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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0928600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Serine palmitoyltransferase (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.87 (0.0172) R2 : 0.00338
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0449 (0.0361) R2dN8 : 0.00437 R2N8 : 0.00338
σ : 0.323
deviance : 47.89
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
45.27 0.316 2.91 -0.476 0.0224 1.3 -0.147 -9.6 0.0392 0.0912 30.12 6 -- --
46.84 0.319 2.88 -0.167 0.0209 0.198 -0.117 -- 0.0349 23.4 29.7 5 -- --
45.35 0.314 2.91 -0.474 0.026 1.35 -- -9.93 0.0399 22.6 30.2 5 -- --
46.89 0.319 2.88 -0.163 0.0234 0.194 -- -- 0.0351 21.6 29.7 5 -- --
45.39 0.314 2.91 -0.466 -- 1.32 -- -9.72 0.0399 -- 30.2 5 -- --
47.17 0.322 2.88 -0.154 0.0196 -- 0.17 -- 0.0276 15.2 -- -- -- --
47.22 0.322 2.88 -0.151 0.0347 -- -- -- 0.0288 18.4 -- -- -- --
46.93 0.319 2.88 -0.162 -- 0.193 -- -- 0.0353 -- 29.7 5 -- --
47.58 0.321 2.87 -- 0.0251 0.169 -- -- 0.0525 20.3 29.82 5 -- --
47.29 0.321 2.88 -0.152 -- -- -- -- 0.0281 -- -- -- -- --
47.82 0.323 2.87 -- 0.0367 -- -- -- 0.0456 18.2 -- -- -- --
47.61 0.321 2.87 -- -- 0.173 -- -- 0.0525 -- 29.86 5 -- --
47.89 0.323 2.87 -- -- -- -- -- 0.0449 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 39.78 temperature 15.0 30 > th dose dependent rect. 20 1
2 39.78 radiation 30.0 4320 < th dose dependent rect. 21 1
12 39.80 temperature 20.0 30 > th dose independent rect. 20 1
13 39.80 humidity 80.0 30 > th dose independent rect. 20 1
15 39.82 wind 5.0 30 < th dose independent rect. 20 1
21 39.84 wind 1.0 30 > th dose independent rect. 20 1
24 39.84 temperature 10.0 30 > th dose independent rect. 20 1
26 39.84 temperature 10.0 1440 > th dose independent rect. 21 1
29 39.84 temperature 30.0 30 < th dose independent rect. 20 1
30 39.84 temperature 30.0 1440 < th dose independent rect. 21 1
34 39.84 humidity 50.0 30 > th dose independent rect. 20 1
37 39.84 humidity 50.0 1440 > th dose independent rect. 21 1
43 39.84 atmosphere 995.0 30 > th dose independent rect. 20 1
44 39.84 atmosphere 995.0 1440 > th dose independent rect. 21 1
45 39.84 atmosphere 1010.0 30 < th dose independent rect. 20 1
47 39.84 radiation 1.0 30 < th dose independent rect. 20 1
52 39.84 radiation 1.0 1440 < th dose independent rect. 21 1
72 39.84 precipitation 0.1 30 < th dose independent rect. 20 1
73 39.84 temperature 10.0 30 > th dose independent rect. 21 23
74 39.84 temperature 10.0 1440 > th dose independent rect. 22 23
77 39.84 humidity 50.0 30 > th dose dependent rect. 20 1
78 39.84 atmosphere 995.0 30 > th dose dependent rect. 20 1
79 39.84 radiation 1.0 30 < th dose dependent rect. 20 1
85 39.84 precipitation 0.1 30 < th dose dependent rect. 20 1
90 39.86 wind 9.0 30 < th dose dependent rect. 20 1
92 39.87 humidity 90.0 30 < th dose independent rect. 20 1
96 39.91 wind 1.0 30 > th dose dependent rect. 20 1
98 39.93 atmosphere 1015.0 30 < th dose dependent rect. 20 1
106 40.12 humidity 90.0 30 < th dose dependent rect. 20 1
114 40.36 temperature 30.0 30 < th dose dependent rect. 20 1
115 40.37 temperature 25.0 30 > th dose dependent rect. 20 3
