BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0265000 Os11g0265000|AK103877
(491 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0265000 Uridine kinase family protein 979 0.0
Os02g0273000 Similar to Uridine kinase-like protein 947 0.0
AK119843 870 0.0
Os09g0505800 Similar to Uridine kinase-like protein 664 0.0
Os08g0530000 Similar to Uridine kinase-like protein 650 0.0
Os05g0455700 Uracil phosphoribosyl transferase family protein 76 6e-14
Os02g0698000 Similar to Phosphoribulokinase, chloroplast pr... 75 1e-13
Os04g0595700 Phosphoribulokinase/uridine kinase family protein 74 2e-13
Os02g0708200 Uridine kinase family protein 72 8e-13
>Os11g0265000 Uridine kinase family protein
Length = 491
Score = 979 bits (2532), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/491 (97%), Positives = 481/491 (97%)
Query: 1 MGSTSRPVDDEVLDAATGVHYSALRLEELNMNGSVSGEDQPTTSGVENGHQEPFVIGVAG 60
MGSTSRPVDDEVLDAATGVHYSALRLEELNMNGSVSGEDQPTTSGVENGHQEPFVIGVAG
Sbjct: 1 MGSTSRPVDDEVLDAATGVHYSALRLEELNMNGSVSGEDQPTTSGVENGHQEPFVIGVAG 60
Query: 61 GASSGKSTVCKMIIDQLRDQRVVVVTQESFYYGLSDEELVHVHDYNFDHPDAFDTELLLS 120
GASSGKSTVCKMIIDQLRDQRVVVVTQESFYYGLSDEELVHVHDYNFDHPDAFDTELLLS
Sbjct: 61 GASSGKSTVCKMIIDQLRDQRVVVVTQESFYYGLSDEELVHVHDYNFDHPDAFDTELLLS 120
Query: 121 CMENLKHGKAVDIPNYNFKTYKSVASARKVNPSDVIILEGILVFHDSRVRDLMNMKIFVD 180
CMENLKHGKAVDIPNYNFKTYKSVASARKVNPSDVIILEGILVFHDSRVRDLMNMKIFVD
Sbjct: 121 CMENLKHGKAVDIPNYNFKTYKSVASARKVNPSDVIILEGILVFHDSRVRDLMNMKIFVD 180
Query: 181 TDADVRLTRRIRRDTIEKGRDIKTVLDQYSKFVKPAFEDFILPTKKYADIIIPRGGDNDV 240
TDADVRLTRRIRRDTIEKGRDIKTVLDQYSKFVKPAFEDFILPTKKYADIIIPRGGDNDV
Sbjct: 181 TDADVRLTRRIRRDTIEKGRDIKTVLDQYSKFVKPAFEDFILPTKKYADIIIPRGGDNDV 240
Query: 241 AIDLIVQHIRTKLGQHDLCKVHPNLYVIQTTYQIRGMHTIIRDAATTTHDFIFYADRLIR 300
AIDLIVQHIRTKLGQHDLCKVHPNLYVIQTTYQIRGMHTIIRDAATTTHDFIFYADRLIR
Sbjct: 241 AIDLIVQHIRTKLGQHDLCKVHPNLYVIQTTYQIRGMHTIIRDAATTTHDFIFYADRLIR 300
Query: 301 LVVEHGLGHLPFKEKQVITPTGSVYTGVEFSKRLCGISVIRSGESMENALRAXXXXXXXX 360
LVVEHGLGHLPFKEKQVITPTGSVYTGVEFSKRLCGISVIRSGESMENALRA
Sbjct: 301 LVVEHGLGHLPFKEKQVITPTGSVYTGVEFSKRLCGISVIRSGESMENALRACCKGIKIG 360
Query: 361 XXLIHREGDNGKQLIYHNVPKDIANRHVLLLDPILGTGNSAVQAISLLLKKGVQETNIIF 420
LIHREGDNGKQLIYHNVPKDIANRHVLLLDPILGTGNSAVQAISLLLKKGVQETNIIF
