BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0378400 Os10g0378400|AK059720
(338 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G45260.1 | chr2:18664661-18665938 REVERSE LENGTH=426 390 e-109
AT3G14870.1 | chr3:5004159-5005586 FORWARD LENGTH=476 206 2e-53
AT1G53380.1 | chr1:19913341-19914702 REVERSE LENGTH=454 201 6e-52
AT4G34080.1 | chr4:16326985-16327797 FORWARD LENGTH=271 186 2e-47
AT3G60680.1 | chr3:22430246-22431745 FORWARD LENGTH=500 179 1e-45
AT1G29300.1 | chr1:10248120-10249499 REVERSE LENGTH=460 174 5e-44
AT4G33320.1 | chr4:16057038-16057916 REVERSE LENGTH=293 169 1e-42
AT5G58960.1 | chr5:23805799-23808360 FORWARD LENGTH=560 157 1e-38
AT2G30380.1 | chr2:12948284-12950573 FORWARD LENGTH=520 105 3e-23
AT5G12900.1 | chr5:4072151-4074445 REVERSE LENGTH=563 61 8e-10
AT1G12330.1 | chr1:4194673-4196627 FORWARD LENGTH=506 60 1e-09
>AT2G45260.1 | chr2:18664661-18665938 REVERSE LENGTH=426
Length = 425
Score = 390 bits (1001), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/310 (61%), Positives = 225/310 (72%), Gaps = 6/310 (1%)
Query: 30 QNLLKTYEVMVKKFQSQIQTRDTEITHLQQQIDEAXXXXXXXXXXXXQRGLLNKXXXXXX 89
Q+LLKTYEVMVKKFQS+IQ +D+EIT + Q+I+EA RG+
Sbjct: 115 QSLLKTYEVMVKKFQSEIQNKDSEITQMLQKIEEANQKRLKLEKNLKLRGMSTNEGSNGD 174
Query: 90 XXXNYFSIELTPSLFTSAVDNAYQSIHDFSKPLINMMKXXXXXXXXXXXXIEPAVVYTRR 149
+ +LT L+ S + A +++HDFSKPLINMMK IEP VVY +R
Sbjct: 175 GNMQF--PDLTTELYVSTYEAAAKAVHDFSKPLINMMKAAGWDLDSAANSIEPDVVYAKR 232
Query: 150 AHKKYAFESYICQRMFGGFQEESFSVKAANITV----SNEAFFHQFLAVRAMDPLDVLSQ 205
HKKYAFESYICQRMF GFQ+++FSV + + V + FF QFLA++ MDPLD L
Sbjct: 233 PHKKYAFESYICQRMFSGFQQKNFSVNSESAAVMANDDTDTFFRQFLALKDMDPLDALGT 292
Query: 206 NPDSVFGKFCRSKYLLLVHPKMEGSFFGNMDQRNYVMSGGHPRTPFYQAFLKLAKSIWLL 265
NPDS FG FCRSKYLLLVHPKME SFFGN+DQR+YV GGHPRT FYQAFLKLAKSIW+L
Sbjct: 293 NPDSNFGIFCRSKYLLLVHPKMEASFFGNLDQRDYVTGGGHPRTAFYQAFLKLAKSIWIL 352
Query: 266 HRLAYSFDPKVKVFQVKKGSDFSEIHMESVVKNIILDEGAERPKVGLMVMPGFLIGTSVI 325
HRLAYSFDP K+FQVKKGS+FS+ +MESVVKNI++DE E P+VGLMVMPGF IG SVI
Sbjct: 353 HRLAYSFDPAAKIFQVKKGSEFSDSYMESVVKNIVVDEKEENPRVGLMVMPGFWIGGSVI 412
Query: 326 QSRVYLSGVK 335
QSRVY+SGVK
Sbjct: 413 QSRVYVSGVK 422
>AT3G14870.1 | chr3:5004159-5005586 FORWARD LENGTH=476
Length = 475
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/311 (36%), Positives = 169/311 (54%), Gaps = 13/311 (4%)
Query: 30 QNLLKTYEVMVKKFQSQIQTRDTEITHLQQQIDEAXXXXXXXXXXXXQRGLLNKXXXXXX 89
+++LKTYE+M KK + Q++ +D+EI L+++ E+ Q G L
