BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0282800 Os11g0282800|J090045D02
(283 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0282800 TGF-beta receptor, type I/II extracellular reg... 380 e-106
Os11g0283500 TGF-beta receptor, type I/II extracellular reg... 234 8e-62
Os12g0231000 TGF-beta receptor, type I/II extracellular reg... 182 2e-46
Os04g0491500 TGF-beta receptor, type I/II extracellular reg... 148 4e-36
Os04g0491200 TGF-beta receptor, type I/II extracellular reg... 97 1e-20
Os11g0284300 87 2e-17
Os11g0284200 79 4e-15
Os03g0719900 Similar to Peptide transporter 1 78 7e-15
Os07g0100600 Similar to Peptide transporter 78 9e-15
Os01g0142800 Similar to Peptide transporter 70 1e-12
Os03g0235300 Similar to LeOPT1 67 1e-11
Os06g0264500 TGF-beta receptor, type I/II extracellular reg... 65 8e-11
>Os11g0282800 TGF-beta receptor, type I/II extracellular region family protein
Length = 283
Score = 380 bits (977), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/283 (69%), Positives = 197/283 (69%)
Query: 1 MGSSSGLVDWRGRPVDTWKHGGVRASIYIHMLVWLSNVSNIGNMTNIVSYLSVKMNMGVX 60
MGSSSGLVDWRGRPVDTWKHGGVRASIYIHMLVWLSNVSNIGNMTNIVSYLSVKMNMGV
Sbjct: 1 MGSSSGLVDWRGRPVDTWKHGGVRASIYIHMLVWLSNVSNIGNMTNIVSYLSVKMNMGVA 60
Query: 61 XXXXXXXXFVAMMQVFTIPAAFLADSYLKRVYTVLFFAPIEILHLIKIHFEAWLSPSLQG 120
FVAMMQVFTIPAAFLADSYLKRVYTVLFFAPIEILHLIKIHFEAWLSPSLQG
Sbjct: 61 AASTTSASFVAMMQVFTIPAAFLADSYLKRVYTVLFFAPIEILHLIKIHFEAWLSPSLQG 120
Query: 121 YILLAIQAHVPSLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHGSNXXXXXXXXXX 180
YILLAIQAHVPSLH VHGSN
Sbjct: 121 YILLAIQAHVPSLHPAPCELAGAAAGAGAGATAATTEAAPGTCETVHGSNLSLLMLGLYL 180
Query: 181 ICVGEGAVRACLPALGGDQFDEGDAAEQRQAASFFNWYAFXXXXXXXXXXXXXXXXQDNK 240
ICVGEGAVRACLPALGGDQFDEGDAAEQRQAASFFNWYAF QDNK
Sbjct: 181 ICVGEGAVRACLPALGGDQFDEGDAAEQRQAASFFNWYAFAVSLGALVGLVAVVWVQDNK 240
Query: 241 GWDXXXXXXXXXXXXXXXXXXXXMPTYRNKVPAGSPITRILQV 283
GWD MPTYRNKVPAGSPITRILQV
Sbjct: 241 GWDAGFAVCGAVVLLGLLVWAAGMPTYRNKVPAGSPITRILQV 283
>Os11g0283500 TGF-beta receptor, type I/II extracellular region family protein
Length = 583
Score = 234 bits (596), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 131/283 (46%), Positives = 152/283 (53%), Gaps = 28/283 (9%)
Query: 1 MGSSSGLVDWRGRPVDTWKHGGVRASIYIHMLVWLSNVSNIGNMTNIVSYLSVKMNMGVX 60
MGSSSGLVDWRGRPVDT KHGGVRASI+IH +V L+N NI NM N+VSYL M+MGV
Sbjct: 1 MGSSSGLVDWRGRPVDTKKHGGVRASIFIHAMVLLTNAPNIANMMNMVSYLRGTMHMGVA 60
Query: 61 XXXXXXXXFVAMMQVFTIPAAFLADSYLKRVYTVLFFAPIEILHLIKIHFEAWLSPSLQG 120
+ A +Q+F+IPAAFLADSYLKR YTVL FAPIEI+ G
Sbjct: 61 QASTTASNYFAALQMFSIPAAFLADSYLKRFYTVLLFAPIEII----------------G 104
Query: 121 YILLAIQAHVPSLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHGSNXXXXXXXXXX 180
YILLA+QA+ SLH V G+N
