BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0378400 Os10g0378400|AK059720
(338 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0378400 Protein of unknown function DUF641, plant doma... 627 e-180
Os01g0823700 Protein of unknown function DUF641, plant doma... 195 4e-50
Os10g0508100 Protein of unknown function DUF641, plant doma... 174 6e-44
Os01g0203800 Protein of unknown function DUF641, plant doma... 152 5e-37
Os05g0206600 Protein of unknown function DUF641, plant doma... 120 1e-27
Os03g0825600 Conserved hypothetical protein 118 6e-27
Os12g0113900 Conserved hypothetical protein 114 9e-26
Os11g0114000 Protein of unknown function DUF641, plant doma... 101 7e-22
>Os10g0378400 Protein of unknown function DUF641, plant domain containing protein
Length = 338
Score = 627 bits (1618), Expect = e-180, Method: Compositional matrix adjust.
Identities = 305/338 (90%), Positives = 305/338 (90%)
Query: 1 MVLPGSKESQNYDSNNQKVHPQPIDENMNQNLLKTYEVMVKKFQSQIQTRDTEITHLQQQ 60
MVLPGSKESQNYDSNNQKVHPQPIDENMNQNLLKTYEVMVKKFQSQIQTRDTEITHLQQQ
Sbjct: 1 MVLPGSKESQNYDSNNQKVHPQPIDENMNQNLLKTYEVMVKKFQSQIQTRDTEITHLQQQ 60
Query: 61 IDEAXXXXXXXXXXXXQRGLLNKXXXXXXXXXNYFSIELTPSLFTSAVDNAYQSIHDFSK 120
IDEA QRGLLNK NYFSIELTPSLFTSAVDNAYQSIHDFSK
Sbjct: 61 IDEAKLRKSKLEKKLKQRGLLNKESEESDDEDNYFSIELTPSLFTSAVDNAYQSIHDFSK 120
Query: 121 PLINMMKXXXXXXXXXXXXIEPAVVYTRRAHKKYAFESYICQRMFGGFQEESFSVKAANI 180
PLINMMK IEPAVVYTRRAHKKYAFESYICQRMFGGFQEESFSVKAANI
Sbjct: 121 PLINMMKAAGWDLDAAANAIEPAVVYTRRAHKKYAFESYICQRMFGGFQEESFSVKAANI 180
Query: 181 TVSNEAFFHQFLAVRAMDPLDVLSQNPDSVFGKFCRSKYLLLVHPKMEGSFFGNMDQRNY 240
TVSNEAFFHQFLAVRAMDPLDVLSQNPDSVFGKFCRSKYLLLVHPKMEGSFFGNMDQRNY
Sbjct: 181 TVSNEAFFHQFLAVRAMDPLDVLSQNPDSVFGKFCRSKYLLLVHPKMEGSFFGNMDQRNY 240
Query: 241 VMSGGHPRTPFYQAFLKLAKSIWLLHRLAYSFDPKVKVFQVKKGSDFSEIHMESVVKNII 300
VMSGGHPRTPFYQAFLKLAKSIWLLHRLAYSFDPKVKVFQVKKGSDFSEIHMESVVKNII
Sbjct: 241 VMSGGHPRTPFYQAFLKLAKSIWLLHRLAYSFDPKVKVFQVKKGSDFSEIHMESVVKNII 300
Query: 301 LDEGAERPKVGLMVMPGFLIGTSVIQSRVYLSGVKSAD 338
LDEGAERPKVGLMVMPGFLIGTSVIQSRVYLSGVKSAD
Sbjct: 301 LDEGAERPKVGLMVMPGFLIGTSVIQSRVYLSGVKSAD 338
>Os01g0823700 Protein of unknown function DUF641, plant domain containing protein
