Os05g0206600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF641, plant domain containing protein.
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Os05g0206600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF641, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 127.13 | 0.53 | 12 | -1.22 | 2.18 | 1.66 | 0.653 | -3.1 | -0.943 | 20 | 23.61 | 626 | -- | -- |
| 129.38 | 0.53 | 12 | -0.678 | 2.26 | 1.41 | 0.182 | -- | -0.831 | 20.2 | 22.3 | 528 | -- | -- |
| 127.96 | 0.527 | 12 | -1.06 | 2.18 | 1.62 | -- | -2.07 | -0.906 | 20.1 | 23.42 | 581 | -- | -- |
| 129.46 | 0.53 | 12 | -0.686 | 2.26 | 1.42 | -- | -- | -0.829 | 20.2 | 22.43 | 529 | -- | -- |
| 297.47 | 0.803 | 12.1 | -2.14 | -- | 3.7 | -- | -6.65 | -1.28 | -- | 24.3 | 610 | -- | -- |
| 167.02 | 0.606 | 11.9 | -0.349 | 2.8 | -- | 0.606 | -- | -0.604 | 19.9 | -- | -- | -- | -- |
| 168.09 | 0.607 | 11.9 | -0.365 | 2.8 | -- | -- | -- | -0.604 | 19.9 | -- | -- | -- | -- |
| 316.46 | 0.829 | 11.9 | -1.02 | -- | 3.11 | -- | -- | -0.958 | -- | 24.2 | 598 | -- | -- |
| 140.89 | 0.553 | 12 | -- | 2.3 | 1.24 | -- | -- | -0.712 | 20.1 | 23.29 | 529 | -- | -- |
| 592.69 | 1.14 | 11.9 | -0.397 | -- | -- | -- | -- | -0.642 | -- | -- | -- | -- | -- |
| 171.61 | 0.613 | 11.9 | -- | 2.8 | -- | -- | -- | -0.563 | 19.9 | -- | -- | -- | -- |
| 342.25 | 0.862 | 11.9 | -- | -- | 2.93 | -- | -- | -0.821 | -- | 24.3 | 586 | -- | -- |
| 596.84 | 1.14 | 11.9 | -- | -- | -- | -- | -- | -0.598 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.28 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 15 |
| 30 | 119.97 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 13 |
| 34 | 120.47 | temperature | 20 | 270 | > th | dose dependent | sin | 16 | NA |
| 51 | 121.25 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 10 |
| 55 | 121.39 | temperature | 30 | 270 | < th | dose dependent | sin | 18 | NA |
| 71 | 121.93 | temperature | 25 | 270 | > th | dose independent | rect. | 13 | 7 |
| 146 | 124.59 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 9 |
| 147 | 124.59 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 15 |
| 173 | 124.96 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 10 |
| 178 | 125.02 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 16 |
| 193 | 125.25 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 9 |
| 223 | 125.80 | temperature | 20 | 90 | > th | dose dependent | rect. | 15 | 8 |
| 248 | 126.07 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 16 |
| 262 | 126.39 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 6 |
| 303 | 126.90 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 12 |
| 309 | 126.96 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 14 |
| 333 | 127.21 | temperature | 25 | 720 | > th | dose independent | rect. | 4 | 18 |
| 345 | 127.34 | temperature | 25 | 720 | < th | dose independent | rect. | 4 | 18 |
| 357 | 127.42 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 7 |
| 400 | 127.83 | temperature | 25 | 270 | < th | dose independent | rect. | 15 | 8 |
| 406 | 127.90 | temperature | 10 | 720 | > th | dose dependent | sin | 21 | NA |
| 428 | 128.10 | temperature | 30 | 720 | < th | dose dependent | sin | 22 | NA |
| 472 | 128.45 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 22 |
| 481 | 128.50 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 9 |
| 594 | 129.14 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 20 |
| 649 | 129.44 | temperature | 25 | 270 | < th | dose independent | rect. | 9 | 15 |
| 655 | 129.46 | temperature | 25 | 720 | > th | dose independent | sin | 21 | NA |
| 664 | 129.48 | temperature | 10 | 90 | > th | dose dependent | rect. | 1 | 22 |
| 669 | 129.48 | temperature | 25 | 720 | > th | dose dependent | rect. | 22 | 23 |
| 700 | 129.60 | temperature | 25 | 720 | > th | dose dependent | no | NA | NA |
| 874 | 130.04 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 16 |
| 893 | 130.09 | temperature | 25 | 10 | > th | dose independent | rect. | 15 | 8 |
| 951 | 130.35 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 1 |