Sbjct: 105 YILLAVQAYTTSLH------------PPPCSPAATAASATTTCEPVRGANLSLLLLGLYL 152
Query: 181 ICVGEGAVRACLPALGGDQFDEGDAAEQRQAASFFNWYAFXXXXXXXXXXXXXXXXQDNK 240
I +G+GA RACLPALGGDQFD GD EQRQ SF+NWY F Q++K
Sbjct: 153 IPIGDGAARACLPALGGDQFDLGDPDEQRQETSFYNWYTFAVSTGGFVGLVFIVWVQNSK 212
Query: 241 GWDXXXXXXXXXXXXXXXXXXXXMPTYRNKVPAGSPITRILQV 283
GW P YRN++P GSPITR+LQV
Sbjct: 213 GWGVGFAVSAAFVALGLLVWAAAFPLYRNQLPMGSPITRVLQV 255
>Os12g0231000 TGF-beta receptor, type I/II extracellular region family protein
Length = 583
Score = 182 bits (462), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 139/288 (48%), Gaps = 44/288 (15%)
Query: 6 GLVDWRGRPVDTWKHGGVRASIYIHMLVWLSNVSNIGNMTNIVSYLSVKMNMGVXXXXXX 65
GLVDWRGRPVD +HGG++A ++I++L+ ++N+ NI M NIVSYL M+MG+
Sbjct: 7 GLVDWRGRPVDPRRHGGLKAVMFIYVLIVMTNMGNIPTMLNIVSYLHGTMHMGIADASTT 66
Query: 66 XXXFVAMMQVFTIPAAFLADSYLKRVYTVLFFAPIEILHLIKIHFEAWLSPSLQGYILLA 125
F + VF+ AF++DSY+KR YT+L FAPIEIL GY+LLA
Sbjct: 67 AANFYGAICVFSFLGAFISDSYIKRFYTILIFAPIEIL----------------GYMLLA 110
Query: 126 IQAHVPSLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHGSNXXXXXXXXXXICVGE 185
QAH PSLH V G N I +GE
Sbjct: 111 CQAHFPSLH------------------PPPCDAAAGQCAAVSGRNLSLLRLGLYVIPLGE 152
Query: 186 GAVRACLPALGGDQFDEGDAAEQ----------RQAASFFNWYAFXXXXXXXXXXXXXXX 235
GA+R C ALGGDQFD G+ R ASFFNW+AF
Sbjct: 153 GALRVCGAALGGDQFDGGEVGGDDPAAAAAAEARGKASFFNWFAFCISLGGLVGLVLVVW 212
Query: 236 XQDNKGWDXXXXXXXXXXXXXXXXXXXXMPTYRNKVPAGSPITRILQV 283
Q+N+GWD +P YR++VP GSP+TRILQV
Sbjct: 213 VQNNEGWDLGFALAALMALVAMAVVLAGLPFYRHRVPTGSPLTRILQV 260
>Os04g0491500 TGF-beta receptor, type I/II extracellular region family protein
Length = 557
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 126/278 (45%), Gaps = 32/278 (11%)
Query: 6 GLVDWRGRPVDTWKHGGVRASIYIHMLVWLSNVSNIGNMTNIVSYLSVKMNMGVXXXXXX 65
G VDWRG P+D HGGVRA+ ++ L ++N+ NI NM N+V+YL M+MGV
Sbjct: 5 GFVDWRGNPIDRKVHGGVRAAWFMFFLSVVTNMENIPNMLNLVTYLHGTMHMGVSSSATT 64
Query: 66 XXXFVAMMQVFTIPAAFLADSYLKRVYTVLFFAPIEILHLIKIHFEAWLSPSLQGYILLA 125
F+ F + AFL+DSY+ R T+L F P+E L L + A
Sbjct: 65 VTNFIGATSGFALLGAFLSDSYITRSRTILLFGPLEFLALGLL----------------A 108
Query: 126 IQAHVPSLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHGSNXXXXXXXXXXICVGE 185
+QA++PSLH VHG N E
Sbjct: 109 LQAYLPSLH----------------PPPCNIEAELSNCEEVHGFNTVILHIGLYTWAFSE 152
Query: 186 GAVRACLPALGGDQFDEGDAAEQRQAASFFNWYAFXXXXXXXXXXXXXXXXQDNKGWDXX 245
G +RAC P+LG DQFD D +E RQ +SFFNW+ F ++ KGWD
Sbjct: 153 GCIRACTPSLGADQFDHEDPSESRQQSSFFNWFTFGISLGGFIGLILIVWLENYKGWDIG 212
Query: 246 XXXXXXXXXXXXXXXXXXMPTYRNKVPAGSPITRILQV 283
+P YRN+VP GSP+TRILQV
Sbjct: 213 FGVCALLILLGLLIVATGLPFYRNQVPEGSPLTRILQV 250
>Os04g0491200 TGF-beta receptor, type I/II extracellular region family protein
Length = 855
