BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0437600 Os10g0437600|AF383878
(749 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0437600 Similar to Starch synthase II, chloroplast pre... 1467 0.0
Os02g0744700 Similar to Starch synthase isoform zSTSII-2 (E... 807 0.0
AK072339 788 0.0
Os06g0229800 Similar to Starch synthase IIA 788 0.0
Os06g0160700 Similar to Starch synthase I, chloroplast prec... 462 e-130
Os07g0412100 Similar to Granule-bound starch synthase Ib, c... 322 5e-88
Os06g0133000 Granule-bound starch synthase I, chloroplast p... 307 2e-83
Os01g0720600 Starch synthase IVa (Glycogen (Starch) synthas... 207 2e-53
Os05g0533600 Similar to Starch synthase IVa (Glycogen (Star... 206 4e-53
Os04g0624600 Similar to Starch synthase DULL1 (Fragment) 192 8e-49
Os10g0207650 103 5e-22
>Os10g0437600 Similar to Starch synthase II, chloroplast precursor (EC 2.4.1.21)
(SS II) (GBSSII) (Granule-bound starch synthase II)
Length = 749
Score = 1467 bits (3799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 711/738 (96%), Positives = 711/738 (96%)
Query: 12 PSGSCYSPGCHSCWXXXXXXXXXXXXXXXXXXXXXXXXXXXVPRRSRLEWGRVEAQNSGA 71
PSGSCYSPGCHSCW VPRRSRLEWGRVEAQNSGA
Sbjct: 12 PSGSCYSPGCHSCWGPGPGGGRRLPSPRRRPITAAARPTWAVPRRSRLEWGRVEAQNSGA 71
Query: 72 RTSCRAALQWLSSTARSHVNVGYGSPLVFPGLTKPGSSRCLCVVGMVGNAGNQVGDDSDD 131
RTSCRAALQWLSSTARSHVNVGYGSPLVFPGLTKPGSSRCLCVVGMVGNAGNQVGDDSDD
Sbjct: 72 RTSCRAALQWLSSTARSHVNVGYGSPLVFPGLTKPGSSRCLCVVGMVGNAGNQVGDDSDD 131
Query: 132 GIKVTNEKLRAVIRKSKEVLEIHRNLLEKISASERKKITSIIEDSSIYNEQDPFGQRDSS 191
GIKVTNEKLRAVIRKSKEVLEIHRNLLEKISASERKKITSIIEDSSIYNEQDPFGQRDSS
Sbjct: 132 GIKVTNEKLRAVIRKSKEVLEIHRNLLEKISASERKKITSIIEDSSIYNEQDPFGQRDSS 191
Query: 192 FYHLDEVPDDDEFSYDLQMYLDRRPDQSEVVATQDYEAQLSQISEMGQSVAEGTSDDPSA 251
FYHLDEVPDDDEFSYDLQMYLDRRPDQSEVVATQDYEAQLSQISEMGQSVAEGTSDDPSA
Sbjct: 192 FYHLDEVPDDDEFSYDLQMYLDRRPDQSEVVATQDYEAQLSQISEMGQSVAEGTSDDPSA 251
Query: 252 SAAVDLINIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPMYKNYAEPQQLG 311
SAAVDLINIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPMYKNYAEPQQLG
Sbjct: 252 SAAVDLINIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPMYKNYAEPQQLG 311
Query: 312 EPRRYQVAGQDMEVIYYHAYIDGVDFVFIDNPIFHHVENDIYGGDRTDILKRMVLLCKAA 371
EPRRYQVAGQDMEVIYYHAYIDGVDFVFIDNPIFHHVENDIYGGDRTDILKRMVLLCKAA
Sbjct: 312 EPRRYQVAGQDMEVIYYHAYIDGVDFVFIDNPIFHHVENDIYGGDRTDILKRMVLLCKAA 371
Query: 372 IEVPWYVPCGGYCYGDGNLVFLANDWHTALLPVYLKAYYHDNGFMIYARSVLVIHNIAHQ 431
IEVPWYVPCGGYCYGDGNLVFLANDWHTALLPVYLKAYYHDNGFMIYARSVLVIHNIAHQ
Sbjct: 372 IEVPWYVPCGGYCYGDGNLVFLANDWHTALLPVYLKAYYHDNGFMIYARSVLVIHNIAHQ 431
Query: 432 GRGPLDDFSYLDLPVDYMDLFKLYDPFGGDHLNIFAAGIKAADRLLTVSHGYAWELKTAE 491
GRGPLDDFSYLDLPVDYMDLFKLYDPFGGDHLNIFAAGIKAADRLLTVSHGYAWELKTAE
Sbjct: 432 GRGPLDDFSYLDLPVDYMDLFKLYDPFGGDHLNIFAAGIKAADRLLTVSHGYAWELKTAE 491
Query: 492 GGWGLHGIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAAL 551
GGWGLHGIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAAL
Sbjct: 492 GGWGLHGIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAAL 551
Query: 552 QKELGLPVRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTGRQDLEDTLRR 611
QKELGLPVRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTGRQDLEDTLRR
Sbjct: 552 QKELGLPVRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTGRQDLEDTLRR 611
Query: 612 LESQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGG 671
LESQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGG
Sbjct: 612 LESQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGG 671
Query: 672 LRDTVEHYNPYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRTSWEGLQKRGMMQDLSW 731
LRDTVEHYNPYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRTSWEGLQKRGMMQDLSW
Sbjct: 672 LRDTVEHYNPYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRTSWEGLQKRGMMQDLSW 731
Query: 732 DNAAKLYEEVLLAAKYQW 749
DNAAKLYEEVLLAAKYQW
Sbjct: 732 DNAAKLYEEVLLAAKYQW 749
>Os02g0744700 Similar to Starch synthase isoform zSTSII-2 (EC 2.4.1.21)
Length = 677
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/552 (67%), Positives = 452/552 (81%), Gaps = 5/552 (0%)
Query: 200 DDDEFSYDLQMYLDRRPDQSEVVATQDYEAQLSQISEMGQSVAEGTSDDPSAS--AAVDL 257
D + + + + LD++ D V + EA+ + G + S++ + A ++
Sbjct: 129 DGNAQAVESKAALDKKED---VGVAEPLEAKADAGGDAGAVSSADDSENKESGPLAGPNV 185
Query: 258 INIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPMYKNYAEPQQLGEPRRYQ 317
+N+I+VA+EC+P+ KTGGLGDV GALPKALARRGHRVMVV+P Y YAE + LG +RY+
Sbjct: 186 MNVIVVASECSPFCKTGGLGDVVGALPKALARRGHRVMVVIPRYGEYAEAKDLGVRKRYR 245
Query: 318 VAGQDMEVIYYHAYIDGVDFVFIDNPIFHHVENDIYGGDRTDILKRMVLLCKAAIEVPWY 377
VAGQD EV Y+HA+IDGVDFVF++ P F H NDIYGG+R D+LKRM+L CKAA+EVPW+
Sbjct: 246 VAGQDSEVSYFHAFIDGVDFVFLEAPPFRHRHNDIYGGERFDVLKRMILFCKAAVEVPWF 305
Query: 378 VPCGGYCYGDGNLVFLANDWHTALLPVYLKAYYHDNGFMIYARSVLVIHNIAHQGRGPLD 437
PCGG YGDGNLVF+ANDWHTALLPVYLKAYY DNG M Y RSVLVIHNIAHQGRGP+D
Sbjct: 306 APCGGSIYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSVLVIHNIAHQGRGPVD 365
Query: 438 DFSYLDLPVDYMDLFKLYDPFGGDHLNIFAAGIKAADRLLTVSHGYAWELKTAEGGWGLH 497
DF+ +DLP Y+D F+LYDP GG+H N+FAAG+K ADR +TVSHGY WE+KT +GGWGLH
Sbjct: 366 DFATMDLPEHYIDHFRLYDPVGGEHSNVFAAGLKMADRAVTVSHGYLWEIKTMDGGWGLH 425
Query: 498 GIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELGL 557
IIN +DWK QGIVNGID +WNP D HL+SDGY NY+ ET+ GK+QCK ALQ++LGL
Sbjct: 426 EIINHNDWKLQGIVNGIDMAEWNPEVDEHLQSDGYANYTFETLDTGKKQCKEALQRQLGL 485
Query: 558 PVRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTGRQDLEDTLRRLESQHY 617
VR DVP+I FIGRLDHQKGVD+I +AMPWIAGQDVQ++MLGTGR DLE+ LRR ES+H
Sbjct: 486 QVRDDVPLIGFIGRLDHQKGVDIIGDAMPWIAGQDVQVVMLGTGRPDLEEMLRRFESEHN 545
Query: 618 DRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGGLRDTVE 677
D+VRGWVGFS++LAHR+TAGAD+LLMPSRFEPCGLNQLYAM YGTVPVVHAVGGLRDTV
Sbjct: 546 DKVRGWVGFSVQLAHRITAGADVLLMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTVA 605
