Os01g0736400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Aminotransferase, class I and II domain containing protein.
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Os01g0736400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Aminotransferase, class I and II domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 127.31 | 0.53 | 5.93 | -0.318 | 1.43 | -1.01 | 0.643 | 0.345 | -0.371 | 21.4 | 28.89 | 279 | 7.38 | 17.7 |
| 127.62 | 0.526 | 5.93 | -0.27 | 1.43 | -1.01 | 0.683 | -- | -0.378 | 21.4 | 28.8 | 280 | 7.33 | 17.8 |
| 128.54 | 0.528 | 5.93 | -0.34 | 1.42 | -1.02 | -- | 0.542 | -0.373 | 21.4 | 28.77 | 283 | 7.3 | 17.8 |
| 129.62 | 0.53 | 5.92 | -0.322 | 1.41 | -1.02 | -- | -- | -0.362 | 21.4 | 28.7 | 290 | 7.17 | 17.9 |
| 217.82 | 0.687 | 5.93 | -0.152 | -- | -1.1 | -- | -0.0319 | -0.364 | -- | 28.7 | 1164 | 7.27 | 19.3 |
| 185.53 | 0.639 | 5.87 | -0.0293 | 1.01 | -- | 0.988 | -- | -0.193 | 21.9 | -- | -- | -- | -- |
| 189.3 | 0.644 | 5.87 | -0.0675 | 1.01 | -- | -- | -- | -0.196 | 21.9 | -- | -- | -- | -- |
| 193.21 | 0.647 | 5.92 | -0.314 | -- | -1.46 | -- | -- | -0.351 | -- | 28.81 | 696 | 4.11 | 24 |
| 131.6 | 0.534 | 5.92 | -- | 1.41 | -1 | -- | -- | -0.351 | 21.4 | 28.7 | 294 | 7.1 | 18 |
| 249.89 | 0.739 | 5.84 | -0.0563 | -- | -- | -- | -- | -0.196 | -- | -- | -- | -- | -- |
| 189.42 | 0.644 | 5.87 | -- | 1.01 | -- | -- | -- | -0.188 | 21.9 | -- | -- | -- | -- |
| 194.38 | 0.649 | 5.86 | -- | -- | -1.39 | -- | -- | -0.251 | -- | 29.09 | 679 | 4.31 | 24 |
| 249.97 | 0.738 | 5.84 | -- | -- | -- | -- | -- | -0.189 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 137.22 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 2 | 138.41 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 7 | 139.35 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 15 |
| 31 | 143.17 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 12 | 10 |
| 52 | 144.51 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 10 | 10 |
| 66 | 145.70 | temperature | 30.0 | 270 | < th | dose independent | rect. | 14 | 22 |
| 71 | 145.89 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 12 | 21 |
| 73 | 145.96 | humidity | 70.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 96 | 146.87 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 10 | 10 |
| 107 | 147.00 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 12 | 9 |
| 123 | 147.23 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 138 | 147.45 | temperature | 25.0 | 270 | > th | dose dependent | sin | 22 | NA |
| 141 | 147.51 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 19 |
| 148 | 147.63 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 10 |
| 160 | 147.83 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 12 | 21 |
| 191 | 148.16 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 197 | 148.23 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 273 | 149.17 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 10 | 22 |
| 274 | 149.18 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 285 | 149.27 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 320 | 149.87 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 332 | 150.00 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 7 | 18 |
| 351 | 150.13 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 2 |
| 367 | 150.31 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 16 | 16 |
| 388 | 150.58 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 394 | 150.62 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 3 | 11 |
| 398 | 150.64 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 12 | 23 |
| 411 | 150.74 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 16 |
| 419 | 150.82 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 12 |
| 437 | 151.03 | temperature | 30.0 | 720 | < th | dose independent | rect. | 22 | 14 |
| 438 | 151.04 | wind | 9.0 | 270 | < th | dose independent | rect. | 10 | 22 |
| 466 | 151.22 | temperature | 25.0 | 270 | > th | dose dependent | no | NA | NA |
| 470 | 151.24 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 474 | 151.26 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 506 | 151.39 | wind | 9.0 | 90 | < th | dose independent | rect. | 12 | 9 |
| 515 | 151.42 | wind | 7.0 | 30 | < th | dose independent | rect. | 12 | 21 |
| 517 | 151.43 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 540 | 151.54 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 9 | 18 |
| 555 | 151.61 | radiation | 30.0 | 1440 | > th | dose independent | rect. | 15 | 18 |
| 557 | 151.62 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 19 |
| 605 | 151.93 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 12 | 9 |
| 606 | 151.93 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 12 | 9 |
| 612 | 151.96 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 620 | 152.06 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 19 |