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 79/190 (41%), Gaps = 17/190 (8%)
Query: 95 LFFAPIEILHLIKIHFEAW-LSPSLQGYILLAIQAHVPSLHXXXXXXXXXXXXXXXXXXX 153
L A E++ I F A + +GY LLA+QA++PSL
Sbjct: 360 LLLATFELVAFINYAFWARRYANKKRGYGLLALQAYLPSLRPPPCNAEAEASSCRE---- 415
Query: 154 XXXXXXXXXXXXVHGSNXXXXXXXXXXICVGEGAVRACLPALGGDQFDEGDAAEQRQAAS 213
VHG N G+G +RAC+P LG DQFD D +E RQ +S
Sbjct: 416 ------------VHGRNAVLLYAALYISAFGDGFMRACMPPLGADQFDHEDPSESRQQSS 463
Query: 214 FFNWYAFXXXXXXXXXXXXXXXXQDNKGWDXXXXXXXXXXXXXXXXXXXXMPTYRNKVPA 273
FFNWY F +++KGWD +P YRN VP
Sbjct: 464 FFNWYTFGISFGGFIGLILIVWLENSKGWDVGFGVCAFLILLGLLVVAAGLPLYRNHVPE 523
Query: 274 GSPITRILQV 283
GSP+TRILQV
Sbjct: 524 GSPLTRILQV 533
>Os11g0284300
Length = 437
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 49/96 (51%)
Query: 188 VRACLPALGGDQFDEGDAAEQRQAASFFNWYAFXXXXXXXXXXXXXXXXQDNKGWDXXXX 247
++ACLPALGGDQFD D EQRQ SF+NWY F +++KGW
Sbjct: 1 MKACLPALGGDQFDPADPDEQRQEVSFYNWYTFAASTGGLVGLVFIVWVENSKGWGIGFA 60
Query: 248 XXXXXXXXXXXXXXXXMPTYRNKVPAGSPITRILQV 283
P YRN++P GSPITRILQV
Sbjct: 61 ICAAFVLLGLLVWAAAFPLYRNRLPTGSPITRILQV 96
>Os11g0284200
Length = 80
Score = 79.0 bits (193), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/72 (52%), Positives = 48/72 (66%)
Query: 32 LVWLSNVSNIGNMTNIVSYLSVKMNMGVXXXXXXXXXFVAMMQVFTIPAAFLADSYLKRV 91
+V L+N NI N+ N+VSYL M+MGV A +QVF+IPAA LADSY+KR
Sbjct: 1 MVLLTNAPNIANVLNMVSYLRATMHMGVAEATTTVTNLFAALQVFSIPAALLADSYVKRF 60
Query: 92 YTVLFFAPIEIL 103
YTV+ APIEI+
Sbjct: 61 YTVILLAPIEII 72
>Os03g0719900 Similar to Peptide transporter 1
Length = 593
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 99/281 (35%), Gaps = 36/281 (12%)
Query: 3 SSSGLVDWRGRPVDTWKHGGVRASIYIHMLVWLSNVSNIGNMTNIVSYLSVKMNMGVXXX 62
+ G VD+ G PV + G RA +I ++ G TN+V+YL+ K++ G
Sbjct: 34 TGDGSVDFSGNPVVKERTGRWRACPFILGNECCERLAYYGISTNLVTYLTKKLHDGNASA 93
Query: 63 XXXXXXFVAMMQVFTIPAAFLADSYLKRVYTVLFFAPIEILHLIKIHFEAWLSPSLQGYI 122
+ + + A LAD+Y R +T+ F+ I + G
Sbjct: 94 ASNVTAWQGTCYLTPLIGAILADAYWGRYWTIATFSTIYFI----------------GMA 137
Query: 123 LLAIQAHVPSLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHGSNXXXXXXXXXXIC 182
+L + A VP+ + I
Sbjct: 138 VLTLSASVPTF--------------------MPPPCEGSFCPPANPLQYTVFFLGLYLIA 177
Query: 183 VGEGAVRACLPALGGDQFDEGDAAEQRQAASFFNWYAFXXXXXXXXXXXXXXXXQDNKGW 242
+G G ++ C+ + G DQFD+ D E+ Q SFFNW+ F QDN GW
Sbjct: 178 LGTGGIKPCVSSFGADQFDDTDPVERIQKGSFFNWFYFSINIGALISSSFLVWVQDNIGW 237
Query: 243 DXXXXXXXXXXXXXXXXXXXXMPTYRNKVPAGSPITRILQV 283
YR + P GSPITR+ QV
Sbjct: 238 GIGFGIPTIFMGLAIISFFSGTSLYRFQKPGGSPITRVCQV 278
>Os07g0100600 Similar to Peptide transporter
Length = 582
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 95/281 (33%), Gaps = 34/281 (12%)
Query: 3 SSSGLVDWRGRPVDTWKHGGVRASIYIHMLVWLSNVSNIGNMTNIVSYLSVKMNMGVXXX 62