Query: 678 HYNPYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRTSWEGLQKRGMMQDLSWDNAAKL 737
++P+ ++GLGWTF++AEANR+IDALGHCLNTYRNY+ SW GLQ RGM QDLSWD+AA+L
Sbjct: 606 PFDPFADTGLGWTFDRAEANRMIDALGHCLNTYRNYKESWRGLQARGMAQDLSWDHAAEL 665
Query: 738 YEEVLLAAKYQW 749
YE+VL+ AKYQW
Sbjct: 666 YEDVLVKAKYQW 677
>AK072339
Length = 376
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/376 (100%), Positives = 376/376 (100%)
Query: 374 VPWYVPCGGYCYGDGNLVFLANDWHTALLPVYLKAYYHDNGFMIYARSVLVIHNIAHQGR 433
VPWYVPCGGYCYGDGNLVFLANDWHTALLPVYLKAYYHDNGFMIYARSVLVIHNIAHQGR
Sbjct: 1 VPWYVPCGGYCYGDGNLVFLANDWHTALLPVYLKAYYHDNGFMIYARSVLVIHNIAHQGR 60
Query: 434 GPLDDFSYLDLPVDYMDLFKLYDPFGGDHLNIFAAGIKAADRLLTVSHGYAWELKTAEGG 493
GPLDDFSYLDLPVDYMDLFKLYDPFGGDHLNIFAAGIKAADRLLTVSHGYAWELKTAEGG
Sbjct: 61 GPLDDFSYLDLPVDYMDLFKLYDPFGGDHLNIFAAGIKAADRLLTVSHGYAWELKTAEGG 120
Query: 494 WGLHGIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQK 553
WGLHGIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQK
Sbjct: 121 WGLHGIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQK 180
Query: 554 ELGLPVRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTGRQDLEDTLRRLE 613
ELGLPVRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTGRQDLEDTLRRLE
Sbjct: 181 ELGLPVRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTGRQDLEDTLRRLE 240
Query: 614 SQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGGLR 673
SQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGGLR
Sbjct: 241 SQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGGLR 300
Query: 674 DTVEHYNPYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRTSWEGLQKRGMMQDLSWDN 733
DTVEHYNPYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRTSWEGLQKRGMMQDLSWDN
Sbjct: 301 DTVEHYNPYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRTSWEGLQKRGMMQDLSWDN 360
Query: 734 AAKLYEEVLLAAKYQW 749
AAKLYEEVLLAAKYQW
Sbjct: 361 AAKLYEEVLLAAKYQW 376
>Os06g0229800 Similar to Starch synthase IIA
Length = 810
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/503 (70%), Positives = 431/503 (85%)
Query: 247 DDPSASAAVDLINIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPMYKNYAE 306
DD A +++N+I+VAAEC+PW KTGGLGDVAGALPKALARRGHRVMVVVP Y +YAE
Sbjct: 308 DDSGPLAGENVMNVIVVAAECSPWCKTGGLGDVAGALPKALARRGHRVMVVVPRYGDYAE 367
Query: 307 PQQLGEPRRYQVAGQDMEVIYYHAYIDGVDFVFIDNPIFHHVENDIYGGDRTDILKRMVL 366
Q +G + Y+ AGQD+EV Y+HA+IDGVDFVFID P+F H ++DIYGG+R +I+KRM+L
Sbjct: 368 AQDVGIRKYYKAAGQDLEVKYFHAFIDGVDFVFIDAPLFRHRQDDIYGGNRQEIMKRMIL 427
Query: 367 LCKAAIEVPWYVPCGGYCYGDGNLVFLANDWHTALLPVYLKAYYHDNGFMIYARSVLVIH 426
CKAA+EVPW+VPCGG YGDGNLVFLANDWHTALLPVYLKAYY DNG M Y RSVLVIH
Sbjct: 428 FCKAAVEVPWHVPCGGVPYGDGNLVFLANDWHTALLPVYLKAYYRDNGMMQYTRSVLVIH 487
Query: 427 NIAHQGRGPLDDFSYLDLPVDYMDLFKLYDPFGGDHLNIFAAGIKAADRLLTVSHGYAWE 486
NIA+QGRGP+D+F Y++LP Y+D FKLYDP GG+H NIF AG+K ADR++TVS GY WE