149 40.70 wind 9.0 30 < th dose independent rect. 21 23
155 40.79 temperature 25.0 30 > th dose dependent rect. 20 9
170 41.24 temperature 25.0 30 > th dose independent rect. 20 3
193 42.03 temperature 30.0 30 < th dose independent rect. 21 23
194 42.09 precipitation 0.1 30 < th dose independent rect. 21 23
196 42.09 precipitation 0.1 30 < th dose dependent rect. 21 23
201 42.16 atmosphere 995.0 30 > th dose independent rect. 21 23
220 42.41 temperature 30.0 10 > th dose dependent rect. 11 1
223 42.48 atmosphere 1005.0 10 > th dose dependent rect. 20 3
238 42.59 temperature 30.0 90 > th dose dependent rect. 10 2
391 43.45 atmosphere 1015.0 30 < th dose independent rect. 21 23
395 43.48 temperature 30.0 10 > th dose dependent sin 7 NA
398 43.51 temperature 30.0 90 > th dose independent rect. 10 2
400 43.57 atmosphere 995.0 10 > th dose independent rect. 12 8
430 43.77 wind 1.0 270 > th dose independent rect. 7 14
445 43.84 humidity 50.0 30 > th dose independent rect. 21 23
461 43.96 atmosphere 1015.0 270 < th dose independent rect. 21 10
466 43.98 precipitation 0.1 270 < th dose independent rect. 21 10
468 43.98 precipitation 0.1 270 < th dose dependent rect. 21 10
469 43.99 temperature 10.0 270 > th dose independent rect. 21 10
470 43.99 temperature 30.0 270 < th dose independent rect. 21 10
471 43.99 humidity 50.0 270 > th dose independent rect. 21 10
473 43.99 atmosphere 995.0 270 > th dose independent rect. 21 10
474 43.99 radiation 30.0 270 < th dose independent rect. 21 10
476 43.99 temperature 10.0 270 > th dose independent rect. 7 14
477 43.99 precipitation 0.1 270 < th dose independent rect. 7 14
480 43.99 atmosphere 995.0 30 > th dose dependent rect. 12 8
481 43.99 precipitation 0.1 270 < th dose dependent rect. 7 14
488 44.00 wind 9.0 270 < th dose independent rect. 21 10
502 44.03 temperature 30.0 10 > th dose independent rect. 11 1
509 44.04 atmosphere 1010.0 10 < th dose independent rect. 12 8
527 44.09 temperature 25.0 270 > th dose dependent rect. 18 15
534 44.11 temperature 10.0 10 > th dose independent rect. 12 8
537 44.11 temperature 10.0 10 > th dose independent rect. 20 16
538 44.11 atmosphere 995.0 10 > th dose independent rect. 20 16
542 44.12 wind 1.0 10 > th dose independent rect. 12 8
543 44.12 precipitation 0.1 10 < th dose independent rect. 12 8
545 44.12 precipitation 0.1 10 < th dose dependent rect. 12 8
546 44.13 humidity 90.0 30 < th dose independent rect. 20 3
556 44.16 precipitation 0.1 1440 < th dose independent rect. 21 1
561 44.16 precipitation 0.1 1440 < th dose dependent rect. 21 1
580 44.17 wind 9.0 10 < th dose independent rect. 12 8
583 44.18 humidity 50.0 270 > th dose independent rect. 7 14
584 44.18 precipitation 0.1 10 < th dose independent rect. 20 16
585 44.18 precipitation 0.1 10 < th dose dependent rect. 20 16
590 44.19 atmosphere 1015.0 30 < th dose independent rect. 23 10
591 44.19 wind 9.0 270 < th dose independent rect. 7 14
607 44.21 humidity 50.0 10 > th dose independent rect. 20 16
622 44.23 temperature 10.0 1440 > th dose independent rect. 13 8
626 44.23 temperature 10.0 1440 > th dose independent rect. 21 16
629 44.23 atmosphere 995.0 1440 > th dose independent rect. 21 16