| 622 | 152.06 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 19 |
| 640 | 152.24 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 643 | 152.24 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 645 | 152.24 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 21 |
| 661 | 152.33 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 671 | 152.38 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 15 | 18 |
| 675 | 152.41 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 23 | 8 |
| 679 | 152.43 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 15 |
| 683 | 152.48 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 12 | 9 |
| 700 | 152.55 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 8 | 2 |
| 706 | 152.57 | temperature | 10.0 | 90 | > th | dose independent | rect. | 12 | 9 |
| 709 | 152.57 | temperature | 10.0 | 90 | > th | dose independent | rect. | 21 | 15 |
| 710 | 152.57 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 21 | 15 |
| 722 | 152.64 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 16 | 10 |
| 728 | 152.71 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 3 |
| 730 | 152.71 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 9 | 3 |
| 731 | 152.71 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 9 | 3 |
| 732 | 152.71 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 3 |
| 733 | 152.71 | temperature | 10.0 | 30 | > th | dose independent | rect. | 12 | 21 |
| 734 | 152.71 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 3 |
| 736 | 152.72 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 737 | 152.73 | radiation | 1.0 | 30 | > th | dose independent | rect. | 9 | 3 |
| 741 | 152.74 | humidity | 70.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 743 | 152.75 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 744 | 152.75 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 745 | 152.75 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 746 | 152.75 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 19 |
| 753 | 152.78 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 21 |
| 756 | 152.78 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 21 |
| 758 | 152.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 5 |
| 759 | 152.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 5 |
| 770 | 152.86 | wind | 1.0 | 30 | > th | dose independent | rect. | 9 | 3 |
| 776 | 152.89 | temperature | 30.0 | 270 | < th | dose independent | no | NA | NA |
| 789 | 152.93 | wind | 1.0 | 90 | > th | dose independent | rect. | 12 | 9 |
| 792 | 152.94 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 797 | 152.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 22 |
| 800 | 152.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 813 | 153.03 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 12 | 23 |
| 823 | 153.07 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 21 | 15 |
| 824 | 153.07 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 21 | 15 |
| 826 | 153.08 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 827 | 153.08 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 829 | 153.08 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 830 | 153.08 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 832 | 153.08 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 833 | 153.08 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 835 | 153.08 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 839 | 153.10 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 6 |
| 841 | 153.10 | temperature | 20.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 842 | 153.10 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 846 | 153.11 | wind | 7.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 849 | 153.12 | temperature | 30.0 | 270 | > th | dose independent | rect. | 12 | 23 |
| 869 | 153.22 | radiation | 40.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 883 | 153.27 | temperature | 30.0 | 270 | > th | dose independent | rect. | 10 | 23 |
| 888 | 153.28 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 3 |
| 896 | 153.32 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 904 | 153.35 | temperature | 30.0 | 270 | > th | dose independent | sin | 21 | NA |
| 911 | 153.37 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 921 | 153.40 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 933 | 153.44 | wind | 9.0 | 90 | < th | dose independent | rect. | 21 | 15 |
| 938 | 153.46 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 2 |
| 939 | 153.46 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 8 | 2 |
| 940 | 153.46 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 8 | 2 |
| 942 | 153.46 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 22 |
| 949 | 153.49 | temperature | 30.0 | 270 | > th | dose independent | no | NA | NA |
| 952 | 153.49 | temperature | 30.0 | 270 | > th | dose independent | rect. | 9 | 10 |