Os02g0744700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Starch synthase isoform zSTSII-2 (EC 2.4.1.21).
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Os02g0744700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Starch synthase isoform zSTSII-2 (EC 2.4.1.21).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56.57 | 0.353 | 14 | -0.482 | 1.63 | -1.03 | 0.958 | 0.43 | -0.315 | 6.64 | 18.62 | 10 | -- | -- |
| 57.46 | 0.353 | 14 | -0.496 | 1.63 | -1.06 | 0.806 | -- | -0.316 | 6.52 | 18.63 | 9 | -- | -- |
| 58.61 | 0.357 | 14 | -0.465 | 1.63 | -1.03 | -- | 0.272 | -0.313 | 6.62 | 18.43 | 8 | -- | -- |
| 58.95 | 0.358 | 14 | -0.482 | 1.64 | -1.02 | -- | -- | -0.315 | 6.66 | 18.84 | 8 | -- | -- |
| 187.27 | 0.637 | 14.1 | -0.389 | -- | -1.21 | -- | 0.328 | -0.296 | -- | 9.763 | 6 | -- | -- |
| 76.49 | 0.41 | 14 | -0.467 | 2.11 | -- | 0.385 | -- | -0.304 | 8.61 | -- | -- | -- | -- |
| 76.98 | 0.411 | 14 | -0.455 | 2.11 | -- | -- | -- | -0.304 | 8.62 | -- | -- | -- | -- |
| 187.92 | 0.638 | 14.1 | -0.398 | -- | -1.21 | -- | -- | -0.298 | -- | 9.734 | 6 | -- | -- |
| 65.04 | 0.376 | 14 | -- | 1.64 | -0.998 | -- | -- | -0.262 | 6.72 | 18.63 | 8 | -- | -- |
| 328.04 | 0.846 | 14.1 | -0.448 | -- | -- | -- | -- | -0.286 | -- | -- | -- | -- | -- |
| 82.42 | 0.425 | 14 | -- | 2.11 | -- | -- | -- | -0.253 | 8.64 | -- | -- | -- | -- |
| 190.67 | 0.643 | 14.1 | -- | -- | -1.22 | -- | -- | -0.247 | -- | 9.996 | 4 | -- | -- |
| 333.34 | 0.852 | 14.1 | -- | -- | -- | -- | -- | -0.236 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.07 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 6 |
| 2 | 45.57 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 10 | 47.36 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 13 | 47.50 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 18 |
| 15 | 47.50 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 18 |
| 19 | 47.58 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 22 | 47.64 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 24 | 47.64 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 26 | 47.64 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 27 | 47.64 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 30 | 47.89 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 18 |
| 32 | 47.90 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 33 | 47.94 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 34 | 47.97 | humidity | 90.0 | 270 | < th | dose independent | rect. | 15 | 2 |
| 36 | 48.00 | humidity | 90.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 37 | 48.05 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 6 |
| 38 | 48.05 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 6 |
| 40 | 48.10 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 15 |
| 42 | 48.12 | temperature | 25.0 | 270 | > th | dose independent | rect. | 15 | 2 |
| 46 | 48.35 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 19 |
| 51 | 48.55 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 19 |
| 55 | 48.72 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 17 | 8 |
| 61 | 48.88 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 15 |
| 73 | 49.04 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 5 |
| 75 | 49.05 | humidity | 60.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 76 | 49.05 | temperature | 15.0 | 270 | > th | dose independent | rect. | 23 | 20 |
| 79 | 49.06 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 80 | 49.06 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 5 |
| 82 | 49.06 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 85 | 49.06 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 5 |
| 93 | 49.06 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 19 |
| 94 | 49.06 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 5 |
| 105 | 49.11 | temperature | 15.0 | 270 | > th | dose independent | rect. | 23 | 10 |
| 113 | 49.24 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 19 |
| 126 | 49.41 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 5 |
| 127 | 49.41 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 5 |
| 128 | 49.42 | radiation | 1.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 129 | 49.42 | radiation | 1.0 | 270 | < th | dose dependent | sin | 15 | NA |
| 158 | 49.63 | radiation | 1.0 | 270 | > th | dose independent | rect. | 15 | 2 |
| 159 | 49.64 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 164 | 49.70 | radiation | 10.0 | 10 | < th | dose independent | rect. | 1 | 19 |
| 165 | 49.71 | radiation | 1.0 | 270 | > th | dose independent | rect. | 15 | 14 |
| 166 | 49.72 | radiation | 1.0 | 270 | > th | dose independent | rect. | 15 | 4 |
| 202 | 49.94 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 2 |
| 226 | 49.98 | radiation | 1.0 | 270 | < th | dose independent | sin | 15 | NA |
| 232 | 50.01 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 2 |
| 235 | 50.03 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 16 | 5 |
| 237 | 50.05 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 19 |
| 238 | 50.05 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 19 |
| 240 | 50.06 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 10 |
| 241 | 50.06 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 10 |
| 242 | 50.06 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 14 |
| 244 | 50.09 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 10 |
| 248 | 50.14 | radiation | 1.0 | 270 | > th | dose independent | sin | 15 | NA |
| 261 | 50.23 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 2 |
| 264 | 50.25 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 2 |
| 266 | 50.25 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 15 | 2 |
| 269 | 50.25 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 22 |
| 277 | 50.26 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 23 | 10 |
| 301 | 50.31 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 1 | 9 |
| 315 | 50.43 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 19 |
| 321 | 50.46 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 10 |
| 343 | 50.49 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 2 |
| 344 | 50.49 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 10 |
| 349 | 50.51 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 22 |
| 350 | 50.51 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 22 |
| 354 | 50.56 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 10 |
| 357 | 50.57 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 2 |
| 358 | 50.57 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 2 |
| 365 | 50.62 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 5 |
| 381 | 50.74 | radiation | 40.0 | 270 | < th | dose independent | rect. | 23 | 10 |
| 382 | 50.74 | temperature | 15.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 405 | 50.85 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 9 | 15 |
| 410 | 50.87 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 14 |
| 412 | 50.87 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 14 |
| 480 | 51.06 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 484 | 51.08 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 22 |
| 523 | 51.17 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 9 |
| 524 | 51.17 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 9 |
| 534 | 51.21 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 535 | 51.21 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 536 | 51.21 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 559 | 51.28 | radiation | 1.0 | 270 | < th | dose independent | rect. | 9 | 16 |
| 578 | 51.32 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 1 | 9 |
| 597 | 51.36 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 10 |
| 599 | 51.36 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 10 |
| 708 | 51.82 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 710 | 51.83 | wind | 9.0 | 270 | < th | dose dependent | rect. | 19 | 4 |
| 807 | 52.06 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 14 |
| 829 | 52.13 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 19 | 4 |
| 836 | 52.14 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 8 |
| 878 | 52.28 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 19 | 4 |
| 887 | 52.31 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 19 | 18 |
| 895 | 52.33 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 896 | 52.33 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 905 | 52.36 | temperature | 20.0 | 10 | > th | dose independent | rect. | 16 | 4 |
| 939 | 52.44 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 19 |
| 980 | 52.61 | wind | 9.0 | 10 | < th | dose independent | rect. | 2 | 18 |
| 994 | 52.66 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 22 |