Sbjct: 161 RSVLKTYEIMGKKLECQLKLKDSEIIFLKEKFQESMTQNKLMEKRLNQSGQL-----CNP 215
Query: 90 XXXNYFSIELTPSLFTSAVDNAYQSIHDFSKPLINMMKXXXXXXXXXXXXIEPAVVYTRR 149
N ++ + F + + + +SI F K ++ MK I+P V+Y ++
Sbjct: 216 LDHNLHLSAVSSTHFVTYLHHTVKSIRGFVKLMVEQMKLAAWDIDMAAELIQPDVLYYKQ 275
Query: 150 AHKKYAFESYICQRMFGGFQEESFSVKAANITVSNEA--FFHQFLAVRAMDPLDVLSQNP 207
HK +A E Y+C+ M FQ FS +++ T + FF +F +R+M P + L+ P
Sbjct: 276 DHKCFALEHYVCKIMLEAFQLPYFSNESSKKTSREDKAMFFERFTELRSMKPREYLASRP 335
Query: 208 DSVFGKFCRSKYLLLVHPKMEGSFFGNMDQRNYVMSGGHPRTPFYQAFLKLAKSIWLLHR 267
S KFCR+KYL L+HPKME +FFG++ QRN V +G P T AFL++AK +WLLH
Sbjct: 336 KSRLAKFCRTKYLQLIHPKMEQAFFGHLHQRNQVTAGEFPETSLCTAFLEMAKRVWLLHC 395
Query: 268 LAYSFDPKVKVFQVKKGSDFSEIHMESVVKNIILDEGAERPK------VGLMVMPGFLIG 321
LA+SFDP+ +FQV +G FSE++M+SV + E V V+PGF IG
Sbjct: 396 LAFSFDPEASIFQVSRGCRFSEVYMKSVSEEAFFSPEQEESSSETEPGVAFTVVPGFRIG 455
Query: 322 TSVIQSRVYLS 332
+ IQ VYLS
Sbjct: 456 KTTIQCEVYLS 466
>AT1G53380.1 | chr1:19913341-19914702 REVERSE LENGTH=454
Length = 453
Score = 201 bits (510), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 113/315 (35%), Positives = 162/315 (51%), Gaps = 18/315 (5%)
Query: 30 QNLLKTYEVMVKKFQSQIQTRDTEITHLQQQIDEAXXXXXXXXXXXXQRGLLNKXXXXXX 89
++LLKTYE+M KK +SQ + +D+EI L++++DE+ Q G L
Sbjct: 143 RSLLKTYEIMGKKLESQYKLKDSEIIFLREKLDESMKQNKLTEKRLNQSGQL------CN 196
Query: 90 XXXNYFSIELTPSLFTSAVDNAYQSIHDFSKPLINMMKXXXXXXXXXXXXIEPAVVYTRR 149
N L P+ F + + + +S F K +I MK I P V Y ++
Sbjct: 197 PLDNLHLSALNPTHFVTYLHHTVKSTRGFVKLMIEQMKLAGWDISSAANSIHPGVFYYKQ 256
Query: 150 AHKKYAFESYICQRMFGGFQEESFSV--------KAANITVSNEAFFHQFLAVRAMDPLD 201
HK + FE ++ MF F FS K E FF +F +R+M D
Sbjct: 257 DHKCFTFEHFVSNVMFEAFHLPYFSTSSESRSYKKKKQSNADREMFFERFKELRSMKAKD 316
Query: 202 VLSQNPDSVFGKFCRSKYLLLVHPKMEGSFFGNMDQRNYVMSGGHPRTPFYQAFLKLAKS 261
L+ P S F +FCR+KYL L+HPKME +FFG++ RN V +G P T + FL++AK
Sbjct: 317 YLTARPKSRFARFCRAKYLQLIHPKMEQAFFGHLHLRNQVSAGEFPETSLFSGFLEMAKR 376
Query: 262 IWLLHRLAYSFDPKVKVFQVKKGSDFSEIHMESVVKNIILDEG----AERPKVGLMVMPG 317
IWLLH LA SF+ + ++F+V KG FSE++M+SV + P+V V+PG
Sbjct: 377 IWLLHCLALSFEREAEIFRVPKGCRFSEVYMKSVAEEAFFPAAESSPESEPRVAFTVVPG 436
Query: 318 FLIGTSVIQSRVYLS 332
F IG + IQ VYLS
Sbjct: 437 FRIGKTSIQCEVYLS 451
>AT4G34080.1 | chr4:16326985-16327797 FORWARD LENGTH=271
Length = 270
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 120/193 (62%), Gaps = 6/193 (3%)
Query: 30 QNLLKTYEVMVKKFQSQIQTRDTEITHLQQQIDEAXXXXXXXXXXXXQRGLLNKXXXXXX 89