Length = 437
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 158/293 (53%), Gaps = 21/293 (7%)
Query: 42 KFQSQIQTRDTEITHLQQQIDEAXXXXXXXXXXXXQRGLLNKXXXXXXXXXNYFSIELTP 101
+ Q+ + RD+EI L+ ++DE Q L + + ++
Sbjct: 161 ELQAGMCKRDSEIVCLRAELDELERKNMELEEKIGQSALQKEGSFA-------IGMGVST 213
Query: 102 SLFTSAVDNAYQSIHDFSKPLINMMKXXXXXXXXXXXXIEPAVVYTRRAHKKYAFESYIC 161
+F + + +SIHDF+K ++ MK I+ +VVY +R+HK YA E+Y
Sbjct: 214 DMFMELFELSTKSIHDFAKLVVRWMKLSRWNLGNLTSPIDNSVVYDKRSHKNYAVEAYFA 273
Query: 162 QRMFGGFQEESFSVKAANITVSNEAFFHQFLAVRAMDPLDVLSQNPDSVFGKFCRSKYLL 221
M G +EE S+ + +S DP D L + PDS FG+FCR KYL
Sbjct: 274 CMMLMGHKEEYLSLDVFDYVMSFS------------DPFDALMKAPDSCFGRFCREKYLA 321
Query: 222 LVHPKMEGSFFGNMDQRNYVMSGGHPRTPFYQAFLKLAKSIWLLHRLAYSFDPKVKVFQV 281
++ P ME SFFGN+D R++V +GGHPRTPFYQAF+ +++ +W +A S +P+ ++F V
Sbjct: 322 ILPPSMEDSFFGNLDHRSFVENGGHPRTPFYQAFVTMSRYVWASLTVARSLNPRAEMFYV 381
Query: 282 KKGSDFSEIHMESVVKNIILDEGAERPKVGLMVMPGFLIGTSVIQSRVYLSGV 334
K G++F HME V I EG ++ VG VMPGF IG +VI+ RVYLS V
Sbjct: 382 KGGTEFRSKHMECVPSKIT-KEG-DKVSVGFTVMPGFKIGCTVIRCRVYLSMV 432
>Os10g0508100 Protein of unknown function DUF641, plant domain containing protein
Length = 470
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 158/315 (50%), Gaps = 18/315 (5%)
Query: 29 NQNLLKTYEVMVKKFQSQIQTRDTEITHLQQQIDEAXXXXXXXXXXXXQRGLLNKXXXXX 88
NQ LL++++ +V + Q+ + +D L++ E R L
Sbjct: 151 NQALLRSFDAVVNRLQAALDGKDAAAASLRRDHAE-LADGNARLGARLDRAL---APPPG 206
Query: 89 XXXXNYFSIELTPSLFTSAVDNAYQSIHDFSKPLINMMKXXXXXXXXXXXXIEPAVVYTR 148
+ L+ +F S + +A + H F++ L ++++ + P V Y+R
Sbjct: 207 AGGDDALGAMLSAGVFDSVLRDALRVAHRFTRSLADLLRCAGWDLAAAAAAVYPGVAYSR 266
Query: 149 RAHKKYAFESYICQRMFGGFQEESF-------SVKAANITVSNEAFFHQFLAVRAMDPLD 201
H +YA S +C MF GF F +++ ++ + QF+ DP++
Sbjct: 267 PGHCRYALLSRVCLSMFDGFDSYQFGGSTDATTLEGIDLAIRRNESLQQFIEHSDADPME 326
Query: 202 VLSQNPDSVFGKFCRSKYLLLVHPKMEGSFFGNMDQRNYVMSGGHPRTPFYQAFLKLAKS 261
+++ +PD F +FC KY L+HP +E S FGN D + G P Y+ F+ +A S
Sbjct: 327 LINSSPDCEFAQFCDRKYKQLIHPGIESSLFGNSDCGKLPVLG--VAGPLYELFVAMASS 384
Query: 262 IWLLHRLAYSFDPKVKVFQVKKGSDFSEIHMESVVKNIILDEGAE-----RPKVGLMVMP 316
IW LHRLA+++DP V +FQ+ +G+++S ++ME++V++ E RPKVG V+P
