BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0928800 Os01g0928800|AK120617
(489 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0928800 Similar to Serine palmitoyltransferase 982 0.0
Os01g0928700 Similar to Serine palmitoyltransferase 902 0.0
Os11g0516000 Similar to Serine palmitoyltransferase (Fragment) 892 0.0
Os03g0252800 Aminotransferase, class I and II domain contai... 153 3e-37
Os02g0806900 Aminotransferase, class I and II domain contai... 152 8e-37
Os10g0189600 Aminotransferase, class I and II domain contai... 150 2e-36
Os01g0928600 Similar to Serine palmitoyltransferase (Fragment) 115 1e-25
Os01g0736400 Aminotransferase, class I and II domain contai... 100 3e-21
Os10g0560900 Aminotransferase, class I and II domain contai... 97 3e-20
AK107303 96 5e-20
>Os01g0928800 Similar to Serine palmitoyltransferase
Length = 489
Score = 982 bits (2539), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/489 (97%), Positives = 477/489 (97%)
Query: 1 MVRLPYVTALTTLFSYGLLFAFGQLRDFFRRILDAGKSSNLKGYAPICLGLEDFYTRRLY 60
MVRLPYVTALTTLFSYGLLFAFGQLRDFFRRILDAGKSSNLKGYAPICLGLEDFYTRRLY
Sbjct: 1 MVRLPYVTALTTLFSYGLLFAFGQLRDFFRRILDAGKSSNLKGYAPICLGLEDFYTRRLY 60
Query: 61 LRIQDCFGRPIASAPDAWFDVVERYSNDSNKTLHRTTKTSKCLNLGSYNYLGFAAADEYC 120
LRIQDCFGRPIASAPDAWFDVVERYSNDSNKTLHRTTKTSKCLNLGSYNYLGFAAADEYC
Sbjct: 61 LRIQDCFGRPIASAPDAWFDVVERYSNDSNKTLHRTTKTSKCLNLGSYNYLGFAAADEYC 120
Query: 121 TPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVGKPAAILFGMGYVTNSAIIPA 180
TPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVGKPAAILFGMGYVTNSAIIPA
Sbjct: 121 TPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVGKPAAILFGMGYVTNSAIIPA 180
Query: 181 LVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNNPAHLEEVLREQIAGGQPRTHRPWK 240
LVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNNPAHLEEVLREQIAGGQPRTHRPWK
Sbjct: 181 LVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNNPAHLEEVLREQIAGGQPRTHRPWK 240
Query: 241 KIIVIVEGIYSMEGELCKLPEVIAVCKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDPA 300
KIIVIVEGIYSMEGELCKLPEVIAVCKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDPA
Sbjct: 241 KIIVIVEGIYSMEGELCKLPEVIAVCKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDPA 300
Query: 301 DVDIMMGTFTKSFGSCGGYIAASKEIIDHLKHICPAHIYATSMSPPAVQQVISAIKVILG 360
DVDIMMGTFTKSFGSCGGYIAASKEIIDHLKHICPAHIYATSMSPPAVQQVISAIKVILG
Sbjct: 301 DVDIMMGTFTKSFGSCGGYIAASKEIIDHLKHICPAHIYATSMSPPAVQQVISAIKVILG 360
Query: 361 EDGSNRGAKKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR 420
EDGSNRGAKKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR
Sbjct: 361 EDGSNRGAKKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR 420
Query: 421 QHXXXXXXXXXXXXLLLARARICISASHSREDLIKGLEVISKVGDLVGIKYFPVEHEKTA 480
QH LLLARARICISASHSREDLIKGLEVISKVGDLVGIKYFPVEHEKTA
Sbjct: 421 QHVAVVTVAFPATPLLLARARICISASHSREDLIKGLEVISKVGDLVGIKYFPVEHEKTA 480
