BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0131300 Os11g0131300|Os11g0131300
(389 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0131300 761 0.0
Os12g0128000 Cyclin-like F-box domain containing protein 659 0.0
Os10g0124500 Cyclin-like F-box domain containing protein 211 7e-55
Os10g0391200 Cyclin-like F-box domain containing protein 190 2e-48
Os04g0194000 Cyclin-like F-box domain containing protein 158 8e-39
Os04g0193300 Cyclin-like F-box domain containing protein 152 3e-37
Os04g0191800 Cyclin-like F-box domain containing protein 143 2e-34
Os02g0543200 Cyclin-like F-box domain containing protein 136 3e-32
Os04g0195100 Cyclin-like F-box domain containing protein 134 1e-31
Os04g0191600 F-box associated type 1 domain containing protein 108 6e-24
>Os11g0131300
Length = 389
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/389 (95%), Positives = 370/389 (95%)
Query: 1 MVRLPEQQRRRPLTIANXXXXXXXXXXXXXXXXXXXQCRAVCKVWRDVTSDRAFLLPHHC 60
MVRLPEQQRRRPLTIAN QCRAVCKVWRDVTSDRAFLLPHHC
Sbjct: 1 MVRLPEQQRRRPLTIANLPEEILSEILLLLPPKSILQCRAVCKVWRDVTSDRAFLLPHHC 60
Query: 61 RQPPQRLLTFIRDVGSRHDDLDILDYCVEAVDFRTHQFQSLARFTGQDYDCSLEDSPFTV 120
RQPPQRLLTFIRDVGSRHDDLDILDYCVEAVDFRTHQFQSLARFTGQDYDCSLEDSPFTV
Sbjct: 61 RQPPQRLLTFIRDVGSRHDDLDILDYCVEAVDFRTHQFQSLARFTGQDYDCSLEDSPFTV 120
Query: 121 HASCDGLLLMSYNNYLHLCNPTTRQWLWVFPPALQHDTVLGLYSHGHSSEYRVLYYREIG 180
HASCDGLLLMSYNNYLHLCNPTTRQWLWVFPPALQHDTVLGLYSHGHSSEYRVLYYREIG
Sbjct: 121 HASCDGLLLMSYNNYLHLCNPTTRQWLWVFPPALQHDTVLGLYSHGHSSEYRVLYYREIG 180
Query: 181 LGPEFYISIVGSGKERSIWPHSSSASLRKWLAKGKEETQFNEPFLFHGNLHWLPHLGGQN 240
LGPEFYISIVGSGKERSIWPHSSSASLRKWLAKGKEETQFNEPFLFHGNLHWLPHLGGQN
Sbjct: 181 LGPEFYISIVGSGKERSIWPHSSSASLRKWLAKGKEETQFNEPFLFHGNLHWLPHLGGQN 240
Query: 241 KIVVFDTLDEVFRWLHVPFKMHNMSSLLEIEGSLAMSNSHIGSSKVDLWLLQDYKHMVWV 300
KIVVFDTLDEVFRWLHVPFKMHNMSSLLEIEGSLAMSNSHIGSSKVDLWLLQDYKHMVWV
Sbjct: 241 KIVVFDTLDEVFRWLHVPFKMHNMSSLLEIEGSLAMSNSHIGSSKVDLWLLQDYKHMVWV 300
Query: 301 HKYRIELPVIEIRRFEEDDGWYLHIVSQEGDVLVDGFDWQFHYDIKGNLLEKFQCSGRML 360
HKYRIELPVIEIRRFEEDDGWYLHIVSQEGDVLVDGFDWQFHYDIKGNLLEKFQCSGRML
