Os11g0282800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : TGF-beta receptor, type I/II extracellular region family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0282800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : TGF-beta receptor, type I/II extracellular region family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 268.87 | 0.77 | 8.24 | -4.27 | 0.655 | 2.72 | -0.45 | 0.73 | -0.504 | 13.3 | 21.49 | 1499 | -- | -- |
| 269.13 | 0.764 | 8.26 | -4.47 | 0.667 | 2.73 | -0.489 | -- | -0.539 | 13.3 | 21.83 | 1490 | -- | -- |
| 269.59 | 0.765 | 8.24 | -4.27 | 0.686 | 2.71 | -- | 0.743 | -0.496 | 13.4 | 21.67 | 1471 | -- | -- |
| 269.78 | 0.765 | 8.26 | -4.49 | 0.721 | 2.74 | -- | -- | -0.55 | 13.4 | 21.93 | 1440 | -- | -- |
| 290.6 | 0.794 | 8.25 | -4.31 | -- | 2.81 | -- | 0.824 | -0.513 | -- | 21.5 | 1650 | -- | -- |
| 542.35 | 1.09 | 8.12 | -3.47 | 0.516 | -- | -0.646 | -- | 0.0911 | 13.2 | -- | -- | -- | -- |
| 544.04 | 1.09 | 8.12 | -3.5 | 0.516 | -- | -- | -- | 0.0871 | 13 | -- | -- | -- | -- |
| 291.1 | 0.795 | 8.27 | -4.53 | -- | 2.85 | -- | -- | -0.572 | -- | 21.7 | 1641 | -- | -- |
| 750.48 | 1.28 | 8.05 | -- | 0.82 | 1.65 | -- | -- | 0.381 | 13.5 | 25.36 | 1302 | -- | -- |
| 560.6 | 1.11 | 8.13 | -3.52 | -- | -- | -- | -- | 0.0772 | -- | -- | -- | -- | -- |
| 866.45 | 1.38 | 8.03 | -- | 0.575 | -- | -- | -- | 0.477 | 13.2 | -- | -- | -- | -- |
| 775.35 | 1.3 | 8.03 | -- | -- | 1.76 | -- | -- | 0.517 | -- | 27.1 | 1678 | -- | -- |
| 886.86 | 1.39 | 8.04 | -- | -- | -- | -- | -- | 0.467 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 250.40 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 11 | 257.90 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 21 | 260.39 | radiation | 10 | 14400 | < th | dose dependent | rect. | 16 | 14 |
| 22 | 260.57 | radiation | 10 | 14400 | < th | dose dependent | rect. | 18 | 12 |
| 35 | 261.22 | radiation | 10 | 14400 | < th | dose dependent | rect. | 2 | 4 |
| 45 | 261.70 | radiation | 10 | 14400 | < th | dose dependent | rect. | 21 | 9 |
| 49 | 261.75 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 55 | 261.85 | radiation | 40 | 14400 | < th | dose dependent | rect. | 20 | 10 |
| 64 | 262.02 | humidity | 90 | 43200 | > th | dose dependent | rect. | 10 | 14 |
| 67 | 262.10 | radiation | 1 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 71 | 262.17 | radiation | 1 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 91 | 262.68 | radiation | 1 | 14400 | < th | dose independent | rect. | 15 | 15 |
| 113 | 263.55 | radiation | 1 | 14400 | > th | dose independent | rect. | 15 | 15 |
| 118 | 263.87 | radiation | 1 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 120 | 263.94 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 21 |
| 141 | 264.38 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 20 |
| 143 | 264.47 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 146 | 264.51 | radiation | 1 | 14400 | < th | dose independent | sin | 14 | NA |
| 164 | 264.67 | radiation | 1 | 14400 | > th | dose independent | rect. | 8 | 22 |
| 167 | 264.73 | radiation | 1 | 43200 | > th | dose independent | rect. | 14 | 5 |
| 180 | 264.74 | radiation | 1 | 14400 | < th | dose independent | rect. | 15 | 9 |
| 185 | 264.76 | radiation | 1 | 14400 | < th | dose independent | rect. | 15 | 7 |
| 194 | 264.86 | radiation | 1 | 43200 | < th | dose independent | sin | 18 | NA |
| 198 | 264.86 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 199 | 264.87 | radiation | 1 | 43200 | > th | dose independent | sin | 17 | NA |
| 246 | 265.09 | radiation | 1 | 43200 | < th | dose independent | rect. | 10 | 9 |
| 247 | 265.09 | radiation | 1 | 43200 | < th | dose independent | rect. | 10 | 12 |
| 268 | 265.11 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 9 |
| 351 | 265.41 | humidity | 90 | 43200 | > th | dose dependent | sin | 18 | NA |
| 357 | 265.47 | radiation | 1 | 43200 | > th | dose independent | rect. | 9 | 10 |
| 392 | 265.67 | radiation | 10 | 14400 | < th | dose dependent | rect. | 16 | 3 |
| 393 | 265.68 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 20 |
| 491 | 266.04 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 495 | 266.07 | humidity | 90 | 43200 | < th | dose independent | sin | 15 | NA |
| 504 | 266.16 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 17 |
| 515 | 266.17 | radiation | 1 | 43200 | < th | dose independent | rect. | 6 | 23 |
| 529 | 266.32 | radiation | 1 | 43200 | > th | dose independent | rect. | 6 | 23 |
| 531 | 266.34 | temperature | 15 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 545 | 266.45 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 547 | 266.49 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 13 |
| 551 | 266.51 | radiation | 1 | 43200 | < th | dose independent | rect. | 6 | 13 |
| 552 | 266.51 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 15 |
| 553 | 266.51 | radiation | 1 | 43200 | < th | dose independent | rect. | 6 | 18 |
| 592 | 266.63 | radiation | 1 | 43200 | > th | dose independent | rect. | 6 | 13 |
| 606 | 266.66 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 20 |
| 619 | 266.79 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 17 |
| 626 | 266.85 | radiation | 1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 643 | 266.91 | temperature | 30 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 659 | 267.01 | radiation | 1 | 14400 | < th | dose independent | rect. | 15 | 20 |
| 680 | 267.09 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 688 | 267.12 | radiation | 1 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 705 | 267.19 | humidity | 90 | 43200 | < th | dose independent | rect. | 1 | 22 |
| 783 | 267.45 | radiation | 1 | 14400 | < th | dose independent | rect. | 21 | 21 |
| 785 | 267.46 | radiation | 1 | 14400 | < th | dose independent | rect. | 1 | 17 |
| 787 | 267.46 | radiation | 1 | 14400 | < th | dose independent | rect. | 23 | 19 |
| 835 | 267.62 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 23 |
| 898 | 267.85 | humidity | 90 | 43200 | < th | dose independent | no | NA | NA |
| 903 | 267.89 | radiation | 1 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 904 | 267.89 | radiation | 1 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 919 | 267.93 | radiation | 1 | 14400 | < th | dose independent | rect. | 23 | 7 |
| 927 | 267.94 | radiation | 1 | 14400 | > th | dose independent | rect. | 15 | 20 |
| 928 | 267.94 | humidity | 90 | 43200 | < th | dose independent | rect. | 12 | 23 |
| 962 | 268.06 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 5 |
| 965 | 268.07 | radiation | 40 | 14400 | < th | dose dependent | rect. | 17 | 7 |
| 983 | 268.13 | radiation | 1 | 43200 | > th | dose independent | rect. | 16 | 23 |
| 988 | 268.14 | radiation | 40 | 14400 | < th | dose dependent | rect. | 17 | 1 |