Os01g0823700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF641, plant domain containing protein.
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Os01g0823700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF641, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 395.29 | 0.934 | 6.84 | 0.699 | 0.534 | 1.96 | 1.9 | -0.066 | 0.0722 | 23.2 | 20 | 200 | -- | -- |
| 395.01 | 0.926 | 6.84 | 0.74 | 0.561 | 1.95 | 1.93 | -- | 0.0792 | 23.3 | 20.03 | 174 | -- | -- |
| 409.63 | 0.943 | 6.85 | 0.628 | 0.546 | 2.08 | -- | -0.0643 | 0.0747 | 23.6 | 19.9 | 186 | -- | -- |
| 409.65 | 0.943 | 6.84 | 0.591 | 0.544 | 2.08 | -- | -- | 0.0648 | 23.7 | 19.85 | 186 | -- | -- |
| 426 | 0.961 | 6.84 | 0.605 | -- | 1.98 | -- | -0.0701 | 0.0769 | -- | 19.86 | 229 | -- | -- |
| 517.29 | 1.07 | 6.76 | 1.32 | 0.361 | -- | 2.33 | -- | 0.41 | 21.8 | -- | -- | -- | -- |
| 537.66 | 1.09 | 6.77 | 1.23 | 0.366 | -- | -- | -- | 0.408 | 21 | -- | -- | -- | -- |
| 426.09 | 0.961 | 6.83 | 0.594 | -- | 1.99 | -- | -- | 0.076 | -- | 19.87 | 229 | -- | -- |
| 417.58 | 0.952 | 6.86 | -- | 0.541 | 2.25 | -- | -- | -0.0239 | 23.9 | 19.86 | 209 | -- | -- |
| 545.33 | 1.09 | 6.76 | 1.24 | -- | -- | -- | -- | 0.405 | -- | -- | -- | -- | -- |
| 577.86 | 1.12 | 6.8 | -- | 0.365 | -- | -- | -- | 0.27 | 21.2 | -- | -- | -- | -- |
| 434.56 | 0.971 | 6.85 | -- | -- | 2.16 | -- | -- | -0.0138 | -- | 19.88 | 242 | -- | -- |
| 585.58 | 1.13 | 6.79 | -- | -- | -- | -- | -- | 0.268 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 383.12 | temperature | 20.0 | 270 | < th | dose independent | rect. | 11 | 20 |
| 26 | 391.94 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 23 |
| 57 | 397.02 | temperature | 20.0 | 270 | > th | dose independent | rect. | 16 | 23 |
| 58 | 397.05 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 69 | 399.19 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 23 |
| 85 | 400.76 | temperature | 20.0 | 270 | > th | dose independent | no | NA | NA |
| 88 | 401.04 | temperature | 20.0 | 270 | < th | dose independent | no | NA | NA |
| 93 | 402.12 | temperature | 20.0 | 270 | < th | dose independent | rect. | 21 | 23 |
| 102 | 402.88 | temperature | 20.0 | 270 | < th | dose independent | sin | 12 | NA |
| 105 | 403.12 | temperature | 20.0 | 270 | < th | dose independent | rect. | 19 | 23 |
| 120 | 404.06 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 15 | 2 |
| 123 | 404.34 | temperature | 20.0 | 270 | < th | dose independent | rect. | 3 | 23 |
| 128 | 404.74 | temperature | 20.0 | 270 | < th | dose independent | rect. | 1 | 23 |
| 164 | 406.78 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 11 |
| 169 | 406.97 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 181 | 407.16 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 185 | 407.47 | temperature | 20.0 | 270 | > th | dose independent | sin | 13 | NA |
| 190 | 407.63 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 200 | 407.97 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 8 |
| 201 | 408.01 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 203 | 408.07 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 225 | 408.71 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 13 |
| 227 | 408.77 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 13 |
| 229 | 408.77 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 13 |
| 236 | 409.15 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 11 |
| 239 | 409.30 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 23 |
| 253 | 409.56 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 278 | 410.22 | temperature | 20.0 | 720 | < th | dose independent | rect. | 9 | 15 |
| 303 | 410.77 | temperature | 20.0 | 270 | > th | dose independent | rect. | 10 | 23 |
| 314 | 410.90 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 3 | 13 |
| 326 | 411.06 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 348 | 411.44 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 3 | 13 |
| 366 | 411.62 | temperature | 20.0 | 720 | < th | dose independent | rect. | 14 | 10 |
| 382 | 411.88 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 23 |
| 394 | 412.07 | temperature | 25.0 | 43200 | > th | dose independent | sin | 2 | NA |
| 445 | 412.63 | temperature | 25.0 | 43200 | < th | dose independent | sin | 2 | NA |
| 478 | 413.01 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 484 | 413.07 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 12 | 6 |
| 501 | 413.24 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 9 |
| 506 | 413.31 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 9 |
| 507 | 413.31 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 9 |
| 509 | 413.33 | temperature | 20.0 | 720 | > th | dose independent | rect. | 9 | 17 |
| 511 | 413.34 | wind | 1.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 542 | 413.67 | temperature | 20.0 | 720 | > th | dose independent | rect. | 8 | 15 |
| 561 | 413.88 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 611 | 414.42 | humidity | 70.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 615 | 414.46 | humidity | 70.0 | 43200 | < th | dose independent | sin | 10 | NA |
| 623 | 414.52 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 673 | 414.93 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 680 | 414.98 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 728 | 415.34 | temperature | 20.0 | 43200 | > th | dose dependent | sin | 2 | NA |
| 745 | 415.45 | temperature | 20.0 | 720 | > th | dose independent | rect. | 16 | 7 |
| 747 | 415.45 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 20 | 19 |
| 779 | 415.77 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 783 | 415.80 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 790 | 415.84 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 7 | 11 |
| 793 | 415.86 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 917 | 416.57 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 944 | 416.73 | temperature | 20.0 | 720 | > th | dose independent | sin | 18 | NA |
| 960 | 416.81 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 7 | 5 |
| 966 | 416.83 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 8 | 3 |