Sbjct: 301 HKYRIELPVIEIRRFEEDDGWYLHIVSQEGDVLVDGFDWQFHYDIKGNLLEKFQCSGRML 360
Query: 361 NITPHILQESLVPHEEPSYQLDVIYGGTE 389
NITPHILQESLVPHEEPSYQLDVIYGGTE
Sbjct: 361 NITPHILQESLVPHEEPSYQLDVIYGGTE 389
>Os12g0128000 Cyclin-like F-box domain containing protein
Length = 399
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/374 (85%), Positives = 330/374 (88%)
Query: 2 VRLPEQQRRRPLTIANXXXXXXXXXXXXXXXXXXXQCRAVCKVWRDVTSDRAFLLPHHCR 61
VRLPEQQRRRPLTIA+ QCRAVCK WRDVTSDRAFLL HH R
Sbjct: 7 VRLPEQQRRRPLTIASLPEEIMSEILLLLPPKSILQCRAVCKAWRDVTSDRAFLLTHHRR 66
Query: 62 QPPQRLLTFIRDVGSRHDDLDILDYCVEAVDFRTHQFQSLARFTGQDYDCSLEDSPFTVH 121
QPPQRLLTFIRDVGS HDDLDILDYCVEAVDFRTHQFQSLARFTGQDYDCSLEDSPFTVH
Sbjct: 67 QPPQRLLTFIRDVGSHHDDLDILDYCVEAVDFRTHQFQSLARFTGQDYDCSLEDSPFTVH 126
Query: 122 ASCDGLLLMSYNNYLHLCNPTTRQWLWVFPPALQHDTVLGLYSHGHSSEYRVLYYREIGL 181
ASCDGLLLMSYNNYLHLCNPTTRQWLWV PPALQHD V+GLY+HGH SEYRVLYYRE GL
Sbjct: 127 ASCDGLLLMSYNNYLHLCNPTTRQWLWVSPPALQHDKVVGLYAHGHPSEYRVLYYREFGL 186
Query: 182 GPEFYISIVGSGKERSIWPHSSSASLRKWLAKGKEETQFNEPFLFHGNLHWLPHLGGQNK 241
G FYI+ VGS KER IWPHSSS SLRKWL KG E+T+FN+PFLFHGNLHWLP G QNK
Sbjct: 187 GRTFYITTVGSRKERRIWPHSSSESLRKWLTKGTEDTEFNKPFLFHGNLHWLPQSGRQNK 246
Query: 242 IVVFDTLDEVFRWLHVPFKMHNMSSLLEIEGSLAMSNSHIGSSKVDLWLLQDYKHMVWVH 301
IVVFDTLDE FRWLHVPFKMHN+SSLLEIEGSLAMSNSHIGSSKVDLWLLQDYKHMVWVH
Sbjct: 247 IVVFDTLDEAFRWLHVPFKMHNVSSLLEIEGSLAMSNSHIGSSKVDLWLLQDYKHMVWVH 306
Query: 302 KYRIELPVIEIRRFEEDDGWYLHIVSQEGDVLVDGFDWQFHYDIKGNLLEKFQCSGRMLN 361
KYRIELPVIEIRR EDD W+LHIVSQEGDVLVDG WQFHYD+KGNLLEKFQCSGRMLN
Sbjct: 307 KYRIELPVIEIRRLVEDDVWFLHIVSQEGDVLVDGSYWQFHYDMKGNLLEKFQCSGRMLN 366
Query: 362 ITPHILQESLVPHE 375
ITPHILQESLVPHE
Sbjct: 367 ITPHILQESLVPHE 380
>Os10g0124500 Cyclin-like F-box domain containing protein
Length = 457
Score = 211 bits (537), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 134/351 (38%), Positives = 188/351 (53%), Gaps = 35/351 (9%)
Query: 38 CRAVCKVWRDVTSDRAFLLPHHCRQPPQRLLTFIRDVGSRHDDLDILDYCVEAVDFRTHQ 97
CRAVC+ WR + S AFLL HH RQP L+T R+ + C++A+ R+ +
Sbjct: 119 CRAVCRSWRHIASTHAFLLRHHRRQPEFPLVTSFRNPAPADQ---WMPNCLDAILLRSAE 175