++ G D G+P K G RA +I ++ G N+V+Y+ ++ G
Sbjct: 15 TTDGTTDHAGKPAVRSKSGTWRACPFILGNECCERLAYYGMSANLVNYMVDRLRQGNAGA 74
Query: 63 XXXXXXFVAMMQVFTIPAAFLADSYLKRVYTVLFFAPIEILHLIKIHFEAWLSPSLQGYI 122
+ V + AFLAD+YL R T+ F + I+ G
Sbjct: 75 AASVNNWSGTCYVMPLVGAFLADAYLGRYRTIAAFMALYIV----------------GLA 118
Query: 123 LLAIQAHVPSLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHGSNXXXXXXXXXXIC 182
LL + A VP + I
Sbjct: 119 LLTMSASVPGMKPPNCATISASSCGPSP------------------GQSAAFFVALYLIA 160
Query: 183 VGEGAVRACLPALGGDQFDEGDAAEQRQAASFFNWYAFXXXXXXXXXXXXXXXXQDNKGW 242
+G G ++ C+ + G DQFD+ D E R ASFFNW+ Q N GW
Sbjct: 161 LGTGGIKPCVSSFGADQFDDADPREHRSKASFFNWFYMSINVGALVASSVLVWVQMNVGW 220
Query: 243 DXXXXXXXXXXXXXXXXXXXXMPTYRNKVPAGSPITRILQV 283
YR++ P GSP+TR+LQV
Sbjct: 221 GWGFGIPAVAMAVAVASFLMGSSLYRHQKPGGSPLTRMLQV 261
>Os01g0142800 Similar to Peptide transporter
Length = 580
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 46/103 (44%)
Query: 181 ICVGEGAVRACLPALGGDQFDEGDAAEQRQAASFFNWYAFXXXXXXXXXXXXXXXXQDNK 240
I +G G ++ C+ + G DQFDE D E+R +SFFNW+ F Q +
Sbjct: 150 IALGTGGIKPCVSSFGADQFDENDEGEKRSKSSFFNWFYFSINIGALVASSVLVYVQTHV 209
Query: 241 GWDXXXXXXXXXXXXXXXXXXXXMPTYRNKVPAGSPITRILQV 283
GW P YR++ P GSP+TRI QV
Sbjct: 210 GWGWGFGIPAVVMAVAVASFFVGTPLYRHQRPGGSPLTRIAQV 252
>Os03g0235300 Similar to LeOPT1
Length = 195
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 45/103 (43%)
Query: 181 ICVGEGAVRACLPALGGDQFDEGDAAEQRQAASFFNWYAFXXXXXXXXXXXXXXXXQDNK 240
I +G G ++ C+ + G DQFD+ D A++ + SFFNW+ F QDN
Sbjct: 51 IALGTGGIKPCVSSFGADQFDDSDPADRVKKGSFFNWFYFCINIGAFVSGTVIVWIQDNS 110
Query: 241 GWDXXXXXXXXXXXXXXXXXXXXMPTYRNKVPAGSPITRILQV 283
GW YR + P GSP+TR+ QV
Sbjct: 111 GWGIGFAIPTIFMALAIASFFVASNMYRFQKPGGSPLTRVCQV 153
>Os06g0264500 TGF-beta receptor, type I/II extracellular region family protein
Length = 597
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 40/95 (42%)
Query: 189 RACLPALGGDQFDEGDAAEQRQAASFFNWYAFXXXXXXXXXXXXXXXXQDNKGWDXXXXX 248
R C+ A G DQFDE +AAE+ + FFNWY F QDN GW
Sbjct: 152 RPCVVAFGADQFDESEAAERARTWGFFNWYYFCNGASQLVAVTAVVYVQDNVGWGWGLGV 211
Query: 249 XXXXXXXXXXXXXXXMPTYRNKVPAGSPITRILQV 283
P YR P+GSP TR+ QV
Sbjct: 212 PTFCMAVSVVAFVAGYPLYRRLHPSGSPFTRLAQV 246
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.138 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,721,713
Number of extensions: 190307
Number of successful extensions: 673
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 679
Number of HSP's successfully gapped: 17
Length of query: 283
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 183
Effective length of database: 11,814,401
Effective search space: 2162035383
Effective search space used: 2162035383
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 155 (64.3 bits)