BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0928800 Os01g0928800|AK120617
(489 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G23670.1 | chr5:7981889-7985037 FORWARD LENGTH=490 826 0.0
AT3G48780.1 | chr3:18089346-18092276 FORWARD LENGTH=490 804 0.0
AT3G48790.1 | chr3:18093404-18095181 FORWARD LENGTH=351 508 e-144
AT4G36480.1 | chr4:17218598-17221124 FORWARD LENGTH=483 134 1e-31
AT5G04620.2 | chr5:1327292-1329934 FORWARD LENGTH=477 91 1e-18
>AT5G23670.1 | chr5:7981889-7985037 FORWARD LENGTH=490
Length = 489
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/478 (80%), Positives = 427/478 (89%)
Query: 1 MVRLPYVTALTTLFSYGLLFAFGQLRDFFRRILDAGKSSNLKGYAPICLGLEDFYTRRLY 60
M+ +PY+TA++T FSYGLLFAFGQLRDFFRR +D +SNL+GYAPICLG EDFY RRLY
Sbjct: 1 MITIPYLTAVSTYFSYGLLFAFGQLRDFFRRFIDWWFTSNLQGYAPICLGHEDFYIRRLY 60
Query: 61 LRIQDCFGRPIASAPDAWFDVVERYSNDSNKTLHRTTKTSKCLNLGSYNYLGFAAADEYC 120
RIQDCF RPI+SAPDAWFDVVERYSND+NKTL RTTKTS+CLNLGSYNYLGF + DEYC
Sbjct: 61 HRIQDCFERPISSAPDAWFDVVERYSNDNNKTLKRTTKTSRCLNLGSYNYLGFGSFDEYC 120
Query: 121 TPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVGKPAAILFGMGYVTNSAIIPA 180
TPRVIESLKK+SASTCS RVD G T +H ELEE V RFVGKPAA++FGMGY TNSAIIP
Sbjct: 121 TPRVIESLKKFSASTCSSRVDAGTTSVHAELEECVTRFVGKPAAVVFGMGYATNSAIIPV 180
Query: 181 LVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNNPAHLEEVLREQIAGGQPRTHRPWK 240
L+GKGGLIISDSLNH+SIVNGARGSGAT+RVFQHN P+HLE VLREQIA GQPRTHRPWK
Sbjct: 181 LIGKGGLIISDSLNHSSIVNGARGSGATIRVFQHNTPSHLERVLREQIAEGQPRTHRPWK 240
Query: 241 KIIVIVEGIYSMEGELCKLPEVIAVCKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDPA 300
KIIV+VEGIYSMEGE+C LPEV+A+CKKYKAY YLDEAHSIGA+GKTG+G+CELLGVD A
Sbjct: 241 KIIVVVEGIYSMEGEICHLPEVVAICKKYKAYVYLDEAHSIGAIGKTGKGICELLGVDTA 300
Query: 301 DVDIMMGTFTKSFGSCGGYIAASKEIIDHLKHICPAHIYATSMSPPAVQQVISAIKVILG 360
DVD+MMGTFTKSFGSCGGYIA SKE+I +LKH CPAH+YATS+ P+ QQ+ISAIKVILG
Sbjct: 301 DVDVMMGTFTKSFGSCGGYIAGSKELIQYLKHQCPAHLYATSIPTPSAQQIISAIKVILG 360
Query: 361 EDGSNRGAKKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR 420
EDGSNRGA+KLA+IRENSNFFR+ELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR
Sbjct: 361 EDGSNRGAQKLARIRENSNFFRAELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR 420
Query: 421 QHXXXXXXXXXXXXLLLARARICISASHSREDLIKGLEVISKVGDLVGIKYFPVEHEK 478
Q LLLARARICISASHSREDLI+ L+VISKVGDL GIKYFP E +K
Sbjct: 421 QKVAVVVVGFPATPLLLARARICISASHSREDLIRALKVISKVGDLSGIKYFPAEPKK 478
>AT3G48780.1 | chr3:18089346-18092276 FORWARD LENGTH=490
Length = 489
Score = 804 bits (2077), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/484 (77%), Positives = 426/484 (88%), Gaps = 1/484 (0%)
Query: 1 MVRLPYVTALTTLFSYGLLFAFGQLRDFFRRILDAGKSSNLKGYAPICLGLEDFYTRRLY 60
M+ +PY+TA++T FSYGLLFAFGQLRD+ R I D +++NL+GYAPICL EDFY RRLY
Sbjct: 1 MITIPYLTAVSTYFSYGLLFAFGQLRDYSRLIFDWWRTNNLQGYAPICLAHEDFYIRRLY 60
Query: 61 LRIQDCFGRPIASAPDAWFDVVERYSNDSNKTLHRTTKTSKCLNLGSYNYLGFAAADEYC 120
RIQDCFGRPI+SAPDAW DVVER S+D+NKTL RTTKTS+CLNLGSYNYLGF + DEYC
Sbjct: 61 HRIQDCFGRPISSAPDAWIDVVERVSDDNNKTLKRTTKTSRCLNLGSYNYLGFGSFDEYC 120
Query: 121 TPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVGKPAAILFGMGYVTNSAIIPA 180
TPRVIESLKK+SASTCS RVD G T +H ELE+ VA++VG+PAA++FGMGY TNSAIIP