Q+LLKTYEVMVKKFQS+IQ +D+EIT + Q+I+EA RG+
Sbjct: 80 QSLLKTYEVMVKKFQSEIQNKDSEITQMLQKIEEANQKRLKLEKNLKLRGMSTNQGSGGD 139
Query: 90 XXXNYFSIELTPSLFTSAVDNAYQSIHDFSKPLINMMKXXXXXXXXXXXXIEPAVVYTRR 149
+ +LT LF S + A + +HDFSKPLINMMK IEP VVY +R
Sbjct: 140 GNLQF--PDLTTELFVSTYEAAAKVVHDFSKPLINMMKAAGWDLDTAANSIEPDVVYAKR 197
Query: 150 AHKKYAFESYICQRMFGGFQEESFSVKAANITV----SNEAFFHQFLAVRAMDPLDVLSQ 205
HK+YAFESYICQRMF GFQ+++FSV + + TV + FF QFLA++ MDPLD L
Sbjct: 198 PHKEYAFESYICQRMFSGFQQKNFSVNSESATVMADDDTDTFFRQFLALKDMDPLDALGT 257
Query: 206 NPDSVFGKFCRSK 218
NPDS FG FCRSK
Sbjct: 258 NPDSNFGIFCRSK 270
>AT3G60680.1 | chr3:22430246-22431745 FORWARD LENGTH=500
Length = 499
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 160/312 (51%), Gaps = 21/312 (6%)
Query: 29 NQNLLKTYEVMVKKFQSQIQTRDTEITHLQQQIDEAXXXXXXXXXXXXQRGLLNKXXXXX 88
NQ+ L+ E + + Q+++ +D ++ L+ ++ E L+
Sbjct: 198 NQSKLRALETVSNRLQAEMDAKDLQVWSLRNKLGEIQKSTSKLSKRLSSNSSLD------ 251
Query: 89 XXXXNYFSIELTPSLFTSAVDNAYQSIHDFSKPLINMMKXXXXXXXXXXXXIEPAVVYTR 148
+ L+ +F S + +A+++ F+K LI +M+ + P V Y +
Sbjct: 252 --------VLLSVRVFESLLYDAFKATQKFTKILIELMEKAGWDLDLVAKSVHPEVDYAK 303
Query: 149 RAHKKYAFESYICQRMFGGFQEESFSVKAANITVSN----EAFFHQFLAVRAMDPLDVLS 204
H +YA SY+C MF GF E F + + S ++ + + + +P+++L
Sbjct: 304 ERHNRYALLSYVCLGMFRGFDGEGFDLNENDYEESERSSVDSSLRELMQHVSSNPMELLD 363
Query: 205 QNPDSVFGKFCRSKYLLLVHPKMEGSFFGNMDQRNYVMSGGHPRTPFYQAFLKLAKSIWL 264
++ D F +FC KY L+HP M S F NMD+ V+S + FY++F+ +A SIW
Sbjct: 364 RDKDCAFSRFCDKKYHELIHPNMASSIFSNMDENEAVLSSWRSLSTFYESFVTMASSIWT 423
Query: 265 LHRLAYSFDPKVKVFQVKKGSDFSEIHMESVVK---NIILDEGAERPKVGLMVMPGFLIG 321
LH+LA SFDP V++FQV+ G +FS + ME+V+K + R KVG V+PGF IG
Sbjct: 424 LHKLALSFDPAVEIFQVESGVEFSIVFMENVLKRKQDKKFSMSPTRAKVGFTVVPGFKIG 483
Query: 322 TSVIQSRVYLSG 333
+VIQ +VYL+G
Sbjct: 484 CTVIQCQVYLTG 495
>AT1G29300.1 | chr1:10248120-10249499 REVERSE LENGTH=460
Length = 459
Score = 174 bits (441), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 161/316 (50%), Gaps = 33/316 (10%)
Query: 30 QNLLKTYEVMVKKFQSQIQTRDTEITHLQQQIDEAXXXXXXXXXXXXQRGLLNKXXXXXX 89
Q+L++TYE+ +KK + ++ + +I L+ +E+ L K
Sbjct: 161 QSLMRTYEITIKKLEFEVTEKQLKIDELKMSFEESLVVNKS----------LEKKLSASG 210
Query: 90 XXXNYFSIE---LTPSLFTSAVDNAYQSIHDFSKPLINMMKXXXXXXXXXXXXI------ 140
+ +IE L S F + +S+ F K ++ M+
Sbjct: 211 SVSVFDNIEIRNLNLSSFVQVLGFTLRSVRSFVKLIVKEMESASWDLDAAASAAVSVNVK 270
Query: 141 EPAVVYTRRAHKKYAFESYICQRMFGGFQEESFSVKAANITVSNEAFFHQFLAVRAMDPL 200
+ V+ R +H+ +AFES++C +MF F FS + +F +R++DP+