Query: 481 SVEKLKKLQ 489
SVEKLKKLQ
Sbjct: 481 SVEKLKKLQ 489
>Os01g0928700 Similar to Serine palmitoyltransferase
Length = 497
Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/497 (87%), Positives = 457/497 (91%), Gaps = 8/497 (1%)
Query: 1 MVRLPYVTALTTLFSYGLLFAFGQLRDFFRRIL--------DAGKSSNLKGYAPICLGLE 52
MVR+P+VTA+TT+FSYG++F FG LRD+FR +L A +NLKGYAPIC G E
Sbjct: 1 MVRVPFVTAVTTVFSYGVIFGFGHLRDWFRALLRSLFSGHSPAAAGTNLKGYAPICGGQE 60
Query: 53 DFYTRRLYLRIQDCFGRPIASAPDAWFDVVERYSNDSNKTLHRTTKTSKCLNLGSYNYLG 112
DFY RR R+QDCF RPIAS PDAWFDVVERYSNDSNKTLHRTTKTS+CLNLGSYNYLG
Sbjct: 61 DFYYRRFVRRVQDCFWRPIASKPDAWFDVVERYSNDSNKTLHRTTKTSRCLNLGSYNYLG 120
Query: 113 FAAADEYCTPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVGKPAAILFGMGYV 172
FAAADEYCTPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVGKPAAILFGMGYV
Sbjct: 121 FAAADEYCTPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVGKPAAILFGMGYV 180
Query: 173 TNSAIIPALVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNNPAHLEEVLREQIAGGQ 232
TNSAIIPAL+GKGGLIISDSLNHNSIVNGARGSGA+V+VFQHNNPAHLEEVLREQIAGGQ
Sbjct: 181 TNSAIIPALIGKGGLIISDSLNHNSIVNGARGSGASVQVFQHNNPAHLEEVLREQIAGGQ 240
Query: 233 PRTHRPWKKIIVIVEGIYSMEGELCKLPEVIAVCKKYKAYTYLDEAHSIGAVGKTGRGVC 292
PRTHR WKKIIVIVEGIYSMEGELCKLPE++AVCKKYKAYTYLDEAHSIGAVGKTGRGVC
Sbjct: 241 PRTHRRWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYTYLDEAHSIGAVGKTGRGVC 300
Query: 293 ELLGVDPADVDIMMGTFTKSFGSCGGYIAASKEIIDHLKHICPAHIYATSMSPPAVQQVI 352
ELLGVDPADVDIMMGTFTKSFGSCGGYIAASKEIIDHLKHICPAHIYATSMSPPAVQQVI
Sbjct: 301 ELLGVDPADVDIMMGTFTKSFGSCGGYIAASKEIIDHLKHICPAHIYATSMSPPAVQQVI 360
Query: 353 SAIKVILGEDGSNRGAKKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIP 412
SAI+VILGEDGS+RGAKKLAQIRENSNFFRSEL+KMGFEVLGDNDSPVMPIMLYNPAK+P
Sbjct: 361 SAIEVILGEDGSDRGAKKLAQIRENSNFFRSELEKMGFEVLGDNDSPVMPIMLYNPAKMP 420
Query: 413 AFSRECLRQHXXXXXXXXXXXXLLLARARICISASHSREDLIKGLEVISKVGDLVGIKYF 472
AFSRECLRQ LLLARARICISASHSREDLIKGLEVISKVGDLVGIKY
Sbjct: 421 AFSRECLRQKVAIVTVSFPATPLLLARARICISASHSREDLIKGLEVISKVGDLVGIKYL 480
Query: 473 PVEHEKTASVEKLKKLQ 489
PVEHEKT S EKLKK+Q
Sbjct: 481 PVEHEKTTSAEKLKKIQ 497
>Os11g0516000 Similar to Serine palmitoyltransferase (Fragment)
Length = 488
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/486 (88%), Positives = 449/486 (92%)
Query: 1 MVRLPYVTALTTLFSYGLLFAFGQLRDFFRRILDAGKSSNLKGYAPICLGLEDFYTRRLY 60
MVRLPY TALTTLFSYGLLFAFGQLRDFFR+++D K+ N+KGYAPICLGLEDFY RRLY
Sbjct: 1 MVRLPYTTALTTLFSYGLLFAFGQLRDFFRKLIDWFKAKNVKGYAPICLGLEDFYVRRLY 60
Query: 61 LRIQDCFGRPIASAPDAWFDVVERYSNDSNKTLHRTTKTSKCLNLGSYNYLGFAAADEYC 120
LRIQDCFGRPIASAPDAWFDVVERYSNDSNKTL RT+ T++CLNLGSYNYLGFAAADEYC
Sbjct: 61 LRIQDCFGRPIASAPDAWFDVVERYSNDSNKTLKRTSNTTRCLNLGSYNYLGFAAADEYC 120
Query: 121 TPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVGKPAAILFGMGYVTNSAIIPA 180