Sbjct: 385 IWTLHRLAWAYDPAVGIFQIGQGAEYSVVYMENIVRSKGFSGSKELGKMMRPKVGFTVVP 444
Query: 317 GFLIGTSVIQSRVYL 331
GF +G +VIQ RVYL
Sbjct: 445 GFRLGGTVIQCRVYL 459
>Os01g0203800 Protein of unknown function DUF641, plant domain containing protein
Length = 520
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 159/321 (49%), Gaps = 30/321 (9%)
Query: 30 QNLLKTYEVMVKKFQSQIQTRDTEITHLQQQIDEAXXXXXXXXXXXXQRGLLNKXXXXXX 89
++LLKTY++ +K + +++ ++ E + + L+
Sbjct: 206 RHLLKTYQITARKLEGELRAKEAEADRARSSL------TAELRAERAMEARLHPGRTLAS 259
Query: 90 XXXNYFSIELTPSLFTSAVDNAYQSIHDFSKPLINMMKXXXXXXXXXXXXIEPAVVYTRR 149
+ S L P+ F +A+ + +SI FSK ++N M+ + P V R
Sbjct: 260 LDELHLS-GLNPTHFLTALRHTVKSIRSFSKSMLNSMQSAGWDLAAAAAAVHPGVQLRRA 318
Query: 150 AHKKYAFESYICQRMFGGFQEESFSVKAANITVSNE-------AFFHQFLAVRAMDPLDV 202
K+ FESY+ +MF F F N++ +E FF +F ++A
Sbjct: 319 GDTKFVFESYVAMKMFANFHRRDF-----NLSFLDEREFYDRRRFFEEFTELKAAPASAF 373
Query: 203 L-SQNPD-SVFGKFCRSKYLLLVHPKMEGSFFGNMDQRNYVMSG-GHPRTPFYQAFLKLA 259
L ++N FGKF R+KYL LVH +ME +FFG ++QR V +G G P + ++ F ++A
Sbjct: 374 LDARNARWGGFGKFLRAKYLSLVHARMETAFFGRLEQRGIVSAGPGFPESSWFADFAEMA 433
Query: 260 KSIWLLHRLAYSFDPKVK-----VFQVKKGSDFSEIHMESVV---KNIILDEGAERPKVG 311
+ +WLLH L Y+FD + +FQV+ G+ FSE++MESV + AE VG
Sbjct: 434 RRVWLLHCLFYAFDGGAEEDGASIFQVRTGARFSEVYMESVSDGRSDEAAAAAAEERVVG 493
Query: 312 LMVMPGFLIGTSVIQSRVYLS 332
V+PGF +G ++IQ RVYLS
Sbjct: 494 FTVVPGFRVGRTMIQCRVYLS 514
>Os05g0206600 Protein of unknown function DUF641, plant domain containing protein
Length = 485
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 19/253 (7%)
Query: 99 LTPSLFTSAVDNAYQSIHDFSKPLINMMKXXXXXXXXXXXXIEPAVVYTRRAHKKYAFES 158
L + F +A+ +A +S+ F+K ++ M+ P V K+A ES
Sbjct: 227 LNATHFLTALRHAARSVRSFAKSMLGEMRRAGWDPVAAAAAAHPGVPLRHPGDAKFALES 286
Query: 159 YICQRMFGGFQEESFSVKAANITVS--NEAFFHQFLAVRAMDPLDVLSQNPD--SVFGKF 214
++ +MF GF F + A + S F +F ++A + L G+F
Sbjct: 287 FVALKMFDGFHRRDFGLSALHDRSSYDRRRLFDEFAELKAAPAAEFLDARSSRWGALGEF 346
Query: 215 CRSKYLLLVHPKMEGSFFGNMDQRNYVMSGGH--PRTPFYQAFLKLAKSIWLLHRLAYSF 272
R +YL +VH +ME +FFG+ QR S G P TP++ F ++A+ +WLLH L +F
Sbjct: 347 LRDRYLSVVHERMEAAFFGSTAQRGAAASAGAALPGTPWFAEFAEMARRVWLLHCLFLAF 406