Sbjct: 271 NASTVFARPSHRCFAFESFVCGKMFENFGAPDFSRR------------EEFEKLRSVDPI 318
Query: 201 DVLSQNPDSVFGKFCRSKYLLLVHPKMEGSFFGNMDQRNYVMSGGHPRTPFYQAFLKLAK 260
L++NP S F +F KYL +VH KME SFFGN++QR V SGG P + F+ F ++AK
Sbjct: 319 QYLTRNPGSSFARFVVHKYLSVVHAKMECSFFGNLNQRKLVNSGGFPDSGFFATFCEMAK 378
Query: 261 SIWLLHRLAYSFDPKVKVFQVKKGSDFSEIHMESVVKN--IILDEGAERPKVGLMVMPGF 318
IWLLH LA+S V VFQ+K+G FS+++MESV + +VG V+PGF
Sbjct: 379 RIWLLHCLAFSLSGNVTVFQLKRGCRFSQVYMESVKSGDESLFSGDNSDIRVGFTVVPGF 438
Query: 319 LIGTSVIQSRVYLSGV 334
IG +VIQS+VYL+ V
Sbjct: 439 KIGENVIQSQVYLTPV 454
>AT4G33320.1 | chr4:16057038-16057916 REVERSE LENGTH=293
Length = 292
Score = 169 bits (429), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/199 (46%), Positives = 119/199 (59%), Gaps = 7/199 (3%)
Query: 30 QNLLKTY-EVMVKKFQSQIQTRDTEITHLQQQIDEAXXXXXXXXXXXXQRGLLNKXXXXX 88
Q+LLKTY EVMVKKFQS+IQ +D+EIT + Q+I+EA RG+
Sbjct: 91 QSLLKTYYEVMVKKFQSEIQNKDSEITQMLQKIEEANKKRLKLEKNLKLRGMSTNEGSGG 150
Query: 89 XXXXNYFSIELTPSLFTSAVDNAYQSIHDFSKPLINMMKXXXXXXXXXXXXIEPAVVYTR 148
+ +LT LF S + A +++HDFSKPLINMMK IEP VVY +
Sbjct: 151 DGNLQF--PDLTTELFVSTYEVAAKAVHDFSKPLINMMKAAGWDLDSAANSIEPDVVYAK 208
Query: 149 RAHKKYAFESYICQRMFGGFQEESFSVKAANITV----SNEAFFHQFLAVRAMDPLDVLS 204
R HKKYAFESYICQRMF GFQ+++FSV + + TV + FF QFLA++ MDPLD L
Sbjct: 209 RPHKKYAFESYICQRMFSGFQQKNFSVNSESATVMADDDTDTFFRQFLALKDMDPLDALG 268
Query: 205 QNPDSVFGKFCRSKYLLLV 223
NPDS + K ++V
Sbjct: 269 TNPDSNVRLYACQKVFVIV 287
>AT5G58960.1 | chr5:23805799-23808360 FORWARD LENGTH=560
Length = 559
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 137/264 (51%), Gaps = 30/264 (11%)
Query: 95 FSIELTPSLFTSAVDNAYQSIHDFSKPLINMMKXXXXXXXXXXXXIEPAVVYTR------ 148
++ P LF + ++ F+ L+++M+ IE A +
Sbjct: 295 IAVSPVPELFEMTMIQVKEASKSFTGILLSLMRAAHWDIAAAVRSIEAASASSDGMSASS 354
Query: 149 ----------RAHKKYAFESYICQRMFGGFQEESFSVKAANITVSN-----EAFFHQFLA 193
H K+A ESYIC+++F GF E+F + + ++ N F QF
Sbjct: 355 FASSVQSSVPNQHAKFALESYICRKIFQGFDHETFYMDGSLSSLINPDQYRRDCFAQFKD 414
Query: 194 VRAMDPLDVLSQNPDSVFGKFCRSKYLLLVHPKMEGSFFGNMDQRNYVMSGGHPRTPFYQ 253
++AMDP+++L P FGKFC KYL ++H KME S FG+ +QR V++G HPR+ FY
Sbjct: 415 MKAMDPMELLGILPTCHFGKFCSKKYLSIIHQKMEESLFGDSEQRELVVAGNHPRSQFYG 474
Query: 254 AFLKLAKSIWLLHRLAYSFDPKVKVFQVKKGSDFSEIHMESVVKNIILDEG--AERPKVG 311
FL LAK++WLLH LA+S DP F+ +G++F +MESVV+ +G VG
Sbjct: 475 EFLGLAKAVWLLHLLAFSLDPSPSHFEANRGAEFHSQYMESVVR---FSDGRVPAGQVVG 531
Query: 312 LMVMPGFLIG----TSVIQSRVYL 331
V PGF + S+I+SRVYL