Sbjct: 488 NIAYQGRGPVDEFPYMELPEHYLDHFKLYDPVGGEHANIFGAGLKMADRVVTVSPGYLWE 547
Query: 487 LKTAEGGWGLHGIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQ 546
LKT EGGWGLH II E+DWK GIVNGID +WNP D+HL+SDGY NY++ ++ + K +
Sbjct: 548 LKTTEGGWGLHDIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGYANYTVASLDSSKPR 607
Query: 547 CKAALQKELGLPVRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTGRQDLE 606
CKAALQ+ELGL VR DVP+I FIGRLD QKGVD+I +AMPWIAGQDVQL++LG+GR+DLE
Sbjct: 608 CKAALQRELGLEVRDDVPLIGFIGRLDGQKGVDIIGDAMPWIAGQDVQLVLLGSGRRDLE 667
Query: 607 DTLRRLESQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVV 666
L+R E+QH +VRGWVGFS+++AHR+TAGAD+L+MPSRFEPCGLNQLYAM YGTVPVV
Sbjct: 668 VMLQRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLYAMAYGTVPVV 727
Query: 667 HAVGGLRDTVEHYNPYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRTSWEGLQKRGMM 726
HAVGGLRDT+ ++P+E++GLGWTF++AE ++LI+ALGHCL TYR Y+ SW GLQ RGM
Sbjct: 728 HAVGGLRDTMSAFDPFEDTGLGWTFDRAEPHKLIEALGHCLETYRKYKESWRGLQVRGMS 787
Query: 727 QDLSWDNAAKLYEEVLLAAKYQW 749
QDLSWD+AA+LYEEVL+ AKYQW
Sbjct: 788 QDLSWDHAAELYEEVLVKAKYQW 810
>Os06g0160700 Similar to Starch synthase I, chloroplast precursor (EC 2.4.1.21)
(Soluble starch synthase 1) (SSS 1)
Length = 641
Score = 462 bits (1188), Expect = e-130, Method: Compositional matrix adjust.
Identities = 251/560 (44%), Positives = 341/560 (60%), Gaps = 42/560 (7%)
Query: 203 EFSYDLQMYLDRRPDQSEVVATQDYEAQLSQISEMGQSVAEGTSDDPSASAAVDLINIIL 262
E DL+ + D++ VA++ E+++ + E Q+ + ++
Sbjct: 93 EIEPDLEGLTEDSIDKTIFVASEQ-ESEIMDVKEQAQAKVTRS--------------VVF 137
Query: 263 VAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPMY------KNYAEPQQLGEPRRY 316
V E +P++K+GGLGDV G+LP ALA RGHRVMVV+P Y KN+A + +
Sbjct: 138 VTGEASPYAKSGGLGDVCGSLPIALALRGHRVMVVMPRYMNGALNKNFANAFYTEKHIKI 197
Query: 317 QVAGQDMEVIYYHAYIDGVDFVFIDNPIFHHVENDIYG---GDRTDILKRMVLLCKAAIE 373
G + EV ++H Y D VD+VF+D+P +H N +YG G D R LLC AA E
Sbjct: 198 PCFGGEHEVTFFHEYRDSVDWVFVDHPSYHRPGN-LYGDNFGAFGDNQFRYTLLCYAACE 256
Query: 374 VPWYVPCGGYCYGDGNLVFLANDWHTALLPVYLKAYYHDNGFMIYARSVLVIHNIAHQGR 433
P + GGY YG +F+ NDWH +L+PV L A Y G ARSVLVIHN+AHQG
Sbjct: 257 APLILELGGYIYGQ-KCMFVVNDWHASLVPVLLAAKYRPYGVYRDARSVLVIHNLAHQGV 315
Query: 434 GPLDDFSYLDLPVDYMDLFKLYDPF--------GGDHLNIFAAGIKAADRLLTVSHGYAW 485
P + L LP ++ + P G+ +N + ADR++TVS GY+W
Sbjct: 316 EPASTYPDLGLPPEWYGALEWVFPEWARRHALDKGEAVNFLKGAVVTADRIVTVSQGYSW 375
Query: 486 ELKTAEGGWGLHGIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQ 545
E+ TAEGG GL+ +++ GIVNGID DWNP D L +YS++ + +GK
Sbjct: 376 EVTTAEGGQGLNELLSSRKSVLNGIVNGIDINDWNPSTDKFLP----YHYSVDDL-SGKA 430
Query: 546 QCKAALQKELGLPVRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTGRQDL 605
+CKA LQKELGLP+R DVP+I FIGRLD+QKG+DLI A+P + ++Q +MLG+G
Sbjct: 431 KCKAELQKELGLPIRPDVPLIGFIGRLDYQKGIDLIKLAIPDLMRDNIQFVMLGSGDPGF 490
Query: 606 EDTLRRLESQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPV 665
