Os05g0455700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Uracil phosphoribosyl transferase family protein.
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Os05g0455700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Uracil phosphoribosyl transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 86.12 | 0.436 | 10.1 | -1.01 | 1.25 | -0.897 | 1.45 | -0.762 | -0.874 | 18 | 70 | 1416 | -- | -- |
| 87.62 | 0.436 | 10.1 | -1.08 | 1.25 | -0.924 | 1.41 | -- | -0.873 | 18 | 70 | 1401 | -- | -- |
| 91.23 | 0.445 | 10.1 | -1.03 | 1.25 | -0.888 | -- | -0.72 | -0.87 | 18.1 | 70.05 | 1415 | -- | -- |
| 92.43 | 0.448 | 10.1 | -1.13 | 1.25 | -0.913 | -- | -- | -0.91 | 18.1 | 70.38 | 1401 | -- | -- |
| 99.85 | 0.465 | 10.1 | -0.999 | -- | -1.51 | -- | -1.12 | -0.829 | -- | 73.01 | 578 | -- | -- |
| 123.44 | 0.521 | 10.1 | -0.918 | 1.21 | -- | 1.29 | -- | -0.77 | 18.2 | -- | -- | -- | -- |
| 127.51 | 0.529 | 10.1 | -0.932 | 1.21 | -- | -- | -- | -0.766 | 18.2 | -- | -- | -- | -- |
| 101.45 | 0.469 | 10.1 | -1.1 | -- | -1.58 | -- | -- | -0.861 | -- | 71.02 | 561 | -- | -- |
| 124.52 | 0.52 | 10.1 | -- | 1.29 | -0.805 | -- | -- | -0.799 | 18 | 72 | 1401 | -- | -- |
| 203.8 | 0.667 | 10.1 | -0.966 | -- | -- | -- | -- | -0.793 | -- | -- | -- | -- | -- |
| 150.41 | 0.574 | 10.1 | -- | 1.23 | -- | -- | -- | -0.662 | 18.2 | -- | -- | -- | -- |
| 132.73 | 0.537 | 10.1 | -- | -- | -1.46 | -- | -- | -0.732 | -- | 73.7 | 554 | -- | -- |
| 228.39 | 0.705 | 10.1 | -- | -- | -- | -- | -- | -0.686 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.23 | humidity | 70 | 1440 | > th | dose independent | rect. | 12 | 20 |
| 2 | 83.29 | humidity | 70 | 1440 | > th | dose independent | sin | 16 | NA |
| 6 | 83.45 | humidity | 70 | 1440 | > th | dose independent | rect. | 12 | 12 |
| 7 | 83.46 | humidity | 70 | 1440 | > th | dose independent | rect. | 12 | 9 |
| 10 | 83.46 | humidity | 70 | 1440 | > th | dose independent | rect. | 12 | 14 |
| 11 | 83.46 | humidity | 70 | 1440 | > th | dose independent | rect. | 12 | 16 |
| 35 | 83.93 | humidity | 70 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 99 | 84.95 | humidity | 70 | 1440 | < th | dose independent | rect. | 12 | 7 |
| 101 | 85.16 | humidity | 70 | 1440 | < th | dose independent | rect. | 12 | 19 |
| 114 | 85.20 | humidity | 50 | 1440 | > th | dose dependent | rect. | 10 | 11 |
| 119 | 85.34 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 154 | 85.50 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 157 | 85.51 | humidity | 90 | 1440 | < th | dose dependent | rect. | 10 | 11 |
| 159 | 85.52 | humidity | 70 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 172 | 85.56 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 6 |
| 181 | 85.61 | humidity | 70 | 1440 | < th | dose independent | sin | 17 | NA |
| 199 | 85.74 | humidity | 50 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 212 | 85.84 | humidity | 70 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 242 | 85.97 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 14 |
| 244 | 85.97 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 20 |
| 247 | 85.98 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 12 |
| 249 | 85.98 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 18 |
| 267 | 86.00 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 13 |
| 271 | 86.00 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 19 |
| 282 | 86.01 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 11 |
| 286 | 86.01 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 17 |
| 326 | 86.08 | temperature | 30 | 1440 | < th | dose independent | sin | 0 | NA |
| 453 | 86.27 | temperature | 30 | 1440 | > th | dose independent | sin | 23 | NA |
| 477 | 86.29 | humidity | 70 | 1440 | > th | dose independent | rect. | 5 | 19 |
| 482 | 86.30 | humidity | 70 | 1440 | > th | dose independent | rect. | 3 | 20 |
| 487 | 86.30 | humidity | 70 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 492 | 86.31 | humidity | 70 | 1440 | > th | dose independent | rect. | 5 | 15 |
| 496 | 86.31 | humidity | 70 | 1440 | > th | dose independent | rect. | 3 | 17 |
| 502 | 86.31 | humidity | 70 | 1440 | > th | dose independent | rect. | 1 | 20 |
| 518 | 86.32 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 546 | 86.32 | humidity | 70 | 1440 | > th | dose independent | rect. | 22 | 22 |
| 597 | 86.37 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 21 |
| 602 | 86.38 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 19 |
| 609 | 86.39 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 614 | 86.39 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 17 |
| 632 | 86.39 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 23 |
| 638 | 86.39 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 23 |
| 778 | 86.57 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 779 | 86.58 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 874 | 86.60 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 8 |
| 896 | 86.68 | humidity | 80 | 1440 | < th | dose dependent | sin | 18 | NA |
| 901 | 86.70 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 918 | 86.71 | humidity | 50 | 1440 | > th | dose dependent | sin | 20 | NA |
| 922 | 86.74 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 948 | 86.86 | humidity | 90 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 954 | 86.89 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 23 |