Os03g0825600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0825600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 192.56 | 0.652 | 8.27 | -1.36 | 3.38 | 2.32 | 0.255 | -5.46 | -0.138 | 9 | 24.56 | 1385 | -- | -- |
| 204.22 | 0.666 | 8.12 | 0.11 | 3.42 | 1.97 | 0.697 | -- | 0.0648 | 8.96 | 21.54 | 1374 | -- | -- |
| 192.39 | 0.646 | 8.24 | -1.06 | 3.39 | 2.19 | -- | -4.2 | -0.15 | 8.99 | 23.64 | 1396 | -- | -- |
| 203.34 | 0.664 | 8.12 | 0.121 | 3.35 | 1.88 | -- | -- | 0.0793 | 8.94 | 21.66 | 1427 | -- | -- |
| 836.79 | 1.35 | 8.34 | -1.04 | -- | 2.07 | -- | -3.93 | -0.17 | -- | 22.96 | 1444 | -- | -- |
| 329.28 | 0.851 | 8.02 | 0.792 | 3.33 | -- | 0.244 | -- | 0.522 | 8.77 | -- | -- | -- | -- |
| 329.48 | 0.85 | 8.02 | 0.8 | 3.33 | -- | -- | -- | 0.522 | 8.76 | -- | -- | -- | -- |
| 843.63 | 1.35 | 8.21 | 0.136 | -- | 1.8 | -- | -- | 0.117 | -- | 21.53 | 1464 | -- | -- |
| 203.67 | 0.665 | 8.12 | -- | 3.35 | 1.91 | -- | -- | 0.0633 | 8.94 | 21.71 | 1427 | -- | -- |
| 960.14 | 1.45 | 8.11 | 0.805 | -- | -- | -- | -- | 0.548 | -- | -- | -- | -- | -- |
| 346.36 | 0.871 | 8.04 | -- | 3.34 | -- | -- | -- | 0.432 | 8.75 | -- | -- | -- | -- |
| 844.08 | 1.35 | 8.21 | -- | -- | 1.85 | -- | -- | 0.0933 | -- | 21.4 | 1465 | -- | -- |
| 977.23 | 1.46 | 8.13 | -- | -- | -- | -- | -- | 0.458 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 180.58 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 76 | 187.19 | temperature | 25 | 1440 | > th | dose dependent | sin | 18 | NA |
| 141 | 190.49 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 156 | 191.02 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 169 | 191.37 | temperature | 15 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 201 | 191.99 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 21 |
| 205 | 192.07 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 19 |
| 379 | 193.90 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 411 | 194.16 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 475 | 195.23 | temperature | 10 | 1440 | > th | dose dependent | sin | 20 | NA |
| 493 | 195.48 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 21 |
| 834 | 199.35 | wind | 9 | 43200 | > th | dose dependent | rect. | 14 | 13 |
| 840 | 199.43 | wind | 9 | 43200 | > th | dose dependent | rect. | 14 | 16 |
| 878 | 199.79 | wind | 9 | 43200 | > th | dose dependent | rect. | 14 | 11 |
| 949 | 200.48 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 963 | 200.66 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 964 | 200.68 | temperature | 15 | 10 | > th | dose dependent | rect. | 4 | 21 |
| 990 | 200.94 | wind | 7 | 43200 | > th | dose dependent | sin | 16 | NA |