E +R ES + D+ RGWVGFS+ ++HR+TAG DILLMPSRFEPCGLNQLYAM YGTVPV
Sbjct: 491 EGWMRSTESGYRDKFRGWVGFSVPVSHRITAGCDILLMPSRFEPCGLNQLYAMQYGTVPV 550
Query: 666 VHAVGGLRDTVEHYNPYEES---GLGWTFEKAEANRLIDALGHCLNTYRNYRTSWEGLQK 722
VH GGLRDTVE++NP+ E G GW F +++ AL ++TYR +++SWEGL K
Sbjct: 551 VHGTGGLRDTVENFNPFAEKGEQGTGWAFSPLTIEKMLWALRMAISTYREHKSSWEGLMK 610
Query: 723 RGMMQDLSWDNAAKLYEEVL 742
RGM D +WD+AA YE++
Sbjct: 611 RGMSSDFTWDHAASQYEQIF 630
>Os07g0412100 Similar to Granule-bound starch synthase Ib, chloroplast precursor
(EC 2.4.1.21) (Fragment)
Length = 608
Score = 322 bits (826), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 208/585 (35%), Positives = 293/585 (50%), Gaps = 48/585 (8%)
Query: 181 EQDPFGQRDSSFYHLDEVPDDDEFSYDLQMYLDRRPDQSEVVATQDYEAQLSQISEMGQS 240
+Q P Q S+ + D S + ++ +R S + T+ + + + G
Sbjct: 23 KQSPHMQFQQSYNYGVRFLKRDTLSVRINKHMAKRIATSTGICTKPRRSHMPIVCSAG-- 80
Query: 241 VAEGTSDDPSASAAVDLINIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPM 300
+ II +A EC PW KTGGLGDV G LP ALA GHRVM +VP
Sbjct: 81 -----------------MTIIFIATECHPWCKTGGLGDVLGGLPPALAAMGHRVMTIVPR 123
Query: 301 YKNYAEPQQLGEPRRYQVAGQDMEVIYYHAYIDGVDFVFIDNPIF---------HHVEND 351
Y Y + + + V ++H Y GVD VF+D+P+F +
Sbjct: 124 YDQYKDAWDTNVLVEVNIGDRTETVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGPKLYGP 183
Query: 352 IYGGDRTDILKRMVLLCKAAIEVPWYVPCGGYCYGDG----NLVFLANDWHTALLPVYLK 407
G D D R LLC AA+E P + Y G N+VF+ANDWHT +LP YLK
Sbjct: 184 TTGDDYRDNQLRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVFVANDWHTGVLPCYLK 243
Query: 408 AYYHDNGFMIYARSVLVIHNIAHQGRGPLDDFSYLDLPVDYMDLFKLYD----PFGGDHL 463
+ Y G + A+ IHNIA+QGR +DF L+LP ++ F D P G +
Sbjct: 244 SIYQAKGMYVNAKVAFCIHNIAYQGRFAREDFELLNLPDSFLPSFDFIDGHFKPVVGRKI 303
Query: 464 NIFAAGIKAADRLLTVSHGYAWELKTA-EGGWGLHGIINESDWKFQGIVNGIDTTDWNPR 522
N AGI D ++TVS Y EL + + G L GI+ + GIVNG+D +WNP
Sbjct: 304 NWMKAGITECDLVMTVSPHYVKELASGPDKGVELDGILRTKPLE-TGIVNGMDVYEWNPA 362
Query: 523 CDIHLKSDGYTNYSLETVQAGKQQCKAALQKELGLPVRGDVPVIAFIGRLDHQKGVDLIA 582
D ++ Y TV + K LQ E+GLPV +P+I F+GRL+ QKG D++
Sbjct: 363 TDQYIS----VKYDATTVTEARALNKEMLQAEVGLPVDSSIPLIVFVGRLEEQKGSDILI 418
Query: 583 EAMPWIAGQDVQLIMLGTGRQDLEDTLRRLESQHYDRVRGWVGFSIRLAHRMTAGADILL 642
A+P +VQ+I+LGTG++ +E+ L LE ++ + RG F++ LAH M AGAD ++
Sbjct: 419 AAIPEFVEGNVQIIVLGTGKKKMEEELILLEVKYPNNARGIAKFNVPLAHMMFAGADFII 478
Query: 643 MPSRFEPCGLNQLYAMMYGTVPVVHAVGGLRDTVEHYNPYEESGL----GWTFEKAEANR 698
+PSRFEPCGL QL M YG VP+ + GGL DTV+ GL T + +
Sbjct: 479 VPSRFEPCGLIQLQGMRYGVVPICSSTGGLVDTVKEGVTGFHMGLFNVECETVDPVDVTA 538
Query: 699 LIDALGHCLNTYRNYRTSWEGLQKRGMMQDLSWDNAAKLYEEVLL 743
+ + L Y +++ + + M QDLSW AK +EEVLL
Sbjct: 539 VASTVKRALKQYNT--PAFQEMVQNCMAQDLSWKGPAKKWEEVLL 581
>Os06g0133000 Granule-bound starch synthase I, chloroplast precursor (EC
2.4.1.21)
Length = 609
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 208/529 (39%), Positives = 280/529 (52%), Gaps = 32/529 (6%)