Sbjct: 361 KILIHREGDNGKQLIYHNVPKDIANRHVLLLDPILGTGNSAVQAISLLLKKGVQETNIIF 420
Query: 421 LNLISAPQGVHVVSKRFPRVKIVTSEIDFGLNDDFRVIPGMGEFGDRYFGTDDYQSSTPF 480
LNLISAPQGVHVVSKRFPRVKIVTSEIDFGLNDDFRVIPGMGEFGDRYFGTDDYQSSTPF
Sbjct: 421 LNLISAPQGVHVVSKRFPRVKIVTSEIDFGLNDDFRVIPGMGEFGDRYFGTDDYQSSTPF 480
Query: 481 FCDEKNRVRLL 491
FCDEKNRVRLL
Sbjct: 481 FCDEKNRVRLL 491
>Os02g0273000 Similar to Uridine kinase-like protein
Length = 489
Score = 947 bits (2449), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/488 (95%), Positives = 474/488 (97%), Gaps = 2/488 (0%)
Query: 5 SRPVDDEVLDAAT-GVHYSALRLEELNMNGSVSGEDQPTTSGVENGHQEPFVIGVAGGAS 63
SRPVD EVLDAA GVHYS LRL+ELN+NGS++GE+QPTTSGVENGHQEPFVIGVAGGAS
Sbjct: 3 SRPVD-EVLDAAAAGVHYSTLRLDELNINGSMTGEEQPTTSGVENGHQEPFVIGVAGGAS 61
Query: 64 SGKSTVCKMIIDQLRDQRVVVVTQESFYYGLSDEELVHVHDYNFDHPDAFDTELLLSCME 123
SGKSTVCKMIIDQLRDQRVVVVTQESFYYGLSDEELVHVHDYNFDHPDAFDTELLLSCME
Sbjct: 62 SGKSTVCKMIIDQLRDQRVVVVTQESFYYGLSDEELVHVHDYNFDHPDAFDTELLLSCME 121
Query: 124 NLKHGKAVDIPNYNFKTYKSVASARKVNPSDVIILEGILVFHDSRVRDLMNMKIFVDTDA 183
NLKHGKAVDIPNYNFKTYKSVASARKVNPSDVIILEGILVFHDSRVRDLMNMKIFVDTDA
Sbjct: 122 NLKHGKAVDIPNYNFKTYKSVASARKVNPSDVIILEGILVFHDSRVRDLMNMKIFVDTDA 181
Query: 184 DVRLTRRIRRDTIEKGRDIKTVLDQYSKFVKPAFEDFILPTKKYADIIIPRGGDNDVAID 243
DVRLTRRIRRDTIEKGRDIKTVLDQYSKFVKPAFEDFILPTKKYADIIIPRGGDNDVAID
Sbjct: 182 DVRLTRRIRRDTIEKGRDIKTVLDQYSKFVKPAFEDFILPTKKYADIIIPRGGDNDVAID 241
Query: 244 LIVQHIRTKLGQHDLCKVHPNLYVIQTTYQIRGMHTIIRDAATTTHDFIFYADRLIRLVV 303
LIVQHIRTKLGQHDLCKVHPNLYVIQTTYQIRGMHTIIRDAATTTHDFIFYADRLIRLVV
Sbjct: 242 LIVQHIRTKLGQHDLCKVHPNLYVIQTTYQIRGMHTIIRDAATTTHDFIFYADRLIRLVV 301
Query: 304 EHGLGHLPFKEKQVITPTGSVYTGVEFSKRLCGISVIRSGESMENALRAXXXXXXXXXXL 363
EHGLGHLPFKEKQVITPTGSVYTGVEFSKRLCGISVIRSGESMENALRA L
Sbjct: 302 EHGLGHLPFKEKQVITPTGSVYTGVEFSKRLCGISVIRSGESMENALRACCKGIKIGKIL 361
Query: 364 IHREGDNGKQLIYHNVPKDIANRHVLLLDPILGTGNSAVQAISLLLKKGVQETNIIFLNL 423
IHREGDNGKQLIYHN+PKDIANRHVLLLDPILGTGNSAVQAISLLLKKGVQETNIIFLNL
Sbjct: 362 IHREGDNGKQLIYHNLPKDIANRHVLLLDPILGTGNSAVQAISLLLKKGVQETNIIFLNL 421
Query: 424 ISAPQGVHVVSKRFPRVKIVTSEIDFGLNDDFRVIPGMGEFGDRYFGTDDYQSSTPFFCD 483
ISAPQGVHVVSKRFPRVKIVTSEI+FGLNDDFRVIPGMGEFGDRYFGTDDYQSSTPFFCD