Query: 273 DP--KVKVFQVKKGSDFSEIHMESVVKNIILDEGAERPK-----------VGLMVMPGFL 319
D +FQV G+ FSE++MESV + VG V+PGF
Sbjct: 407 DDGGASTIFQVAAGARFSEVYMESVGDGDGDGDDGGAGTAVAAAAAGDRVVGFTVVPGFK 466
Query: 320 IGTSVIQSRVYLS 332
+G +V+Q RVYLS
Sbjct: 467 VGRTVMQCRVYLS 479
>Os03g0825600 Conserved hypothetical protein
Length = 317
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 142/302 (47%), Gaps = 21/302 (6%)
Query: 36 YEVMVKKFQSQIQTRDTEITHLQQQIDEAXXXXXXXXXXXXQRGLLNKXXXXXXXXXNYF 95
YE + + Q+Q + E+ L++++ A ++
Sbjct: 24 YEAALDDLRRQLQAKQAEVDGLKEKLAVASNRRN------------SRHHPSKHNASGGG 71
Query: 96 SIELTPSLFTSAVDNAYQSIHDFSKPLINMMKXXXXXXXXXXXXIEPAVVYTRRAHKKYA 155
T LF + + A +I F+ L+ +M+ + V + + K+A
Sbjct: 72 GGAPTAELFAACAEQARAAIRAFAGHLLQLMRAAGLDLAAATRSLTKIPVSSPQL-AKHA 130
Query: 156 FESYICQRMFGGFQEESFSVKAANITVSNEAFFH-----QFLAVRAMDPLDVLSQNPDSV 210
E+++ + + GF+ ESF + + ++ + A F QF +R M+P ++L P
Sbjct: 131 LEAHVTRVLLVGFEHESFYLDGSLSSLLDPAAFRRERYTQFRDMRGMEPAELLGLLPTCP 190
Query: 211 FGKFCRSKYLLLVHPKMEGSFFGNMDQRNYVMSGGHPRTPFYQAFLKLAKSIWLLHRLAY 270
FG++ SK+ L+ P++E + G+ + R V G HPRTPFY FL+ AK++W+LH LA+
Sbjct: 191 FGRYAASKFAALLPPRVEQAVLGDGEHRRAVEGGAHPRTPFYGEFLRAAKAVWMLHLLAF 250
Query: 271 SFDPKVKVFQVKKGSDFSEIHMESVVKNIILDEGAERPKVGLMVMPGFLIGT-SVIQSRV 329
+ + F+ +G++F +MESV VG V PGF +G +V+++RV
Sbjct: 251 ALETPPSHFEAGRGAEFHPDYMESVAGGRGGGAAGM--VVGFAVAPGFRLGNGAVVRARV 308
Query: 330 YL 331
YL
Sbjct: 309 YL 310
>Os12g0113900 Conserved hypothetical protein
Length = 423
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 146/314 (46%), Gaps = 51/314 (16%)
Query: 39 MVKKFQSQIQTRDTEITHLQQQIDEAXXXXXXXXXXXXQRGLLNKXXXXXXXXXNY---F 95
+V++ +++ + +D++I L++++D LNK N+ +
Sbjct: 125 LVQELEAETRKKDSDIMLLRRELD----------GLKSANSRLNKQISSSKPSVNHHKDY 174
Query: 96 SIEL----TPSLFTSAVDNAYQSIHDFSKPLINMMKXXXXXXXXXXXXIEPAVVYTRRAH 151
SI L TPS A S+HDF++ + +++ P +
Sbjct: 175 SIVLKKLTTPSAVLELFKVASTSVHDFAELIFSLISSPDHRCPNNADEHSP--------Y 226
Query: 152 KKYAFESYICQRMF----GGFQEESFSVKAANITVSNEAFFHQFLAVRAMDPLDVLSQNP 207
K+Y+ E+Y+ + M G ++ + A F + + R DPLD L ++P
Sbjct: 227 KRYSLEAYLSRTMLAVHDGAEDDDELDL----------ARFDRIM--RCCDPLDALMEHP 274
Query: 208 DSVFGKFCRSKYLLLVHPKMEGSFF-GNMDQRNYVMSGGHPRTPFYQAFLKLAKSIWLLH 266