TP VIESLKKYS STCSVRVDGG TKLH ELEELVARFVGKPAAILFGMGYVTNSAIIP
Sbjct: 121 TPLVIESLKKYSPSTCSVRVDGGTTKLHTELEELVARFVGKPAAILFGMGYVTNSAIIPC 180
Query: 181 LVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNNPAHLEEVLREQIAGGQPRTHRPWK 240
LVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHN+PAHLEEVLREQIAGGQPRTHRPWK
Sbjct: 181 LVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNSPAHLEEVLREQIAGGQPRTHRPWK 240
Query: 241 KIIVIVEGIYSMEGELCKLPEVIAVCKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDPA 300
KIIVIVEGIYSMEGELCKLPE+IAVCKKYKAYTYLDEAHSIGAVG++GRGVCELLGVDPA
Sbjct: 241 KIIVIVEGIYSMEGELCKLPEIIAVCKKYKAYTYLDEAHSIGAVGQSGRGVCELLGVDPA 300
Query: 301 DVDIMMGTFTKSFGSCGGYIAASKEIIDHLKHICPAHIYATSMSPPAVQQVISAIKVILG 360
DVDIMMGTFTKSFGSCGGYIAASKEII HLK CPAHIYATSMSPPAVQQVISAIKVILG
Sbjct: 301 DVDIMMGTFTKSFGSCGGYIAASKEIIQHLKLSCPAHIYATSMSPPAVQQVISAIKVILG 360
Query: 361 EDGSNRGAKKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR 420
EDGSNRGA+KLA+IRENSNFFRSEL+KMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR
Sbjct: 361 EDGSNRGAQKLARIRENSNFFRSELKKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR 420
Query: 421 QHXXXXXXXXXXXXLLLARARICISASHSREDLIKGLEVISKVGDLVGIKYFPVEHEKTA 480
Q LLLARARICISASH+REDLIK L+VIS+VGDLVGIKYFP E K A
Sbjct: 421 QKVAVVTVAFPATPLLLARARICISASHTREDLIKALDVISRVGDLVGIKYFPAEPPKIA 480
Query: 481 SVEKLK 486
+ K
Sbjct: 481 EADHDK 486
>Os03g0252800 Aminotransferase, class I and II domain containing protein
Length = 485
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 158/313 (50%), Gaps = 11/313 (3%)
Query: 94 HRTTKTSKCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSVRVDGGNTKLHVELEE 153
H T + +N S NYLG +E + SL+KY +C R G +H++ E
Sbjct: 105 HTTIDGKEVINFASANYLGLIG-NEKIIDSCVGSLEKYGVGSCGPRGFYGTIDVHLDCEA 163
Query: 154 LVARFVGKPAAILFGMGYVTNSAIIPALVGKGGLIISDSLNHNSIVNGARGSGATVRVFQ 213
+A+F+G P +IL+ G T ++IPA KG +I++D H ++ NG S +TV F+
Sbjct: 164 KIAKFLGTPDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLHLSRSTVVYFK 223
Query: 214 HNNPAHLEEVLREQIAGGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEVIAVCKKYKAYT 273
HN+ A L L E++ G R + + I+V E IY G++ L E++ + +KY+
Sbjct: 224 HNDMASLANTL-EKLTRGNKRAEKIRRYIVV--ESIYQNSGQIAPLDEIVRLKEKYRFRV 280
Query: 274 YLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCGGYIAASKEIIDHLKHI 333
L+E+HS G +G++GRG+ E GV +DI+ + + GG+ S ++DH +
Sbjct: 281 ILEESHSFGVLGQSGRGLAEHYGVPIDKIDIITAGMGNALATDGGFCTGSVRVVDHQRLS 340
Query: 334 CPAHIYATSMSPPAVQQVISAIKVILGEDGSNRGAKKLAQIRENSNFFRSELQKM-GFEV 392
++++ S+ P +SA+ + G LA +R N +F EL G E+
Sbjct: 341 SSGYVFSASLPPYLASAAVSAVSYLEGN------PSVLADLRSNISFLHKELSGTPGLEI 394
Query: 393 LGDNDSPVMPIML 405
SP++ + L
Sbjct: 395 SSHVLSPIVFLKL 407
>Os02g0806900 Aminotransferase, class I and II domain containing protein
Length = 481
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 179/383 (46%), Gaps = 22/383 (5%)