Query: 239 QSVAEGTSDDPSAS--AAVDLINIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMV 296
+SV G+ PS A +N++ V AE APWSKTGGLGDV G LP A+A GHRVMV
Sbjct: 62 RSVQRGSRRFPSVVVYATGAGMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMV 121
Query: 297 VVPMYKNYAEPQQLGEPRRYQVAGQDMEVIYYHAYIDGVDFVFIDNPIF-----HHVEND 351
+ P Y Y + +VA + V ++H Y GVD VFID+P F
Sbjct: 122 ISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEK 181
Query: 352 IYGGDR----TDILKRMVLLCKAAIEVPWYVPCGGYCYGDG----NLVFLANDWHTALLP 403
IYG D D R LLC+AA+E P + Y G ++VF+ NDWHT L
Sbjct: 182 IYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPLA 241
Query: 404 VYLKAYYHDNGFMIYARSVLVIHNIAHQGRGPLDDFSYLDLPVDYMDLFKLYD----PFG 459
YLK Y NG A+ IHNI++QGR +D+ L+L + F D P
Sbjct: 242 SYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVE 301
Query: 460 GDHLNIFAAGIKAADRLLTVSHGYAWELKTAEG-GWGLHGIINESDWKFQGIVNGIDTTD 518
G +N AGI ADR+LTVS YA EL + G L I+ + GIVNG+D ++
Sbjct: 302 GRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTG--ITGIVNGMDVSE 359
Query: 519 WNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELGLPVRGDVPVIAFIGRLDHQKGV 578
W+P D ++ + Y T K K ALQ E GLPV +P+IAFIGRL+ QKG
Sbjct: 360 WDPSKDKYITA----KYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGP 415
Query: 579 DLIAEAMPWIAGQDVQLIMLGTGRQDLEDTLRRLESQHYDRVRGWVGFSIRLAHRMTAGA 638
D++A A+P + +DVQ+++LGTG++ E L+ +E ++ +VR V F+ LAH + AGA
Sbjct: 416 DVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGA 475
Query: 639 DILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGGLRDTV-EHYNPYEESGLGW---TFEKA 694
D+L +PSRFEPCGL QL M YGT + GGL DTV E + L E +
Sbjct: 476 DVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPS 535
Query: 695 EANRLIDALGHCLNTYRNYRTSWEGLQKRGMMQDLSWDNAAKLYEEVLL 743
+ ++ L + ++E + + M QDLSW AK +E VLL
Sbjct: 536 DVKKVAATLKRAIKVVGT--PAYEEMVRNCMNQDLSWKGPAKNWENVLL 582
>Os01g0720600 Starch synthase IVa (Glycogen (Starch) synthase-like)
Length = 972
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 162/512 (31%), Positives = 241/512 (47%), Gaps = 44/512 (8%)
Query: 258 INIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPMYKNYAEPQQLGEPRRYQ 317
++I+ +AAE AP +K GGL DV L KAL +GH V +V+P Y + QL + +
Sbjct: 477 LHIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKY----DCMQLDQITNLK 532
Query: 318 VAGQDMEVIY---------YHAYIDGVDFVFID--NPIFHHVENDIYGGDRTDILKRMVL 366
V ++ + + ++G+ FI+ +P YG D KR
Sbjct: 533 VLDVVIQSYFDGNLFSNNVWTGTVEGLPVYFIEPQHPSKFFWRAQYYG--EHDDFKRYSY 590
Query: 367 LCKAAIEVPWYVPCGGYCYGDGNLVFLANDWHTALLPVYLKAYYHDNGFMIYARSVLVIH 426
+AA+E+ Y G + +DW TA + Y GF AR H
Sbjct: 591 FSRAALELL-------YQSGKKIDIIHCHDWQTAFVAPLYWDIYATRGFS-SARICFTCH 642
Query: 427 NIAHQGRGPLDDFSYLDLPVDYMDLFKLYDPFGGDHLNIFAAGIKAADRLLTVSHGYAWE 486
N +QG P D SY L V+ +D +N+ GI ++ + TVS YA E
Sbjct: 643 NFEYQGTAPAPDLSYCGLDVEQLDRPDRMQDNAHGRINVAKGGIVYSNIVTTVSPTYALE 702
Query: 487 LKTAEGGWGLHGIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQ 546