+S F +FCR+KYL V +ME + F N+D R +V GGHPRT FY+AF +A+S W L
Sbjct: 275 NSSFARFCRTKYLAAVSSEMEAAMFRNNLDVRAFVSRGGHPRTWFYRAFATMARSAWAL- 333
Query: 267 RLAYSFDPK------VKVFQVKKGSDFSEIHMESVVKNIILDEG--AERPKVGLMVMPGF 318
R+A + + V++ ++GS ++ +M+SVV + E V V PG
Sbjct: 334 RVAVTARRRCCGRGSVRMLYARRGSRYAAEYMDSVVAAAAAADAGRGEGDGVAFTVTPGM 393
Query: 319 LIGTSVIQSRVYLS 332
+G +++ RV L
Sbjct: 394 KVGETMVACRVLLC 407
>Os11g0114000 Protein of unknown function DUF641, plant domain containing protein
Length = 422
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 139/313 (44%), Gaps = 50/313 (15%)
Query: 39 MVKKFQSQIQTRDTEITHLQQQIDEAXXXXXXXXXXXXQRGLLNKXXXXXXXXXNY---F 95
+V++ +++ + +D++I L++++D LNK N+ +
Sbjct: 125 LVQELEAETRKKDSDIMLLRRELD----------GLKSANSRLNKQISSSKPSVNHHKDY 174
Query: 96 SIEL----TPSLFTSAVDNAYQSIHDFSKPLINMMKXXXXXXXXXXXXIEPAVVYTRRAH 151
S+ L TPS A S+HDF++ + +++ P +
Sbjct: 175 SVVLKKLTTPSAVLELFKVASTSVHDFAELIFSLISSSDHHCTNNADEHSP--------Y 226
Query: 152 KKYAFESYICQRMF----GGFQEESFSVKAANITVSNEAFFHQFLAVRAMDPLDVLSQNP 207
K+Y+ E+Y+ + M G ++ + A F + + R DPLD L +P
Sbjct: 227 KRYSLEAYLSRTMLAVHDGAEDDDELDL----------ARFDRIM--RCCDPLDALMAHP 274
Query: 208 DSVFGKFCRSKYLLLVHPKMEGSFF-GNMDQRNYVMSGGHPRTPFYQAFLKLAKSIWLL- 265
+S F +FCR+KYL V +ME + F N+D R +V GGH RT FY+AF +A+S W L
Sbjct: 275 NSSFARFCRTKYLAAVPSEMEAAMFRNNLDVRAFVSRGGHLRTWFYRAFATMARSAWALQ 334
Query: 266 -----HRLAYSFDPKVKVFQVKKGSDFSEIHMES-VVKNIILDEGAERPKVGLMVMPGFL 319
HR V++ ++GS ++ +M+S V V V PG
Sbjct: 335 VAVTAHRRCCG-RGSVRMLYARRGSRYAAEYMDSVVAAAAADAGRGGGDGVAFTVTPGMK 393
Query: 320 IGTSVIQSRVYLS 332
+G +++ RV+L
Sbjct: 394 VGETMVACRVFLC 406
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.134 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,344,848
Number of extensions: 322836
Number of successful extensions: 585
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 570
Number of HSP's successfully gapped: 8
Length of query: 338
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 237
Effective length of database: 11,762,187
Effective search space: 2787638319
Effective search space used: 2787638319
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)