Query: 94 HRTTKTSKCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSVRVDGGNTKLHVELEE 153
H + +N S NYLG +E I S++KY +C R G +H++ E
Sbjct: 105 HTIVDGKEVVNFASANYLGLIG-NEKILDSCIGSVEKYGVGSCGPRGFYGTIDVHLDCET 163
Query: 154 LVARFVGKPAAILFGMGYVTNSAIIPALVGKGGLIISDSLNHNSIVNGARGSGATVRVFQ 213
+A+F+G +IL+ G T ++IPA KG +I++D H ++ NG + S +TV F+
Sbjct: 164 KIAKFLGTQDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLQLSRSTVVYFK 223
Query: 214 HNNPAHLEEVLREQIAGGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEVIAVCKKYKAYT 273
HN+ A L L E++ G RT + + I+V E IY G++ L E++ + +KY+
Sbjct: 224 HNDMASLASTL-EKLTHGNKRTEKIRRYIVV--EAIYQNSGQIAPLDEIVRLKEKYRFRV 280
Query: 274 YLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCGGYIAASKEIIDHLKHI 333
L+E+HS G +GK+GRG+ E GV +DI+ + + GG+ S ++DH +
Sbjct: 281 ILEESHSFGVLGKSGRGLAEHYGVPIEKIDIITAGMGNALATDGGFCTGSIRVVDHQRLS 340
Query: 334 CPAHIYATSMSPPAVQQVISAIKVILGEDGSNRGAKKLAQIRENSNFFRSELQKM-GFEV 392
++++ S+ P ISA+ D LA +R N EL + G E+
Sbjct: 341 SSGYVFSASLPPYLASAAISAV------DHLEENPSVLANLRSNITLLHKELSDVQGLEI 394
Query: 393 LGDNDSPVMPIMLYNPAK--------IPAFSRECLRQHXXXXXXXXXXXX---LLLARAR 441
+ SP++ + L + S + L++ L R
Sbjct: 395 ASNILSPIVFLKLKTSTGSAVADLELLEVISEKVLKEDSVFIAATKRSSLDKCRLPVGIR 454
Query: 442 ICISASHSREDLIKGLEVISKVG 464
+ +SA H+ D++K E + +V
Sbjct: 455 LFVSAGHTESDILKVSESLKRVA 477
>Os10g0189600 Aminotransferase, class I and II domain containing protein
Length = 482
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 158/316 (50%), Gaps = 11/316 (3%)
Query: 94 HRTTKTSKCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSVRVDGGNTKLHVELEE 153
H T + +N S NYLG +E + S++KY +C R G +H++ E
Sbjct: 106 HTTVDGKEVVNFASANYLGLIG-NEKIIDSCVGSVEKYGVGSCGPRSFYGTIDVHLDCES 164
Query: 154 LVARFVGKPAAILFGMGYVTNSAIIPALVGKGGLIISDSLNHNSIVNGARGSGATVRVFQ 213
+A F+G +IL+ G T ++IPA KG +I++D H ++ NG + S +TV F+
Sbjct: 165 KIANFLGTQDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLQLSRSTVVYFK 224
Query: 214 HNNPAHLEEVLREQIAGGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEVIAVCKKYKAYT 273
HN+ A L +L E++ G T + + I+V E IY G++ L E++ + +KY+
Sbjct: 225 HNDMASLASIL-EKLTHGNKHTEKIRRYIVV--EAIYQNSGQIAPLDEIVRLKEKYRFRV 281
Query: 274 YLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCGGYIAASKEIIDHLKHI 333
L+E+HS G +GK+GRG+ E GV +DI+ + + GG+ S ++DH +
Sbjct: 282 ILEESHSFGVLGKSGRGLAEHYGVPVEKIDIITAGMGNALATDGGFCTGSVRVVDHQRLS 341
Query: 334 CPAHIYATSMSPPAVQQVISAIKVILGEDGSNRGAKKLAQIRENSNFFRSELQKM-GFEV 392
++++ S+ P +SA+ + LA +R N EL + G E+
Sbjct: 342 SSGYVFSASLPPYLASAAMSAVNHL------EENPSVLANLRSNIALLHKELSDIPGLEI 395
Query: 393 LGDNDSPVMPIMLYNP 408
+ SP++ + L P
Sbjct: 396 ASNILSPIVFLKLKTP 411
>Os01g0928600 Similar to Serine palmitoyltransferase (Fragment)
Length = 115
Score = 115 bits (287), Expect = 1e-25, Method: Composition-based stats.
