent | rect. | 16 | 16 |
| 128 | 49.04 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 4 |
| 192 | 49.21 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 6 | 11 |
| 211 | 49.29 | temperature | 20.0 | 720 | > th | dose independent | sin | 11 | NA |
| 225 | 49.32 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 6 | 11 |
| 229 | 49.33 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 6 | 11 |
| 234 | 49.33 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 6 | 11 |
| 251 | 49.36 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 9 | 8 |
| 266 | 49.40 | temperature | 20.0 | 720 | > th | dose independent | rect. | 1 | 5 |
| 290 | 49.44 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 1 | 16 |
| 298 | 49.48 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 9 | 8 |
| 322 | 49.52 | temperature | 20.0 | 720 | < th | dose dependent | no | NA | NA |
| 326 | 49.54 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 17 | 20 |
| 327 | 49.55 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 9 | 8 |
| 330 | 49.55 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 9 | 8 |
| 333 | 49.56 | humidity | 50.0 | 10 | > th | dose dependent | sin | 3 | NA |
| 358 | 49.60 | temperature | 20.0 | 720 | < th | dose independent | rect. | 12 | 21 |
| 361 | 49.60 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 363 | 49.60 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 368 | 49.61 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 370 | 49.62 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 20 |
| 372 | 49.62 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 16 | 23 |
| 407 | 49.68 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 412 | 49.68 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 433 | 49.73 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 23 | 21 |
| 448 | 49.75 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 459 | 49.78 | temperature | 20.0 | 720 | < th | dose independent | rect. | 23 | 21 |
| 474 | 49.82 | temperature | 20.0 | 720 | > th | dose independent | rect. | 18 | 19 |
| 485 | 49.84 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 6 | 7 |
| 486 | 49.85 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 489 | 49.85 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 498 | 49.86 | temperature | 20.0 | 720 | < th | dose independent | rect. | 15 | 18 |
| 504 | 49.87 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 5 |
| 510 | 49.87 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 536 | 49.91 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 5 |
| 543 | 49.91 | temperature | 20.0 | 720 | > th | dose independent | rect. | 18 | 21 |
| 578 | 49.94 | temperature | 20.0 | 720 | > th | dose independent | rect. | 18 | 23 |
| 588 | 49.97 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 605 | 49.98 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 20 | 17 |
| 609 | 49.98 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 22 |
| 612 | 49.99 | temperature | 20.0 | 720 | > th | dose independent | rect. | 16 | 21 |
| 621 | 50.00 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 634 | 50.01 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 639 | 50.01 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 693 | 50.07 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 16 |
| 700 | 50.08 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 704 | 50.09 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 713 | 50.09 | humidity | 90.0 | 10 | < th | dose dependent | sin | 2 | NA |
| 730 | 50.10 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 6 | NA |
| 737 | 50.11 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 23 | 2 |
| 742 | 50.11 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 11 |
| 747 | 50.12 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 23 | 2 |
| 750 | 50.12 | temperature | 20.0 | 720 | > th | dose independent | rect. | 1 | 20 |
| 767 | 50.13 | temperature | 20.0 | 720 | < th | dose independent | rect. | 16 | 22 |
| 781 | 50.14 | temperature | 20.0 | 720 | > th | dose independent | rect. | 23 | 22 |
| 792 | 50.15 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 2 | 11 |
| 793 | 50.15 | temperature | 20.0 | 720 | > th | dose independent | rect. | 1 | 22 |
| 807 | 50.15 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 19 | 20 |
| 810 | 50.15 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 812 | 50.16 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 4 | 9 |
| 824 | 50.16 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 6 | 21 |
| 826 | 50.16 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 4 | 23 |
| 827 | 50.16 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 6 | 23 |
| 832 | 50.17 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 6 | 7 |
| 842 | 50.17 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 17 | 19 |
| 846 | 50.18 | temperature | 20.0 | 720 | < th | dose independent | sin | 9 | NA |
| 847 | 50.18 | wind | 7.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 848 | 50.18 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 878 | 50.20 | temperature | 20.0 | 720 | > th | dose independent | no | NA | NA |
| 892 | 50.20 | temperature | 20.0 | 720 | < th | dose independent | rect. | 8 | 23 |
| 908 | 50.21 | temperature | 20.0 | 720 | < th | dose independent | no | NA | NA |
| 909 | 50.21 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 6 | 7 |
| 939 | 50.22 | temperature | 20.0 | 720 | > th | dose independent | rect. | 1 | 16 |
| 970 | 50.24 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 24 | 11 |
| 978 | 50.24 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 24 | 11 |
| 982 | 50.25 | wind | 7.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 983 | 50.25 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 984 | 50.25 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 994 | 50.25 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 995 | 50.25 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 997 | 50.25 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 22 | 14 |