Query: 98 FQSLARFTGQDYDCSLEDSPFTVHASCDGLLLMSYNNYLHLCNPTTRQWL----WVFPPA 153
+ + F+ C F + ASCDGLL++ ++CNPTTRQ W
Sbjct: 176 RRPI--FSFPRPFCGG----FPITASCDGLLIVGG----YICNPTTRQRAPISRWTI--- 222
Query: 154 LQHDTVLGLYSHGHSSEYRVLYYREIGLGPEFYISI------VGSGKERSIWPHSSSASL 207
D ++GLY H S EYRVLY+ E Y I VGS K R I S +
Sbjct: 223 ---DNIVGLYRHEPSGEYRVLYFASSDTPSEVYCPICYCVLAVGSNKPRQI--PCSVTPM 277
Query: 208 RKWLAKGKEETQFNEPFLFHGNLH--WLPHLGGQ-NKIVVFDTLDEVFRWLHVP-FKMHN 263
+ + F P L HGNLH W G + N+I+VF+T+ E FR L P N
Sbjct: 278 DEEIIGAPGPMIFGRPVLIHGNLHLHWKKRRGTRYNRILVFNTVAESFRQLRPPAVNPRN 337
Query: 264 MSSLLEIEGSLAMSNSHIGSSKVDLWLLQDYKHMVWVHKYRIELPVIEIRRFEEDDGWYL 323
+ LL ++G LAMS S + +++L+DY H VWV +Y+I+LP +EIRRF++ W+
Sbjct: 338 YTRLLAMDGMLAMSVSKERVMDMSIFMLEDYDHEVWVFRYKIKLPTMEIRRFQDQGDWWA 397
Query: 324 HIVSQEGDVLVDGFDWQFHYDIKGNLLEKFQCSGRMLNITPHILQESLVPH 374
+VS+EGD+LV F W H D KGNL+ KFQ + + I+PH ++ESL+ H
Sbjct: 398 EVVSEEGDILVSCFGWLLHCDNKGNLVSKFQYNDDLPAISPHRIKESLIQH 448
>Os10g0391200 Cyclin-like F-box domain containing protein
Length = 492
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/352 (38%), Positives = 183/352 (51%), Gaps = 31/352 (8%)
Query: 37 QCRAVCKVWRDVTSDRAFLLPHHCRQPPQRLLTFIRDVGSRHDDLDILDYCVEAVDFRTH 96
+CRAVC WR +TSD AFL HH RQ L+ F R R V A+D
Sbjct: 165 RCRAVCTAWRRLTSDPAFLRAHHHRQRDLPLIYFRRGGSDR----------VGAIDLHAA 214
Query: 97 QFQSLARFTGQDYDCSLEDSPFTVHASCDGLLLMSYNNYLHLCNPTTRQWLWVFPPALQH 156
Q + + T +TV ASCDGLLL+S + ++CNP T W + P L
Sbjct: 215 QLRPVVDHTWPPLG-------YTVIASCDGLLLLSSGRF-YICNPATNHWAEI--PQLVD 264
Query: 157 DTVLGLYSHGHSSEYRVLYYREIGLGPEFY-ISIVGSGKERSIWPHSSSASLRKWLAKG- 214
LGLY H S EYRVLY G Y I +GS + R I S ++ + LA+
Sbjct: 265 ADFLGLYPHNPSGEYRVLYGEFHGEEECVYHILTLGSDEPRCITMTMGSETVEQPLAREF 324
Query: 215 KEETQFNEPFLFHGNLHW-LPHLGGQNKIVVFDTLDEVFRWLHVPFKMHNMSSLLEIEGS 273
+ + L GNLHW L H G KI+VFDT E F+W+ P + SLLE++ +
Sbjct: 325 LMHARGDRSVLVRGNLHWYLRHRDGGCKIMVFDTASESFQWMRHP-AIPGWVSLLEMDST 383
Query: 274 LAMSNSHIGSSKVDLWLLQDYKHMVWVHKYRIELPVIEIRRFEEDD----GWYLHIVSQE 329
L S ++++DLW+LQDY+ W K+RIELP+ +IR+F E + GW +VS E
Sbjct: 384 LVFSAVEC-TTRIDLWVLQDYERSTWACKHRIELPMAQIRQFPECNLEHLGWSAMVVSVE 442