Identities = 49/56 (87%), Positives = 55/56 (98%)
Query: 367 GAKKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQH 422
GAKK+AQIR+NSNFFRSELQKMGFEVLGDNDSPVMP M+YNPAK+PAFSRECL+Q+
Sbjct: 2 GAKKIAQIRDNSNFFRSELQKMGFEVLGDNDSPVMPFMVYNPAKMPAFSRECLKQN 57
>Os01g0736400 Aminotransferase, class I and II domain containing protein
Length = 362
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 160/358 (44%), Gaps = 50/358 (13%)
Query: 143 GNTKLHVELEELVARFVGKPAAILFGMGYVTNSAIIPAL--------------VGKGGLI 188
G T H +EE +A K +L G+ N A++ AL G+ +
Sbjct: 32 GYTTYHKLVEESLAELKKKEDCLLCPTGFSANMAVMTALGSVSSILSVGRKPAEGERIAV 91
Query: 189 ISDSLNHNSIVNG----ARGSGATVRVFQHNNPAHLEEVLREQIAGGQPRTHRPWKKIIV 244
SD+LNH SI++G R V++H + HL+ +L + +K +V
Sbjct: 92 FSDALNHASIIDGIRLVERQQEVVAFVYKHCDMHHLDFLL----------SSCSIEKKVV 141
Query: 245 IVEGIYSMEGELCKLPEVIAVCKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDPADVDI 304
+ + ++SM+G+ LPE++ + +KY +D+AH G+ G G EL G + D+DI
Sbjct: 142 VTDSLFSMDGDFAPLPELVKLRRKYGFLLVIDDAHGTLVCGENGGGAPELFGCE-NDIDI 200
Query: 305 MMGTFTKSFGSCGGYIAASKEIIDHLKHICPAHIYATSMSPPAVQQVISAIKVILGEDGS 364
+GT +K+ G GG+I S ++ + I++T++ P V V +A+ V S
Sbjct: 201 SVGTLSKAAGCQGGFIVCSNRWKRLIQSRGRSFIFSTALPVPVVASVYAALHV------S 254
Query: 365 NRGAKKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQHXX 424
+ + + I + +F S L K+ D SP++ I++ + R LR
Sbjct: 255 KKERWRRSVIWRHVQYFAS-LTKL------DLTSPIISIVVGSEEAALRAGRHMLRSGFH 307
Query: 425 XXXXXXXXXXLLLARARICISASHSREDLIKGLEVISKVGDLVGIKYFPVEHEKTASV 482
R RI +SASHS +D+ + ++ +S + P +H++ V
Sbjct: 308 VTPIRPPTVPQNSCRLRITLSASHSLDDIKRLVDALS--------PWLPDKHDEQTYV 357
>Os10g0560900 Aminotransferase, class I and II domain containing protein
Length = 450
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 152/337 (45%), Gaps = 42/337 (12%)
Query: 143 GNTKLHVELEELVARFVGKPAAILFGMGYVTNSAIIPALVGKGGL--------------I 188
G T H +EE +A K +L G+ N A++ AL L I
Sbjct: 120 GYTTYHKMVEESLAELKKKEDCLLCPTGFSANMAVMTALGNISSLLAAGRKPAEDERIAI 179
Query: 189 ISDSLNHNSIVNG----ARGSGATVRVFQHNNPAHLEEVLREQIAGGQPRTHRPWKKIIV 244
SD+LNH SI++G R V++H + +HLE +L + +K +V
Sbjct: 180 FSDALNHASIIDGIRLVERQQEVVSFVYKHCDMSHLELLL----------SSCSMEKKVV 229
Query: 245 IVEGIYSMEGELCKLPEVIAVCKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDPADVDI 304
+ + ++SM+G+ LPE++ + +KY +D+AH G+ G G EL + ++DI