Sbjct: 121 TPRVIESLKKFSASTCSSRVDAGTTSVHAELEDCVAKYVGQPAAVIFGMGYATNSAIIPV 180
Query: 181 LVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNNPAHLEEVLREQIAGGQPRTHRPWK 240
L+GKGGLIISDSLNH SIVNGARGSGAT+RVFQHN P HLE+VL+EQIA GQPRTHRPWK
Sbjct: 181 LIGKGGLIISDSLNHTSIVNGARGSGATIRVFQHNTPGHLEKVLKEQIAEGQPRTHRPWK 240
Query: 241 KIIVIVEGIYSMEGELCKLPEVIAVCKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDPA 300
KIIV+VEGIYSMEGE+C LPE++++CKKYKAY YLDEAHSIGA+GKTGRGVCELLGVD +
Sbjct: 241 KIIVVVEGIYSMEGEICHLPEIVSICKKYKAYVYLDEAHSIGAIGKTGRGVCELLGVDTS 300
Query: 301 DVDIMMGTFTKSFGSCGGYIAASKEIIDHLKHICPAHIYATSMSPPAVQQVISAIKVILG 360
DVDIMMGTFTKSFGSCGGYIA SK++I +LKH CPAH+YATS+S P+ Q+ISAIKVILG
Sbjct: 301 DVDIMMGTFTKSFGSCGGYIAGSKDLIQYLKHQCPAHLYATSISTPSATQIISAIKVILG 360
Query: 361 EDGSNRGAKKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR 420
EDGSNRGA+KLA+IRENSNFFR+ELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR
Sbjct: 361 EDGSNRGAQKLARIRENSNFFRAELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR 420
Query: 421 QHXXXXXXXXXXXXLLLARARICISASHSREDLIKGLEVISKVGDLVGIKYFPVEHEKTA 480
++ LLLARARICISASHSREDLIK L+VISK GDL GIKYFP +K
Sbjct: 421 ENLAVVVVGFPATPLLLARARICISASHSREDLIKALQVISKAGDLTGIKYFPAAPKKQ- 479
Query: 481 SVEK 484
VEK
Sbjct: 480 EVEK 483
>AT3G48790.1 | chr3:18093404-18095181 FORWARD LENGTH=351
Length = 350
Score = 508 bits (1307), Expect = e-144, Method: Compositional matrix adjust.
Identities = 248/348 (71%), Positives = 282/348 (81%), Gaps = 11/348 (3%)
Query: 143 GNTKLHVELEELVARFVGKPAAILFGMGYVTNSAIIPALVGKGGLIISDSLNHNSIVNGA 202
G T +H ELEE VA+FVGKPAA++FGMGY+TNSAII L+GKGGLIISDSLNH SI+NGA
Sbjct: 7 GTTAVHGELEECVAKFVGKPAAVVFGMGYLTNSAIISVLIGKGGLIISDSLNHTSIINGA 66
Query: 203 RGSGATVRVFQHNNPAHLEEVLREQIAGGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEV 262
RGSGAT+RVFQHN +L+E I GQPRTHRPWKKIIV+VEGIYSMEGE+C LPE+
Sbjct: 67 RGSGATIRVFQHN-------ILKEHIIEGQPRTHRPWKKIIVVVEGIYSMEGEICDLPEI 119
Query: 263 IAVCKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCGGYIAA 322
++VC +YKAY YLDEAHSIGA+GKTGRGVCELLGVD +VDIMMGTFTKS GSCGGYIA
Sbjct: 120 VSVCSEYKAYVYLDEAHSIGAIGKTGRGVCELLGVDTTEVDIMMGTFTKSLGSCGGYIAG 179
Query: 323 SKEIIDHLKHICPAHIYATSMSPPAVQQVISAIKVILGEDGSNRGAKKLAQIRENSNFFR 382
SK+++ +LK PAH+YATS+S PA QQVISAIKVI G DGSNRG KLA+IRENSNFFR
Sbjct: 180 SKDLVQYLKQHYPAHLYATSISTPAAQQVISAIKVIFGVDGSNRGELKLARIRENSNFFR 239
Query: 383 SELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQHXXXXXXXXXXXXLLLARARI 442
+ELQKMGF+VLG DSP+MPIMLYNPAKI AFSRECLR++ LLLARARI
Sbjct: 240 AELQKMGFKVLGVYDSPIMPIMLYNPAKIAAFSRECLRENLAIVVVSFPPIPLLLARARI 299
Query: 443 CISASHSREDLIKGLEVISKVGDLVGIKYFPV----EHEKTASVEKLK 486
C SASH REDLIK L+VIS+ GDL GIKYF + EK + K K
Sbjct: 300 CNSASHLREDLIKALQVISRAGDLTGIKYFTAAPKKQEEKNGNTSKFK 347
>AT4G36480.1 | chr4:17218598-17221124 FORWARD LENGTH=483
Length = 482
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 181/395 (45%), Gaps = 34/395 (8%)
Query: 94 HRTTKTSKCLNLGSYNYLGFAAAD---EYCTPRVIESLKKYSASTCSVRVDGGNTKLHVE 150
H T +N S NYLG + E CT +L+KY +C R G +H++
Sbjct: 103 HTTVNGKDVVNFASANYLGLIGHEKLLESCT----SALEKYGVGSCGPRGFYGTIDVHLD 158