Query: 330 GDVLVDGFDWQFHYDIKGNLLEKFQCSGRMLNITPHILQESLVPHEEPSYQL 381
GDVLV + H D KGN+L FQ G++ H L+E+LV H P +Q+
Sbjct: 443 GDVLVRCSNRILHCDRKGNVLASFQFDGQLPMNCLHRLKENLVVH--PFFQM 492
>Os04g0194000 Cyclin-like F-box domain containing protein
Length = 370
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 179/347 (51%), Gaps = 36/347 (10%)
Query: 37 QCRAVCKVWRDVTSDRAFLLPHHCRQPPQRLLTFIRDVGSRHDDLDILD-YCVEAVDFRT 95
+CR VC+ WR +TS R FLL HH QP L+ VG D +LD ++ D
Sbjct: 34 RCRLVCRAWRRLTSTRGFLLAHHRHQPSLPLV-----VGYGCDGGSLLDILTLDRRDAAR 88
Query: 96 HQFQSLARFTGQDYDCSLEDSPFTVHASCDGLLLMSYNN----YLHLCNPTTRQWLWVFP 151
+ + R L+++ V ASCDG+L+++ N Y +CNPTTRQ+ +
Sbjct: 89 PRLHPVVR---------LKNAAHFVSASCDGILILNMTNCGEFYYSVCNPTTRQFADL-- 137
Query: 152 PALQHDTVLGLYSHGHSSEYRVLYYREIGLGPEFYISIVGSGKERSIWPHS-SSASLRKW 210
P L V+G Y H + EYR+L Y + PE GS + + ++ S+ + +
Sbjct: 138 PMLTGFFVMGFYQHRPTGEYRLLLYYQ--FRPE------GSEDRYACYVYTLGSSEMPRC 189
Query: 211 LAKGKEETQFNEPFLFHGNLHWLPHLGGQNKIVVFDTLDEVFRWLHVPFKMHNMSSLLEI 270
+ +E L HG+LHW + +KI++F+T E F + KM N + L EI
Sbjct: 190 IGWMEEVATCTAVVLLHGSLHWYNY--KTDKILIFNTASESFWSMRQADKM-NGNDLFEI 246
Query: 271 EGSLAMSNSHIGSSKVDLWLLQDYKHMVWVHKYRIELPVIEIR-RFEEDDGWYLHIVSQE 329
+G+L + + ++ VD+W+LQDYK W K+RIELPV +I+ + ++ D W ++S++
Sbjct: 247 DGTLGIYFCNDDATIVDIWVLQDYKTEFWSLKHRIELPVPDIKGKLDDGDDWSAMVLSED 306
Query: 330 GDVLVDGF--DWQFHYDIKGNLLEKFQCSGRMLNITPHILQESLVPH 374
GDVLV + W + G LL FQ TP L++SLVPH
Sbjct: 307 GDVLVLVYYRQWLLYIGTDGKLLASFQHDVGCHYNTPLKLKQSLVPH 353
>Os04g0193300 Cyclin-like F-box domain containing protein
Length = 405
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 170/348 (48%), Gaps = 32/348 (9%)
Query: 37 QCRAVCKVWRDVTSDRAFLLPHHCRQPPQRLLTFIRDVGSRHDDLDILDYCVEAVDFRTH 96
+CR VC+ WR +TS FLL HH QP L+ R+ + + ++D R
Sbjct: 63 RCRQVCRAWRRLTSTGDFLLTHHRHQPTLPLV-------DRYKCNEEFLLGIVSLDRRAA 115
Query: 97 --QFQSLARFTGQDYDCSLEDSPFTVHASCDGLLLMSYNN-YLHLCNPTTRQWLWVFPPA 153
+ Q +A+ D C + + ASCDGLLL+S + +CNP TRQ+ +
Sbjct: 116 AARLQPVAQL---DDTCYM----MSADASCDGLLLLSIGGIWWFICNPITRQFGALH--L 166