Sbjct: 230 VTDSLFSMDGDFAPLPELVKLRRKYGFLLVIDDAHGTLVCGENGGGAPELFECE-NEIDI 288
Query: 305 MMGTFTKSFGSCGGYIAASKEIIDHLKHICPAHIYATSMSPPAVQQVISAIKVILGEDGS 364
+GT +K+ G GG+IA S ++ + I++T++ P V V +A+ V S
Sbjct: 289 SVGTLSKAAGCQGGFIACSTRWKRLIQSRGRSFIFSTALPVPVVASVYAALYV------S 342
Query: 365 NRGAKKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQHXX 424
+ + I + +F S L K+ SP++ I++ + R+ LR
Sbjct: 343 REERWRRSVIWRHVQYFAS-LTKLNIT------SPIISIVVGSEKAALRAGRDMLRSGFH 395
Query: 425 XXXXXXXXXXLLLARARICISASHSREDLIKGLEVIS 461
R RI +SASHS +D+ + ++ ++
Sbjct: 396 VTPIRPPTVPPNSCRLRITLSASHSSDDIKRLVDALT 432
>AK107303
Length = 477
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 146/315 (46%), Gaps = 27/315 (8%)
Query: 103 LNLGSYNYLGFAAADEY--CTPRVIESLKKYSASTCSV--RVDGGNTKLHVELEELVAR- 157
++ S +YL A + + +I S SA S R+ GN+ H +E+ + R
Sbjct: 43 VDFSSNDYLSLATSSRVRADSAAIIASDSPLSAQLGSAGSRLLDGNSSAHEAIEDDLTRH 102
Query: 158 FVGKPAAILFGMGYVTNSAIIPALVGKGGLIISDSLNHNSIVNGARGS--GATVRV-FQH 214
F A +LF GY N +++ L ++I D L H S+ +G R S A +R+ F+H
Sbjct: 103 FASSEAGLLFNSGYEANVSLLSTLPQPKDVVIYDELVHASVHDGLRRSRVPAHLRIPFRH 162
Query: 215 NNPAHLEEVLRE-----QIAGGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEVIAVCK-- 267
N+ HL ++L + G + + + VE IYSM+G+ C L ++
Sbjct: 163 NSVDHLRDILSRLRQDGTLTAGTSAAPGEQRNVWLAVESIYSMDGDACPLRALLDTLSQH 222
Query: 268 --KYKAYTYLDEAHSIGAVGKTGRGVCELLGV-DPADVDIMMGTFTKSFGSCGGYIAASK 324
+++ +DEAHS G GRG+ LG+ D + + TF K++G+ G + SK
Sbjct: 223 VPQHRICAVVDEAHSTAVYGSRGRGLVNALGLQDDPRITARLMTFGKAWGASGAIVLCSK 282
Query: 325 EIIDHLKHICPAHIYATSMSPPAVQQVISAIKVILGEDGSNRGAKKLAQIRENSNFFRSE 384
+L + I++T++ P + +++A + + +DGS A+ R + F +
Sbjct: 283 IARHYLINYARPLIFSTALGYPQLASILAAFRSV--QDGS-------AEKRARATFGNAR 333
Query: 385 LQKMGFEVLGDNDSP 399
G E + + SP
Sbjct: 334 RLVDGLEGVIRSQSP 348
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.138 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,535,345
Number of extensions: 714084
Number of successful extensions: 1685
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 1671
Number of HSP's successfully gapped: 10
Length of query: 489
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 384
Effective length of database: 11,553,331
Effective search space: 4436479104
Effective search space used: 4436479104
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)