Sbjct: 422 ISAPQGVHVVSKRFPRVKIVTSEIEFGLNDDFRVIPGMGEFGDRYFGTDDYQSSTPFFCD 481
Query: 484 EKNRVRLL 491
EKNRVRLL
Sbjct: 482 EKNRVRLL 489
>AK119843
Length = 752
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/454 (94%), Positives = 433/454 (95%), Gaps = 1/454 (0%)
Query: 39 DQPT-TSGVENGHQEPFVIGVAGGASSGKSTVCKMIIDQLRDQRVVVVTQESFYYGLSDE 97
D+P TSG + +IGVAGGASSGKSTVCKMIIDQLRDQRVVVVTQESFYYGLSDE
Sbjct: 299 DRPGGTSGDRTAFRYSRIIGVAGGASSGKSTVCKMIIDQLRDQRVVVVTQESFYYGLSDE 358
Query: 98 ELVHVHDYNFDHPDAFDTELLLSCMENLKHGKAVDIPNYNFKTYKSVASARKVNPSDVII 157
ELVHVHDYNFDHPDAFDTELLLSCMENLKHGKAVDIPNYNFKTYKSVASARKVNPSDVII
Sbjct: 359 ELVHVHDYNFDHPDAFDTELLLSCMENLKHGKAVDIPNYNFKTYKSVASARKVNPSDVII 418
Query: 158 LEGILVFHDSRVRDLMNMKIFVDTDADVRLTRRIRRDTIEKGRDIKTVLDQYSKFVKPAF 217
LEGILVFHDSRVRDLMNMKIFVDTDADVRLTRRIRRDTIEKGRDIKTVLDQYSKFVKPAF
Sbjct: 419 LEGILVFHDSRVRDLMNMKIFVDTDADVRLTRRIRRDTIEKGRDIKTVLDQYSKFVKPAF 478
Query: 218 EDFILPTKKYADIIIPRGGDNDVAIDLIVQHIRTKLGQHDLCKVHPNLYVIQTTYQIRGM 277
EDFILPTKKYADIIIPRGGDNDVAIDLIVQHIRTKLGQHDLCKVHPNLYVIQTTYQIRGM
Sbjct: 479 EDFILPTKKYADIIIPRGGDNDVAIDLIVQHIRTKLGQHDLCKVHPNLYVIQTTYQIRGM 538
Query: 278 HTIIRDAATTTHDFIFYADRLIRLVVEHGLGHLPFKEKQVITPTGSVYTGVEFSKRLCGI 337
HTIIRDAATTTHDFIFYADRLIRLVVEHGLGHLPFKEKQVITPTGSVYTGVEFSKRLCGI
Sbjct: 539 HTIIRDAATTTHDFIFYADRLIRLVVEHGLGHLPFKEKQVITPTGSVYTGVEFSKRLCGI 598
Query: 338 SVIRSGESMENALRAXXXXXXXXXXLIHREGDNGKQLIYHNVPKDIANRHVLLLDPILGT 397
SVIRSGESMENALRA LIHREGDNGKQLIYHN+PKDIANRHVL LDPILGT
Sbjct: 599 SVIRSGESMENALRACCKGIKIGKILIHREGDNGKQLIYHNLPKDIANRHVLSLDPILGT 658
Query: 398 GNSAVQAISLLLKKGVQETNIIFLNLISAPQGVHVVSKRFPRVKIVTSEIDFGLNDDFRV 457
GNSAVQAISLLLKKGVQETNIIFLNLISAPQGVHVVSKRFPRVKIVTSEI+FGLNDDFRV
Sbjct: 659 GNSAVQAISLLLKKGVQETNIIFLNLISAPQGVHVVSKRFPRVKIVTSEIEFGLNDDFRV 718
Query: 458 IPGMGEFGDRYFGTDDYQSSTPFFCDEKNRVRLL 491
IPGMGEFGDRYFGTDDYQSSTPFFCDEKNRVRLL
Sbjct: 719 IPGMGEFGDRYFGTDDYQSSTPFFCDEKNRVRLL 752
>Os09g0505800 Similar to Uridine kinase-like protein
Length = 496
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/490 (65%), Positives = 386/490 (78%), Gaps = 26/490 (5%)
Query: 10 DEVLDAATGVHYSALRLEELNM----------------------NGSVSGEDQPTTSG-- 45
D+V+D+A G H+S LRLE L + NG+V +
Sbjct: 7 DDVMDSAVGAHFSGLRLEALRLSSPSAPSSPSSAKAAAAAAAHSNGAVYANGVAADAAEL 66