+++ EGG GL + KF GI+NGIDT WNP D L YS +Q GK
Sbjct: 703 VRS-EGGRGLQDTLKMHSRKFVGILNGIDTGTWNPSTDRFLA----VQYSATDLQ-GKAA 756
Query: 547 CKAALQKELGLPVR-GDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTG---- 601
KA L+K+LGL P++A I RL QKG+ LI A+ A Q ++LG+
Sbjct: 757 NKAFLRKQLGLYSEDASQPLVACITRLVPQKGLHLIRHAIYKTAELGGQFVLLGSSPVPH 816
Query: 602 -RQDLEDTLRRLESQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMY 660
+++ E + Q + +R + + L+H + A +D+ ++PS FEPCGL Q+ AM Y
Sbjct: 817 IQREFEGVADQF--QKNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMRY 874
Query: 661 GTVPVVHAVGGLRDTVEHYN----PYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRTS 716
G+VP+V GGL D+V ++ P E G+TF + + L L + Y
Sbjct: 875 GSVPIVRQTGGLCDSVFDFDDETIPVELRN-GFTFARTDEQDLSSCLERAFSYYSRKPMV 933
Query: 717 WEGLQKRGMMQDLSWDNAAKLYEEVLLAAKYQ 748
W+ L ++ M D SWD+ A YE + +A Q
Sbjct: 934 WKQLVQKDMQIDFSWDSPASQYENLYQSAVAQ 965
>Os05g0533600 Similar to Starch synthase IVa (Glycogen (Starch) synthase-like)
Length = 915
Score = 206 bits (525), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 161/503 (32%), Positives = 240/503 (47%), Gaps = 40/503 (7%)
Query: 258 INIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPMYKNYAEPQQLGEPRRYQ 317
++II +AAE AP +K GGL DV L KAL ++GH V +++P Y + + Q+ +
Sbjct: 422 LHIIHIAAEMAPVAKVGGLADVISGLGKALQKKGHLVEIILPKY-DCMQNDQVNNLKVLD 480
Query: 318 VAGQD------MEVIYYHAYIDGVDFVFID--NPIFHHVENDIYGGDRTDILKRMVLLCK 369
V Q + ++G+ FI+ +P YG D KR +
Sbjct: 481 VVVQSYFEGNLFNNKIWTGTVEGLPVYFIEPQHPAKFFWRAQYYG--EHDDFKRFAYFSR 538
Query: 370 AAIEVPWYVPCGGYCYGDGNLVFLANDWHTALL-PVYLKAYYHDNGFMIYARSVLVIHNI 428
AA+E+ Y + +DW TA + P+Y +AY + GF AR HN
Sbjct: 539 AALELL-------YQSQKKIDIIHCHDWQTAFVAPLYWEAYA-NLGFN-SARICFTCHNF 589
Query: 429 AHQGRGPLDDFSYLDLPVDYMDLFKLYDPFGGDHLNIFAAGIKAADRLLTVSHGYAWELK 488
+QG P D + L V +D +N+ I ++ + TVS YA E++
Sbjct: 590 EYQGAAPAQDLACCGLDVQQLDREDRMRDNSHGRINVVKGAIVYSNIVTTVSPTYALEVR 649
Query: 489 TAEGGWGLHGIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCK 548
+ EGG GL + KF GI+NGIDT WNP D HLK Y+ +Q GK K
Sbjct: 650 S-EGGRGLQDSLKLHSRKFVGILNGIDTDTWNPSTDRHLK----VQYNANDLQ-GKAANK 703
Query: 549 AALQKELGLP-VRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTGRQDLED 607
AAL+K+L L P++ I RL QKGV LI A+ A Q ++LG+ +
Sbjct: 704 AALRKQLNLSSTNASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSS--PVPH 761
Query: 608 TLRRLES-----QHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGT 662
R E Q+ + +R + + L+H + A +D+ ++PS FEPCGL Q+ AM YG+
Sbjct: 762 IQREFEGIADHFQNNNNIRLLLKYDDSLSHWIYAASDMFIVPSMFEPCGLTQMIAMRYGS 821
Query: 663 VPVVHAVGGLRDTVEHYN----PYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRTSWE 718
VP+V GGL D+V ++ P E G+TF + L A+ N Y W+
Sbjct: 822 VPIVRKTGGLNDSVFDFDDETIPKELRN-GFTFVHPDEKALSGAMERAFNYYNRKPEVWK 880
Query: 719 GLQKRGMMQDLSWDNAAKLYEEV 741
L ++ M D SW ++A YE++
Sbjct: 881 QLVQKDMRIDFSWASSASQYEDI 903