636 44.24 atmosphere 995.0 10 > th dose independent rect. 12 21
643 44.25 wind 9.0 30 < th dose independent rect. 20 16
651 44.26 radiation 40.0 270 < th dose dependent rect. 21 10
654 44.28 atmosphere 1005.0 30 > th dose independent rect. 20 3
659 44.31 humidity 80.0 90 > th dose independent rect. 19 4
660 44.31 temperature 10.0 30 > th dose dependent rect. 23 10
666 44.32 temperature 10.0 10 > th dose dependent rect. 12 8
680 44.33 atmosphere 995.0 270 > th dose independent rect. 10 21
690 44.35 wind 1.0 30 > th dose independent rect. 20 16
701 44.37 atmosphere 995.0 270 > th dose independent rect. 10 23
706 44.39 wind 3.0 90 > th dose independent rect. 9 2
709 44.39 humidity 80.0 90 > th dose independent rect. 8 15
713 44.40 atmosphere 1015.0 270 < th dose independent rect. 7 14
719 44.43 humidity 50.0 10 > th dose independent rect. 12 8
748 44.45 atmosphere 995.0 10 > th dose dependent rect. 20 16
749 44.46 wind 1.0 90 > th dose independent rect. 9 14
751 44.46 atmosphere 995.0 30 > th dose dependent rect. 9 14
753 44.47 humidity 90.0 10 < th dose independent rect. 12 8
755 44.47 atmosphere 1015.0 10 < th dose independent rect. 12 21
844 44.55 atmosphere 995.0 270 > th dose independent rect. 7 14
846 44.55 wind 1.0 90 > th dose dependent rect. 9 2
875 44.57 precipitation 0.1 90 < th dose independent rect. 23 10
878 44.57 precipitation 0.1 90 < th dose dependent rect. 23 10
879 44.58 wind 7.0 90 < th dose independent rect. 23 10
881 44.58 temperature 10.0 90 > th dose independent rect. 23 10
882 44.58 humidity 50.0 90 > th dose independent rect. 23 10
883 44.58 atmosphere 995.0 90 > th dose independent rect. 23 10
884 44.58 wind 1.0 10 > th dose independent rect. 9 14
886 44.58 temperature 10.0 90 > th dose independent rect. 9 14
887 44.58 precipitation 0.1 90 < th dose independent rect. 9 14
890 44.58 precipitation 0.1 90 < th dose dependent rect. 9 14
894 44.59 wind 9.0 90 < th dose dependent rect. 23 10
899 44.60 wind 1.0 10 > th dose dependent rect. 9 3
901 44.61 wind 1.0 10 > th dose independent rect. 9 3
903 44.61 atmosphere 995.0 30 > th dose independent rect. 23 23
905 44.62 temperature 30.0 90 < th dose independent rect. 23 10
911 44.63 radiation 40.0 90 < th dose independent rect. 23 9
929 44.64 temperature 30.0 30 < th dose independent rect. 23 21
950 44.67 radiation 1.0 10 > th dose independent rect. 9 3
953 44.67 humidity 50.0 1440 > th dose independent rect. 24 10
957 44.67 wind 1.0 10 > th dose dependent rect. 20 16
960 44.68 temperature 10.0 1440 > th dose independent rect. 24 10
963 44.68 atmosphere 995.0 1440 > th dose independent rect. 24 10
964 44.68 temperature 10.0 1440 > th dose independent rect. 10 14
969 44.69 atmosphere 1000.0 10 > th dose independent rect. 9 3
975 44.69 precipitation 0.1 10 < th dose independent rect. 12 21
984 44.69 precipitation 0.1 10 < th dose dependent rect. 12 21
985 44.70 temperature 10.0 10 > th dose independent rect. 9 3
989 44.70 temperature 10.0 1440 > th dose independent rect. 10 3
994 44.70 atmosphere 995.0 1440 > th dose independent rect. 10 3
995 44.70 atmosphere 1015.0 10 < th dose independent rect. 9 3
997 44.70 precipitation 0.1 10 < th dose independent rect. 9 3