Query: 46 -VENGHQEPFVIGVAGGASSGKSTVCKMIIDQLRDQRVVVVTQESFYYGLSDEELVHVHD 104
+ ++PFVIGV+GG +SGK+TVC MII QL D RVV+V Q+SFY GL+ EE H D
Sbjct: 67 VSPSALRQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTAEESAHAQD 126
Query: 105 YNFDHPDAFDTELLLSCMENLKHGKAVDIPNYNFKTYK-SVASARKVNPSDVIILEGILV 163
YNFDHPDAFDTE LL CM LK + V++P Y+FK ++ S S RKVN SDVIILEGILV
Sbjct: 127 YNFDHPDAFDTEQLLECMGQLKRAQPVNVPIYDFKNHRRSSESFRKVNASDVIILEGILV 186
Query: 164 FHDSRVRDLMNMKIFVDTDADVRLTRRIRRDTIEKGRDIKTVLDQYSKFVKPAFEDFILP 223
FHD RVR+LM+MKIFVDTDAD+RL RRIRRDT+E+GRD+ +VL+QY +FVKPAF+DF+LP
Sbjct: 187 FHDQRVRNLMDMKIFVDTDADIRLARRIRRDTVERGRDVSSVLEQYGRFVKPAFDDFVLP 246
Query: 224 TKKYADIIIPRGGDNDVAIDLIVQHIRTKLGQHDLCKVHPNLYVIQTTYQIRGMHTIIRD 283
+KKYAD+IIPRGGDN VAIDLIVQHIRTKLGQHDLCK++P++YV+QTT+QIRGMHT+IRD
Sbjct: 247 SKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPHVYVVQTTFQIRGMHTLIRD 306
Query: 284 AATTTHDFIFYADRLIRLVVEHGLGHLPFKEKQVITPTGSVYTGVEFSKRLCGISVIRSG 343
TT DF+FY+DRLIRLVVEHGLGHLPF EKQ+ITPTGS+Y GVEF K+LCG+S++RSG
Sbjct: 307 RDITTPDFVFYSDRLIRLVVEHGLGHLPFTEKQIITPTGSIYMGVEFCKKLCGVSIVRSG 366
Query: 344 ESMENALRAXXXXXXXXXXLIHREGDNGKQLIYHNVPKDIANRHVLLLDPILGTGNSAVQ 403
ESMENALRA LIHR GDNG+QLIYH +P DIA RHVLLLDP+LGTGNSA Q
Sbjct: 367 ESMENALRACCKGIKIGKILIHRVGDNGQQLIYHKLPMDIAERHVLLLDPVLGTGNSANQ 426
Query: 404 AISLLLKKGVQETNIIFLNLISAPQGVHVVSKRFPRVKIVTSEIDFGLNDDFRVIPGMGE 463
AI LL++KGV E IIFLNLISAP+G+ V KRFPR+KIVTSEID GL++++RVIPG+GE
Sbjct: 427 AIELLIRKGVPEERIIFLNLISAPEGIQCVCKRFPRLKIVTSEIDTGLSEEYRVIPGLGE 486
Query: 464 FGDRYFGTDD 473
+GDRYFGTD+
Sbjct: 487 YGDRYFGTDN 496
>Os08g0530000 Similar to Uridine kinase-like protein
Length = 491
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/427 (71%), Positives = 362/427 (84%), Gaps = 1/427 (0%)
Query: 47 ENGHQEPFVIGVAGGASSGKSTVCKMIIDQLRDQRVVVVTQESFYYGLSDEELVHVHDYN 106
E G ++PFVIGV+GG +SGK+TVC MII QL D RVV+V Q+SFY GL++EE V DYN
Sbjct: 65 EEGSKQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTEEESDRVQDYN 124
Query: 107 FDHPDAFDTELLLSCMENLKHGKAVDIPNYNFKTYKSVA-SARKVNPSDVIILEGILVFH 165
FDHPDAFDTE LL CM LK G +V+IP Y+FK ++ + S RKVN SDVIILEGILVFH
Sbjct: 125 FDHPDAFDTEQLLECMGQLKSGLSVNIPIYDFKNHRRCSESFRKVNASDVIILEGILVFH 184
Query: 166 DSRVRDLMNMKIFVDTDADVRLTRRIRRDTIEKGRDIKTVLDQYSKFVKPAFEDFILPTK 225