>Os04g0624600 Similar to Starch synthase DULL1 (Fragment)
Length = 1216
Score = 192 bits (488), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 153/503 (30%), Positives = 234/503 (46%), Gaps = 70/503 (13%)
Query: 258 INIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPMYK--NYAEPQQLGEPRR 315
++I+ +A E AP +K GGLGDV +L +A+ GH V V++P Y N + + L R
Sbjct: 768 MHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLGHNVEVILPKYDCLNLSNVKDLH--YR 825
Query: 316 YQVAGQDMEVIYYHAYIDGVDFVFIDNPIFHHVENDIYGGDRTDILKRMVLLCKAAIEVP 375
+ E+ + ++ V F++ +YG R D R C +A+E
Sbjct: 826 QSFTWGNTEIKVWFGKVEDVPVYFLEPQNGMFWVGCVYG--RND-ESRFGFFCHSALEFL 882
Query: 376 WYVPCGGYCYGDGNLVFLANDWHTALLPVYLKAYYHDNGFMIYARSVLVIHNIAHQGRGP 435
G + +DW +A + K Y NG + R V IHN+
Sbjct: 883 -------RQNGSSPDIIHCHDWSSAPVAWLFKEQYAQNG-LSNGRVVFTIHNLE------ 928
Query: 436 LDDFSYLDLPVDYMDLFKLYDPFGGDHLNIFAAGIKAADRLLTVSHGYAWELKTAEGGWG 495
FG H+ + D+ TVS+ Y+ E+
Sbjct: 929 ----------------------FGAHHI---GKAMARCDKATTVSYTYSREVSG------ 957
Query: 496 LHGIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKEL 555
HG I KF GI NGID W+P D + +Y+ E V GK K ALQ+ L
Sbjct: 958 -HGAIAPHFSKFHGIRNGIDPDIWDPYSDNFIP----VHYTSENVVEGKSAAKKALQQRL 1012
Query: 556 GLPVRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTG-----RQDLEDTLR 610
GL + D PV+ I RL QKG+ LI A+ ++ Q+++LG+ + D +
Sbjct: 1013 GLQ-QTDTPVVGIISRLTVQKGIHLIKHAIYRTLERNGQVVLLGSAPDHRIQGDFTNLAS 1071
Query: 611 RLESQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVG 670
+L +++ RV+ + + L+H + AGAD +L+PS FEPCGL QL AM YG++P+V G
Sbjct: 1072 KLHGEYHGRVKLCLTYDEPLSHLIYAGADFILVPSMFEPCGLTQLTAMRYGSIPIVRKTG 1131
Query: 671 GLRDTV----EHYNPYEESGL---GWTFEKAEANRLIDALGHCLNTYRNYRTSWEGLQKR 723
GL DTV + + E GL G++FE A++N + AL + T+ + R + L KR
Sbjct: 1132 GLYDTVFDVDDDKDRAREQGLEPNGFSFEGADSNGVDYALDRAITTWYDARDWFHSLCKR 1191
Query: 724 GMMQDLSWDNAAKLYEEVLLAAK 746
M QD +W+ A Y E+ +A+
Sbjct: 1192 VMEQDWTWNRPALDYMELYHSAR 1214
>Os10g0207650
Length = 462
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 56/73 (76%)
Query: 601 GRQDLEDTLRRLESQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMY 660
G E +R +ES++ D+ RGWVGF++ ++HR+TA DILLM SRFEPCGLNQLYAM Y
Sbjct: 364 GDPGFEGWMRSIESEYKDKFRGWVGFTVLVSHRITACCDILLMSSRFEPCGLNQLYAMQY 423
Query: 661 GTVPVVHAVGGLR 673
G VPVVH GGLR
Sbjct: 424 GIVPVVHGTGGLR 436
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.138 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 25,663,160
Number of extensions: 1136932
Number of successful extensions: 2661
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 2626
Number of HSP's successfully gapped: 11
Length of query: 749
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 641
Effective length of database: 11,396,689
Effective search space: 7305277649
Effective search space used: 7305277649
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 160 (66.2 bits)