Os10g0378400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF641, plant domain containing protein.
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Os10g0378400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF641, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.24 | 0.211 | 12.8 | 0.0766 | 0.325 | 0.547 | 0.192 | 0.955 | 0.0609 | 6.63 | 12.7 | 615 | -- | -- |
| 20.83 | 0.213 | 12.8 | -0.0844 | 0.346 | 0.58 | -0.00831 | -- | 0.0165 | 6.33 | 7.867 | 545 | -- | -- |
| 20.31 | 0.21 | 12.8 | 0.057 | 0.325 | 0.542 | -- | 0.815 | 0.0547 | 6.54 | 12.8 | 608 | -- | -- |
| 20.8 | 0.212 | 12.8 | -0.084 | 0.327 | 0.56 | -- | -- | 0.017 | 6.47 | 13.47 | 584 | -- | -- |
| 22.64 | 0.222 | 12.8 | 0.199 | -- | 0.351 | -- | 1.14 | 0.112 | -- | 10.39 | 2857 | -- | -- |
| 24.46 | 0.232 | 12.8 | 0.0495 | 0.189 | -- | -0.14 | -- | 0.101 | 5.74 | -- | -- | -- | -- |
| 24.51 | 0.232 | 12.8 | 0.0488 | 0.188 | -- | -- | -- | 0.102 | 5.8 | -- | -- | -- | -- |
| 23.24 | 0.225 | 12.8 | -0.0783 | -- | 0.427 | -- | -- | 0.0283 | -- | 11.29 | 1304 | -- | -- |
| 20.97 | 0.213 | 12.8 | -- | 0.318 | 0.521 | -- | -- | 0.0312 | 6.42 | 13.35 | 573 | -- | -- |
| 26.35 | 0.24 | 12.8 | 0.0546 | -- | -- | -- | -- | 0.106 | -- | -- | -- | -- | -- |
| 24.57 | 0.232 | 12.8 | -- | 0.189 | -- | -- | -- | 0.0961 | 5.79 | -- | -- | -- | -- |
| 23.38 | 0.225 | 12.8 | -- | -- | 0.394 | -- | -- | 0.0418 | -- | 10.51 | 1300 | -- | -- |
| 26.42 | 0.24 | 12.8 | -- | -- | -- | -- | -- | 0.0999 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.82 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 22 |
| 2 | 18.86 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 3 | 18.88 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 4 | 18.92 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 5 | 18.99 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 11 | 19.22 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 19 | 19.36 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 5 |
| 37 | 19.52 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 21 |
| 39 | 19.54 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 22 | 2 |
| 53 | 19.59 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 55 | 19.60 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 5 |
| 56 | 19.60 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 3 |
| 73 | 19.66 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 2 | 14 |
| 81 | 19.69 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 12 |
| 83 | 19.70 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 99 | 19.75 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 113 | 19.78 | temperature | 30.0 | 720 | < th | dose independent | rect. | 9 | 3 |
| 127 | 19.81 | temperature | 30.0 | 720 | > th | dose independent | rect. | 11 | 3 |
| 151 | 19.86 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 6 |
| 156 | 19.87 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 171 | 19.89 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 7 |
| 180 | 19.90 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 185 | 19.91 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 5 |
| 192 | 19.92 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 227 | 19.95 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 228 | 19.95 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 234 | 19.96 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 10 |
| 240 | 19.97 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 251 | 19.98 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 255 | 19.98 | wind | 9.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 263 | 19.99 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 279 | 19.99 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 16 | NA |
| 288 | 19.99 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 13 |
| 295 | 19.99 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 18 |
| 307 | 20.00 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 11 |
| 347 | 20.02 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 397 | 20.06 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 420 | 20.07 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 2 | 7 |
| 456 | 20.09 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 3 | 5 |
| 473 | 20.10 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 501 | 20.11 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 9 |
| 517 | 20.12 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 12 | NA |
| 518 | 20.12 | temperature | 15.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 628 | 20.16 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 17 | 10 |
| 642 | 20.17 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 6 |
| 681 | 20.18 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 20 |
| 693 | 20.18 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 20 | 6 |
| 745 | 20.19 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 746 | 20.20 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 747 | 20.20 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 749 | 20.20 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 755 | 20.20 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 16 | 8 |
| 758 | 20.20 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 12 |
| 760 | 20.20 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 782 | 20.20 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 9 | 21 |
| 801 | 20.21 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 833 | 20.22 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 881 | 20.23 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 968 | 20.24 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 9 |