D RVRDLM+MKIFVDTDAD+RL RRIRRDT+E+GRD+ +VL+QY +FVKPAF+DF+LP+K
Sbjct: 185 DQRVRDLMDMKIFVDTDADIRLARRIRRDTVERGRDVISVLEQYGRFVKPAFDDFVLPSK 244
Query: 226 KYADIIIPRGGDNDVAIDLIVQHIRTKLGQHDLCKVHPNLYVIQTTYQIRGMHTIIRDAA 285
KYAD+IIPRGGDN VAIDLIVQHIRTKLGQHDLCK++PN+YV+ TT+QIRGMHT+IRD
Sbjct: 245 KYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNVYVVNTTFQIRGMHTLIRDRD 304
Query: 286 TTTHDFIFYADRLIRLVVEHGLGHLPFKEKQVITPTGSVYTGVEFSKRLCGISVIRSGES 345
T DF+FY+DRLIRLVVEHGLGHLPF EKQ++TPTGS Y GV+F K+LCG+S+IRSGES
Sbjct: 305 IATPDFVFYSDRLIRLVVEHGLGHLPFTEKQIVTPTGSTYMGVDFCKKLCGVSIIRSGES 364
Query: 346 MENALRAXXXXXXXXXXLIHREGDNGKQLIYHNVPKDIANRHVLLLDPILGTGNSAVQAI 405
MENALRA LIHR+GDNG+QLIYH P DIA RHVLL+DP+LGTGNSA QAI
Sbjct: 365 MENALRACCKGIKIGKILIHRDGDNGQQLIYHKFPLDIAERHVLLMDPVLGTGNSANQAI 424
Query: 406 SLLLKKGVQETNIIFLNLISAPQGVHVVSKRFPRVKIVTSEIDFGLNDDFRVIPGMGEFG 465
LL+ GV E I+FLNLISAP+GVH V KRFPR+KIVTSEI+ GLN+++RVIPG+GE+G
Sbjct: 425 ELLISSGVPEERIMFLNLISAPEGVHCVCKRFPRLKIVTSEIETGLNEEYRVIPGLGEYG 484
Query: 466 DRYFGTD 472
DRYFGTD
Sbjct: 485 DRYFGTD 491
>Os05g0455700 Uracil phosphoribosyl transferase family protein
Length = 301
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 8/204 (3%)
Query: 274 IRGMHTIIRDAATTTHDFIFYADRLIRLVV-EHGLGHLPFKEKQVITPTGSVYTGVEF-- 330
I+ +++R+ T F L RL++ E LP ++ TP + VEF
Sbjct: 100 IKHWVSVLRNEQTPCAIFKSAMAELGRLLIYEASRDWLPTITGEIQTPVA--VSSVEFID 157
Query: 331 -SKRLCGISVIRSGESMENALRAXXXXXXXXXXLIHREGDNGKQLIY-HNVPKDIAN-RH 387
+ + + ++R+G +M + + R+ + + IY +N+P I
Sbjct: 158 PREPVMVVPILRAGLAMAENASSVLPATKTYHLGLRRDEETLQPSIYLNNLPDKIPEGTR 217
Query: 388 VLLLDPILGTGNSAVQAISLLLKKGVQETNIIFLNLISAPQGVHVVSKRFPRVKIVTSEI 447
VL++DP+L TG + V AI LL+++GV I ++ ++AP + +S +FP + + T I
Sbjct: 218 VLVVDPMLATGGTIVAAIDLLVERGVTSKQIKVVSAVAAPPALQKLSNKFPGLHVYTGTI 277
Query: 448 DFGLNDDFRVIPGMGEFGDRYFGT 471
D +++ ++PG+G+ GDR F T
Sbjct: 278 DSEVDERGFIVPGLGDAGDRSFAT 301
>Os02g0698000 Similar to Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19)
(Phosphopentokinase) (PRKase) (PRK)
Length = 403
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 110 PDAFDTELLLSCMENLKHGKAVDIPNYNFKTYKSVASARKVNPSDVIILEGILVFHDSRV 169
P A D +L+ ++ +K GKA++ P YN T + + P + ++EG+ D RV