Query: 154 LQHDTVLGLYSHGHSSEYRVLYYREIGLGPEFYISIVGSGKERSIWPHSSSASLRKWLAK 213
L V+G Y H + +YR+L YR L E I G + + ++ +S
Sbjct: 167 LCGFMVMGFYKHPPTGDYRLLLYRNQELMSEHLIP----GDRNTCYVYTLGSSDVPRCIG 222
Query: 214 GKEETQFNEPFLFHGNLHWLPHLGGQNKIVVFDTLDEVFRWLHVPFKMHNMS----SLLE 269
E + + H +LHW + Q+ I+VFDT E FRW+ P + +L +
Sbjct: 223 WPETSASGATVVLHCSLHW--YQRSQDMILVFDTTAESFRWMRAPSDRMKCTLDSGNLFD 280
Query: 270 IEGSLAMSNSHIGSSKVDLWLLQDYKHMVWVHKYRIELPVIEIRRFEEDD-GWYLHIVSQ 328
++G L M S+ G + VD+W+LQDYK +W KY++ELPV EIR W ++SQ
Sbjct: 281 MDGKLGMYCSNDGCTIVDIWVLQDYKREIWSLKYQVELPVPEIRGMLGGAYHWSAMVLSQ 340
Query: 329 EGD--VLVDGFDWQFHYDIKGNLLEKFQCSGRMLNITPHILQESLVPH 374
EGD VLV W F+ D +GNLL FQ G L L+ SLV H
Sbjct: 341 EGDVLVLVSCDRWLFYIDTEGNLLASFQHYGDGLFTIGLKLKPSLVQH 388
>Os04g0191800 Cyclin-like F-box domain containing protein
Length = 400
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 173/368 (47%), Gaps = 52/368 (14%)
Query: 37 QCRAVCKVWRDVTSDRAFLLPHHCRQPPQRLLTFIRDVGSRHDDLDILDYCVEAVDFRTH 96
+CR VC+ WR +TS R FLL HH QP L+ D +D+L +
Sbjct: 38 RCRLVCRAWRRLTSTRDFLLAHHRHQPSLPLIAAC-DYADIMYLIDVLTLTLGRRRGAAA 96
Query: 97 QFQSLARFTG-QDYDCSLEDSPFTVHASCDGLLLMSYNN---YLHLCNPTTRQWLWVFPP 152
+ +AR+ DY + +SCDGLLL+S N +CNPTTRQ+ + P
Sbjct: 97 RLHPVARYASTADY----------LDSSCDGLLLISRNTGPPQYSICNPTTRQFGDL--P 144
Query: 153 ALQHDTVLGLYSHGHSSEYRVLYYREIGLGPE-----------FYISIVGSGK--ERSIW 199
+ LGLY H + +YR+L YR + E Y+ +GS R W
Sbjct: 145 LISGFMFLGLYQHSPTGDYRILLYRAEKVVLEDLIPGHVERDASYVYTLGSNDMPRRIGW 204
Query: 200 PHSSSASLRKWLAKGKEETQFNEPFLFHGNL-HWLPHLGGQNKIVVFDTLDEVFRWLHVP 258
+ L ++ P HG+L HW + ++ I+VFDT E FRW+ P
Sbjct: 205 AEPEVSML-------AGHSRRCRPAQLHGSLLHWYHSI--KHMILVFDTTAESFRWMRAP 255
Query: 259 F-KMHNM------SSLLEIEGSLAMSNSHIGSSKVDLWLLQDYKHMVWVHKYRIELPVIE 311
K N + +LE++ +L + + + V++W LQDY+ VW KY++ELPV
Sbjct: 256 IDKTENELNRELWADVLEMDSTLGLYCCNHDKTIVNIWALQDYEQEVWSIKYQVELPVTC 315
Query: 312 IR-RFEEDDGWYLHIVSQEGD----VLVDGFDWQFHYDIKGNLLEKFQCSGRMLNITPHI 366
IR + D W + + S++GD VLVD +D G LL + + G + +T
Sbjct: 316 IRGELDVGDSWSVMVSSEDGDEVVVVLVDCGQSVLCFDTDGKLLARLEHDGNDIMVTRMK 375
Query: 367 LQESLVPH 374
L++SLVPH
Sbjct: 376 LKQSLVPH 383