Sbjct: 532 FPVCPGFKLSHQGKGSIIKSRVYL 555
>AT2G30380.1 | chr2:12948284-12950573 FORWARD LENGTH=520
Length = 519
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 75/143 (52%), Gaps = 15/143 (10%)
Query: 102 SLFTSAVDNAYQSIHDFSKPLINMMKXXXXXXXXXXXXIEPAVVYTRRAHKKYAFESYIC 161
S F A A +S+HDF+KPLI +MK I V + + + KKYAFESYI
Sbjct: 197 SSFEFAFRAASKSVHDFAKPLITLMKATDWNLEKAVESIVGNVTFAKTSDKKYAFESYIV 256
Query: 162 QRMFGGFQEESFSVKAANITVSNEAFFHQFLAVRAMDPLDVLSQNPDSVFGKFCRSKYLL 221
+RMF G +K V+ F DPLD L+ DS F +FC KYLL
Sbjct: 257 RRMFHG-------IKLNPCDVTELMSFD--------DPLDALTAFSDSAFSRFCGQKYLL 301
Query: 222 LVHPKMEGSFFGNMDQRNYVMSG 244
+VHP ME SFFGN+D R V+ G
Sbjct: 302 VVHPSMEASFFGNLDMRGLVLLG 324
>AT5G12900.1 | chr5:4072151-4074445 REVERSE LENGTH=563
Length = 562
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 84/194 (43%), Gaps = 41/194 (21%)
Query: 153 KYAFESYICQRMFGGFQEESFSV----KAANITVSNEAFFHQFLAVRAMDPLDVLSQNP- 207
+Y E+ I Q ++ F+ F K + +A F F ++R + +VL +
Sbjct: 385 QYHLEAIISQSVYQDFENCVFQKNGKPKLLDPEQDRQANFSSFASLRNLSWNEVLKKGTK 444
Query: 208 --DSVFGKFCRSKYLLLVHPKMEGSFFGNMDQRNYVMSGGHPRTP-FYQAFLKLAKSIWL 264
F +FC K L++ ++ P + QAF AK +WL
Sbjct: 445 YYSDEFSRFCDEKMSLII----------------TTLNWTRPWSEQMLQAFFVAAKCVWL 488
Query: 265 LHRLAYSFDPKVKVFQVKKGSDFSEIHMESVVKNIILDEGAER---------PKVGLMVM 315
LH LA+SF+P + + +V++ +F ME D GA+R +V +MVM
Sbjct: 489 LHLLAFSFNPALGILRVEENREFESSFME--------DMGADRQRSALSRGPARVKVMVM 540
Query: 316 PGFLIGTSVIQSRV 329
PGF + V++ +V
Sbjct: 541 PGFYVLDRVLRCKV 554
>AT1G12330.1 | chr1:4194673-4196627 FORWARD LENGTH=506
Length = 505
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 250 PFYQAFLKLAKSIWLLHRLAYSFDPKVKVFQVKKGSDFSEIHMESVVKNIILDEGAERPK 309
P QAF +KS+WL+H LA S +P +++F+V+K F I+ME + G ER K
Sbjct: 396 PLLQAFFGASKSVWLVHLLANSVNPGLQIFRVEKDDRFDPIYME--------ETGGERFK 447
Query: 310 --VGLMVMPGFLIGTSVIQSRV 329
V MV PGF + SV++ +V
Sbjct: 448 SLVRAMVQPGFYVYGSVVKCKV 469
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.134 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,376,418
Number of extensions: 234538
Number of successful extensions: 539
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 517
Number of HSP's successfully gapped: 11
Length of query: 338
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 239
Effective length of database: 8,392,385
Effective search space: 2005780015
Effective search space used: 2005780015
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)