Sbjct: 129 PRANDFDLMYEQVKAIKEGKAIEKPIYNHVT-GLLDPPELIQPPKIFVIEGLHPMFDERV 187
Query: 170 RDLMNMKIFVDTDADVRLTRRIRRDTIEKGRDIKTVLDQYSKFVKPAFEDFILPTKKYAD 229
RDL++ I++D +V+ +I+RD E+G ++++ KP F+ FI P K+YAD
Sbjct: 188 RDLLDFSIYLDISDEVKFAWKIQRDMAERGHSLESIKASIEA-RKPDFDAFIDPQKQYAD 246
Query: 230 III 232
+I
Sbjct: 247 AVI 249
>Os04g0595700 Phosphoribulokinase/uridine kinase family protein
Length = 402
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
Query: 110 PDAFDTELLLSCMENLKHGKAVDIPNYNFKTYKSVASARKVNPSDVIILEGILVFHDSRV 169
P A D +L+ ++ +K G+AV P YN T + + P ++++EG+ +D RV
Sbjct: 123 PRANDFDLMYRQLKAIKEGRAVAKPIYNHAT-GLLDPPELITPPKILVVEGLHPMYDERV 181
Query: 170 RDLMNMKIFVDTDADVRLTRRIRRDTIEKGRDIKTVLDQYSKFVKPAFEDFILPTKKYAD 229
R L++ I++D +D++ +I+RD E+G ++++ KP F+ +I P K+YAD
Sbjct: 182 RGLLDFSIYLDISSDIKFAWKIQRDMAERGHSLESIKASIEA-RKPDFDAYIDPQKQYAD 240
Query: 230 III 232
+I
Sbjct: 241 AVI 243
>Os02g0708200 Uridine kinase family protein
Length = 652
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 99/189 (52%), Gaps = 19/189 (10%)
Query: 50 HQEPFV-IGVAGGASSGKSTVCKMIIDQLRDQRVVVVTQESFYYGLSDEELVHVHDYNFD 108
H E + +GVAG + +GK+ + +++ + V V++ +++ + + D NFD
Sbjct: 61 HNEGMIFVGVAGPSGAGKTVFTEKVLNFMPG--VAVISMDNY------NDASRIVDGNFD 112
Query: 109 HPDAFDTELLLSCMENLKHGKAVDIPNYNFKT-----YKSVASARKVNPSDVIILEGILV 163
P D + LL + LK G++V +P Y+FK Y++V V S ++I+EGI
Sbjct: 113 DPRLTDYDTLLENIHGLKEGRSVQVPIYDFKMSCRTGYRTV----DVPSSRIVIIEGIYA 168
Query: 164 FHDSRVRDLMNMKIFVDTDADVRLTRRIRRDTIEKGRDIKTVLDQYSKFVKPAFEDFILP 223
+ ++R ++++++ V L +R+ RD G++ + ++ Q S+ V P ++ FI P
Sbjct: 169 LSE-KLRSVLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMYKAFIEP 227
Query: 224 TKKYADIII 232
+ A I I
Sbjct: 228 DLQTAHIKI 236
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.139 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,469,145
Number of extensions: 692090
Number of successful extensions: 1652
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 1645
Number of HSP's successfully gapped: 9
Length of query: 491
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 386
Effective length of database: 11,553,331
Effective search space: 4459585766
Effective search space used: 4459585766
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)