>Os02g0543200 Cyclin-like F-box domain containing protein
Length = 493
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 176/370 (47%), Gaps = 29/370 (7%)
Query: 37 QCRAVCKVWRDVTSDRAFLLPH--HCRQPPQRLLTFIRDVGSRHDDLDILDYCVEAVDFR 94
+C VC+ RD+ + +F H H + P L + D + D + + + AVD
Sbjct: 125 RCSGVCRRLRDLIATDSFRRGHQRHRSRHPMPLFFYRLDHWAFPDRVRVH---LRAVDVA 181
Query: 95 THQFQSLARFTGQDYDC-SLEDSPFTVHASCDGLLLMSYNNYLHLCNPTTRQWLWVFPPA 153
+ + F+ D D S + FT+ SCDG+LL+SY+ L+ CNP+TR+W + PP
Sbjct: 182 ARETHPVICFSHADADLRSADPRVFTIEGSCDGILLLSYHTRLYACNPSTRRWRRL-PPL 240
Query: 154 LQHDTVLGLYSHG--HSSEYRVLYY--REIGLGPEFYISIVGSGKERSIWPHSSSASLRK 209
++G Y HG EYRVLY+ R F +S R I + ++R
Sbjct: 241 HDDHVIVGFYGHGAIDEREYRVLYHTARPGCRYWVFSLSFFPDQPPRDIGRPADLEAVRA 300
Query: 210 WLAKGKEETQFNEPFLFHGNLHWLPHLGGQNKIVVFDTLDEVFRWLHVPFKMHNM----- 264
LA+G + P LHW N ++VFDT+ E F W+ P +
Sbjct: 301 VLAEGISPSYEMPPVAIAHRLHWRAQAASLN-VLVFDTVAESFGWIPPPNQQEGNQMIPV 359
Query: 265 --SSLLEIEGSLAMSNSHIGSSKVDLWLLQDYKHMVWVHKYRIELPVIEIRRFE--EDDG 320
LLEI G LAM + + + VD+W+LQ+ + W H Y+I LPV + F +D+G
Sbjct: 360 EGDQLLEINGRLAM--TLVSQTTVDVWVLQEGE--AWEHHYQISLPVDLLNVFGGYDDEG 415
Query: 321 WY---LHIVSQEGDVLVDGFDWQFHYDIKGNLLEKFQCSGRMLNITPHILQESLVPHE-E 376
+ + VSQE +VL D +GN+L + +G + ++ ++LQESL+ H
Sbjct: 416 FVSAAVFAVSQERNVLAQCPAMMLQCDTEGNVLMFYSLAGHLTVLSRYMLQESLLAHAFL 475
Query: 377 PSYQLDVIYG 386
P Q D I G
Sbjct: 476 PMRQEDAIDG 485
>Os04g0195100 Cyclin-like F-box domain containing protein
Length = 382
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 162/345 (46%), Gaps = 24/345 (6%)
Query: 37 QCRAVCKVWRDVTSDRAFLLPHHCRQPPQRLLTFIRDVGSRHDDLDILDYCVEAVDFRTH 96
+C AVC+ WR + + FLL HH QPP+ L+ R D V++VD H
Sbjct: 35 RCHAVCRDWRRLATSADFLLAHHRHQPPRPLV--FGCARWRSGAAADADAAVDSVDLIRH 92
Query: 97 QFQSLARFTGQDYDCSLEDSPFTVHASCDGLLLMSYNNYLHLCNPTTRQWLWVFPPALQH 156
+ DY + F +H+SCDGLLL ++CNP TRQ V P
Sbjct: 93 PAERRRVLGFSDYR---QHQSFKIHSSCDGLLLFVSGRAFYICNPATRQVTPV-PALTGG 148
Query: 157 DTVLGLYSHGHSS--EYRVLYYREIGLGPEFY--ISIVGSGKERSIWPHSSSASLRKWLA 212
+ + LY H S EYRVL ++ P+ +++ S K R I + W+
Sbjct: 149 GSQVTLYPHPSSGDGEYRVLKWKY----PDAVCILAVGSSEKPRRIGLPEAFLPPVFWI- 203