Query: 151 LEELVARFVGKPAAILFGMGYVTNSAIIPALVGKGGLIISDSLNHNSIVNGARGSGATVR 210
E +++F+G P +IL+ G T + IP KG +I++D H I NG + S +T+
Sbjct: 159 CETRISKFLGTPDSILYSYGLSTMFSTIPCFCKKGDVIVADEGVHWGIQNGLQLSRSTIV 218
Query: 211 VFQHNNPAHLEEVLREQIAGGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEVIAVCKKYK 270
F+HN+ L L E+I R+ + I+ E +Y G++ L E++ + +KY+
Sbjct: 219 YFKHNDMESLRITL-EKIMTKYKRSKNLRRYIVA--EAVYQNSGQIAPLDEIVKLKEKYR 275
Query: 271 AYTYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCGGYIAASKEIIDHL 330
LDE++S G +G++GRG+ E V +D++ + + GG+ + IID+
Sbjct: 276 FRVILDESNSFGVLGRSGRGLAEHHSVPIEKIDVVTAAMGHALATEGGFCTGNARIIDYQ 335
Query: 331 KHICPAHIYATSMSPPAVQQVISAIKVILGEDGSNRGAKKLAQIRENSNFFRSELQKM-G 389
+ ++++ S+ P I+AI VI ++ L ++++N L + G
Sbjct: 336 RLSSSGYVFSASLPPYLASAAITAIDVI------DQNPDMLVKLKQNVALLWKGLSDIKG 389
Query: 390 FEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQHXXXXXXXXXXXXLLLARA--------- 440
+ + +SP++ + L K +++ L LL+ +
Sbjct: 390 MSLTSNRESPIVFLKL---EKSSGSAKDDLLLLEKMADRALKEDSLLVVSSKRSFLDKCR 446
Query: 441 -----RICISASHSREDLIKGLEVISKVGDLVGIK 470
++ +SA HS DL+K E + ++ + +K
Sbjct: 447 LPVGIKLYVSAGHSESDLLKASESLKRLASELLLK 481
>AT5G04620.2 | chr5:1327292-1329934 FORWARD LENGTH=477
Length = 476
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 167/390 (42%), Gaps = 43/390 (11%)
Query: 95 RTTKTSKCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSVRVDGGNTKLHVELEEL 154
R + K L +YLG ++ + ++K+Y + G T H LE
Sbjct: 97 RKGRFKKLLLFSGNDYLGLSSHPTI-SNAAANAVKEYGMGPKGSALICGYTTYHRLLESS 155
Query: 155 VARFVGKPAAILFGMGYVTNSAIIPALVGKGGL--------------IISDSLNHNSIVN 200
+A+ K ++ G+ N A + A+ L I SD+LNH SI++
Sbjct: 156 LAQLKKKEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIID 215
Query: 201 GAR----GSGATVRVFQHNNPAHLEEVLREQIAGGQPRTHRPWKKIIVIVEGIYSMEGEL 256
G R V V++H + HL +L ++ K+ +V+ + ++SM+G+
Sbjct: 216 GVRLAERQGNVEVFVYRHCDMYHLNSLL----------SNCKMKRKVVVTDSLFSMDGDF 265
Query: 257 CKLPEVIAVCKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSC 316
+ E+ + KKY +D+AH G+ G GV E + ADVD+ +GT +K+ G
Sbjct: 266 APMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCE-ADVDLCVGTLSKAAGCH 324
Query: 317 GGYIAASKEIIDHLKHICPAHIYATSMSPPAVQQVISAIKVILGEDGSNRGAKKLAQIRE 376
GG+IA SK+ ++ + I++T++ P +A+ V E + I E
Sbjct: 325 GGFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEIWRRKA------IWE 378
Query: 377 NSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQHXXXXXXXXXXXXLL 436
F+ EL + D SP++ +++ N K SR L+
Sbjct: 379 RVKEFK-ELSGV------DISSPIISLVVGNQEKALKASRYLLKSGFHVMAIRPPTVPPN 431
Query: 437 LARARICISASHSREDLIKGLEVISKVGDL 466
R R+ +SA+H+ ED+ K + +S D
Sbjct: 432 SCRLRVTLSAAHTTEDVKKLITALSSCLDF 461
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.138 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,562,482
Number of extensions: 451914
Number of successful extensions: 1031
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1026
Number of HSP's successfully gapped: 5
Length of query: 489
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 386
Effective length of database: 8,282,721
Effective search space: 3197130306
Effective search space used: 3197130306
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 114 (48.5 bits)