Os03g0719900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Peptide transporter 1.
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Os03g0719900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Peptide transporter 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.31 | 0.368 | 9.75 | 0.623 | 0.463 | -0.952 | 0.13 | 0.914 | 0.535 | 18.2 | 2.41 | 10 | -- | -- |
| 61.63 | 0.366 | 9.74 | 0.649 | 0.486 | -1.08 | 0.0898 | -- | 0.569 | 17.8 | 4.049 | 49 | -- | -- |
| 61.35 | 0.365 | 9.75 | 0.623 | 0.464 | -0.961 | -- | 0.901 | 0.536 | 18.1 | 2.335 | 9 | -- | -- |
| 61.63 | 0.366 | 9.74 | 0.653 | 0.501 | -1.11 | -- | -- | 0.572 | 17.5 | 3.261 | 49 | -- | -- |
| 72.37 | 0.396 | 9.74 | 0.612 | -- | -0.945 | -- | 0.857 | 0.534 | -- | 0.68 | 9 | -- | -- |
| 77.03 | 0.411 | 9.75 | 0.641 | 0.68 | -- | -0.193 | -- | 0.542 | 21.4 | -- | -- | -- | -- |
| 77.16 | 0.411 | 9.75 | 0.649 | 0.681 | -- | -- | -- | 0.542 | 21.3 | -- | -- | -- | -- |
| 74.32 | 0.402 | 9.74 | 0.643 | -- | -0.955 | -- | -- | 0.531 | -- | -3.467 | 9 | -- | -- |
| 72.61 | 0.397 | 9.75 | -- | 0.507 | -1.13 | -- | -- | 0.505 | 17.4 | 2.745 | 53 | -- | -- |
| 104.24 | 0.477 | 9.73 | 0.652 | -- | -- | -- | -- | 0.539 | -- | -- | -- | -- | -- |
| 88.25 | 0.439 | 9.77 | -- | 0.681 | -- | -- | -- | 0.47 | 21.4 | -- | -- | -- | -- |
| 85.02 | 0.429 | 9.75 | -- | -- | -1.01 | -- | -- | 0.487 | -- | 3.232 | 49 | -- | -- |
| 115.45 | 0.502 | 9.75 | -- | -- | -- | -- | -- | 0.467 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.94 | humidity | 90 | 10 | < th | dose dependent | rect. | 9 | 7 |
| 2 | 58.15 | humidity | 80 | 10 | < th | dose dependent | rect. | 23 | 17 |
| 4 | 58.17 | humidity | 80 | 10 | < th | dose dependent | rect. | 1 | 15 |
| 9 | 58.25 | humidity | 80 | 10 | < th | dose dependent | rect. | 7 | 9 |
| 15 | 58.46 | humidity | 80 | 90 | < th | dose dependent | rect. | 23 | 16 |
| 25 | 58.56 | humidity | 80 | 90 | < th | dose dependent | rect. | 6 | 9 |
| 69 | 59.04 | humidity | 80 | 90 | < th | dose dependent | sin | 4 | NA |
| 72 | 59.12 | humidity | 80 | 10 | < th | dose dependent | rect. | 11 | 5 |
| 130 | 59.62 | humidity | 80 | 10 | < th | dose dependent | sin | 3 | NA |
| 140 | 59.69 | humidity | 80 | 30 | < th | dose dependent | rect. | 11 | 3 |
| 167 | 59.87 | humidity | 70 | 30 | < th | dose independent | rect. | 11 | 3 |
| 168 | 59.87 | radiation | 10 | 90 | > th | dose independent | rect. | 9 | 7 |
| 206 | 60.24 | radiation | 1 | 90 | > th | dose dependent | rect. | 8 | 8 |
| 220 | 60.30 | radiation | 1 | 10 | > th | dose dependent | rect. | 9 | 21 |
| 221 | 60.33 | radiation | 1 | 90 | > th | dose dependent | sin | 1 | NA |
| 230 | 60.38 | radiation | 1 | 10 | > th | dose dependent | rect. | 9 | 7 |
| 232 | 60.39 | humidity | 80 | 270 | < th | dose dependent | rect. | 11 | 1 |
| 235 | 60.41 | radiation | 1 | 270 | > th | dose dependent | rect. | 8 | 4 |
| 238 | 60.43 | radiation | 40 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 242 | 60.45 | radiation | 1 | 10 | > th | dose dependent | rect. | 9 | 10 |
| 255 | 60.46 | radiation | 10 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 260 | 60.51 | radiation | 20 | 90 | < th | dose independent | rect. | 5 | 15 |
| 265 | 60.57 | radiation | 40 | 90 | < th | dose dependent | rect. | 5 | 15 |
| 290 | 60.73 | radiation | 30 | 90 | < th | dose dependent | sin | 1 | NA |
| 309 | 60.78 | radiation | 1 | 10 | > th | dose dependent | sin | 23 | NA |
| 334 | 60.87 | radiation | 1 | 90 | > th | dose dependent | rect. | 5 | 11 |
| 357 | 60.92 | radiation | 1 | 270 | > th | dose dependent | rect. | 5 | 7 |
| 392 | 61.02 | humidity | 70 | 270 | < th | dose independent | rect. | 11 | 1 |
| 395 | 61.05 | radiation | 40 | 90 | < th | dose independent | rect. | 5 | 15 |
| 406 | 61.07 | radiation | 1 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 407 | 61.08 | radiation | 40 | 90 | < th | dose dependent | rect. | 12 | 23 |
| 415 | 61.12 | humidity | 50 | 90 | > th | dose dependent | sin | 3 | NA |
| 447 | 61.22 | radiation | 1 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 465 | 61.30 | radiation | 20 | 90 | < th | dose independent | rect. | 11 | 23 |
| 486 | 61.33 | radiation | 20 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 488 | 61.33 | radiation | 40 | 10 | < th | dose dependent | rect. | 12 | 23 |
| 542 | 61.39 | radiation | 1 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 566 | 61.45 | radiation | 1 | 10 | > th | dose dependent | rect. | 18 | 22 |
| 573 | 61.46 | radiation | 1 | 10 | > th | dose dependent | rect. | 5 | 11 |
| 625 | 61.50 | humidity | 50 | 10 | > th | dose dependent | sin | 2 | NA |
| 635 | 61.54 | radiation | 1 | 10 | > th | dose dependent | rect. | 9 | 5 |
| 645 | 61.57 | radiation | 1 | 10 | > th | dose dependent | no | NA | NA |
| 735 | 61.60 | radiation | 20 | 90 | < th | dose dependent | rect. | 5 | 10 |
| 785 | 61.71 | humidity | 60 | 90 | > th | dose dependent | rect. | 5 | 12 |
| 796 | 61.74 | humidity | 80 | 30 | < th | dose independent | rect. | 9 | 7 |
| 827 | 61.79 | radiation | 40 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 828 | 61.80 | radiation | 40 | 90 | < th | dose independent | rect. | 12 | 23 |
| 839 | 61.83 | humidity | 70 | 30 | < th | dose independent | rect. | 7 | 7 |
| 897 | 61.87 | radiation | 1 | 90 | > th | dose dependent | no | NA | NA |
| 972 | 61.90 | humidity | 70 | 30 | < th | dose independent | rect. | 11 | 5 |