Query: 213 KGKEETQFNEPFLFHGNLHWLPHL-GGQNKIVVFDTLDEVFRWLHVPFKMHNMSSLLEIE 271
+E F P L HG LHW HL ++ I+VFDT+ E FRW+ P + L+EI+
Sbjct: 204 ---DEIGFLPPVLLHGCLHW--HLRKPEDAILVFDTVAESFRWMVSPNVDGYGAHLVEID 258
Query: 272 GSLAMSNSHIGSSKVDLWLLQDYKHMVWVHKYRIELPVIEIRRFEEDDGWYLHIVSQEGD 331
G + + + LW+LQDY+ VW +Y ++LPV +R + + IV G+
Sbjct: 259 GGM-LGIGIVTQGMAKLWVLQDYETEVWSLRYHVKLPVARMRSIAREGFFSWKIVCHRGE 317
Query: 332 VLV--DGFDWQFHYDIKGNLLEKFQCSGRMLNITPHILQESLVPH 374
+LV + F D KGNL EK + H L+ESLV H
Sbjct: 318 ILVYIQSSVFLFLCDTKGNLREKIHLDNMLPCAMRHCLKESLVNH 362
>Os04g0191600 F-box associated type 1 domain containing protein
Length = 239
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 118/239 (49%), Gaps = 13/239 (5%)
Query: 159 VLGLYSHGHSSEYRVLYYREIGLGPEFYISIVGSGKERSIWPHS-SSASLRKWLAKGKEE 217
++GLY H + EYR+L YR E + ++ G + + ++ S L + + + E
Sbjct: 2 LMGLYWHRPTGEYRLLLYRIELPASERLVDVLIPGDRNACYVYTLGSGDLPRCIGWPEAE 61
Query: 218 TQFNEPFLFHGNLHWLPHLGGQNKIVVFDTLDEVFRWLHVPFKM---HNMSSLLEIEGSL 274
L HG+LHW + ++ I+ FD E FRW+ PF L EI L
Sbjct: 62 AN-GASVLLHGSLHWYKRI--EDMILAFDITAESFRWMRSPFGKAVWRAFHGLFEINCML 118
Query: 275 AMSNSHIGSSKVDLWLLQDYKHMVWVHKYRIELPVIEIRRFEED---DGWYLHIVSQEGD 331
M G++ VD+W+L+DY+ VW KYR+ELPV+EIRR E D D + + + S++GD
Sbjct: 119 GMYCCDDGATFVDIWVLEDYEREVWSLKYRVELPVLEIRR-ELDVKRDLYSVMVSSEDGD 177
Query: 332 --VLVDGFDWQFHYDIKGNLLEKFQCSGRMLNITPHILQESLVPHEEPSYQLDVIYGGT 388
VLV+ + G LL L+ITP L+ SLVPH LD + +
Sbjct: 178 VLVLVNCKRAMLYIGTDGKLLASLPHDNDGLSITPVKLRASLVPHAFFPSLLDYVVNAS 236
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.140 0.458
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,261,694
Number of extensions: 599910
Number of successful extensions: 1489
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 1451
Number of HSP's successfully gapped: 12
Length of query: 389
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 286
Effective length of database: 11,657,759
Effective search space: 3334119074
Effective search space used: 3334119074
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 157 (65.1 bits)