BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0563700 Os09g0563700|AK106611
(710 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0563700 Conserved hypothetical protein 1449 0.0
Os06g0227200 Conserved hypothetical protein 115 2e-25
Os02g0745600 Conserved hypothetical protein 107 3e-23
Os05g0164900 Galactose oxidase, central domain containing p... 104 2e-22
Os01g0165200 STAT protein family protein 93 7e-19
Os05g0498700 Similar to Gda-1 protein 92 9e-19
Os05g0594100 Similar to GDA2 protein 92 1e-18
Os11g0525700 Conserved hypothetical protein 90 7e-18
Os01g0550300 Similar to Gda-1 protein 89 1e-17
Os06g0174350 Conserved hypothetical protein 81 3e-15
>Os09g0563700 Conserved hypothetical protein
Length = 710
Score = 1449 bits (3751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 694/710 (97%), Positives = 694/710 (97%)
Query: 1 MRQELVKRSFREDASMAGAIFMSNTATRELCFRSNIFGLPIEYQPFVRNIRQGMPLFLFD 60
MRQELVKRSFREDASMAGAIFMSNTATRELCFRSNIFGLPIEYQPFVRNIRQGMPLFLFD
Sbjct: 1 MRQELVKRSFREDASMAGAIFMSNTATRELCFRSNIFGLPIEYQPFVRNIRQGMPLFLFD 60
Query: 61 HTERKLYGVFEATSDGGFNIIRSAFSSIGCSYPAQVCFKIIWKCRPLTEDEFSPAIKENY 120
HTERKLYGVFEATSDGGFNIIRSAFSSIGCSYPAQVCFKIIWKCRPLTEDEFSPAIKENY
Sbjct: 61 HTERKLYGVFEATSDGGFNIIRSAFSSIGCSYPAQVCFKIIWKCRPLTEDEFSPAIKENY 120
Query: 121 YMPWKFYFDLSYQQVVCLYQLFDEKRVEHPIHNHSKSANLENDPFRKGTQERKSLSPNIP 180
YMPWKFYFDLSYQQVVCLYQLFDEKRVEHPIHNHSKSANLENDPFRKGTQERKSLSPNIP
Sbjct: 121 YMPWKFYFDLSYQQVVCLYQLFDEKRVEHPIHNHSKSANLENDPFRKGTQERKSLSPNIP 180
Query: 181 HFPADQPGLFMPASTPRFSTVEASYCASTSMHQAPHPNMSMPLGTNPFGVQIAPVHNSHH 240
HFPADQPGLFMPASTPRFSTVEASYCASTSMHQAPHPNMSMPLGTNPFGVQIAPVHNSHH
Sbjct: 181 HFPADQPGLFMPASTPRFSTVEASYCASTSMHQAPHPNMSMPLGTNPFGVQIAPVHNSHH 240
Query: 241 DQAELPYNNNMLFPGYLPSGHVARDTTQELGLSANHSYPPSMGYAYGCLPPPGHRPQDAI 300
DQAELPYNNNMLFPGYLPSGHVARDTTQELGLSANHSYPPSMGYAYGCLPPPGHRPQDAI
Sbjct: 241 DQAELPYNNNMLFPGYLPSGHVARDTTQELGLSANHSYPPSMGYAYGCLPPPGHRPQDAI 300
Query: 301 AGDVNYAPPYPQFPLPNEQGSATNRRDYYDVHCKQCQFEDIYESEHQHFSKAKVLAPPIL 360
AGDVNYAPPYPQFPLPNEQGSATNRRDYYDVHCKQCQFEDIYESEHQHFSKAKVLAPPIL
Sbjct: 301 AGDVNYAPPYPQFPLPNEQGSATNRRDYYDVHCKQCQFEDIYESEHQHFSKAKVLAPPIL 360
Query: 361 NQQDVPVYPAIAESAFDQRKECFTEEDSENARQKQSFNHTDMVFSGLGNSNRAYMPDHLN 420
NQQDVPVYPAIAESAFDQRKECFTEEDSENARQKQSFNHTDMVFSGLGNSNRAYMPDHLN
Sbjct: 361 NQQDVPVYPAIAESAFDQRKECFTEEDSENARQKQSFNHTDMVFSGLGNSNRAYMPDHLN 420
Query: 421 KNPDIRSESNTIAVGQHAQSSVFSRLSRIPPPLHQEIPGPSLNKLVLSLSQRAEHWGNQD 480
KNPDIRSESNTIAVGQHAQSSVFSRLSRIPPPLHQEIPGPSLNKLVLSLSQRAEHWGNQD
Sbjct: 421 KNPDIRSESNTIAVGQHAQSSVFSRLSRIPPPLHQEIPGPSLNKLVLSLSQRAEHWGNQD 480
Query: 481 KIITNDVCEQLVSEQVMDTPYPLAELNQQSGLIEEEIEGLAFMNFKRRSETRNLDANLGK 540
KIITNDVCEQLVSEQVMDTPYPLAELNQQSGLIEEEIEGLAFMNFKRRSETRNLDANLGK
Sbjct: 481 KIITNDVCEQLVSEQVMDTPYPLAELNQQSGLIEEEIEGLAFMNFKRRSETRNLDANLGK 540
Query: 541 EIRGQVKRRKLVRPSFGEVNNAGSSGKELEAKVLEGEKHSNDEHDENKFSIDLNKPAAID 600
EIRGQVKRRKLVRPSFGEVNNAGSSGKELEAKVLEGEKHSNDEHDENKFSIDLNKPAAID
Sbjct: 541 EIRGQVKRRKLVRPSFGEVNNAGSSGKELEAKVLEGEKHSNDEHDENKFSIDLNKPAAID 600
Query: 601 GDVAKEDDTTTALPHPSVAIKMHKEKPSEENMSKPNSPNTTEEMKKQDPSLDSATHTEKI 660
GDVAKEDDTTTALPHPSVAIKMHKEKPSEENMSKPNSPNTTEEMKKQDPSLDSATHTEKI
Sbjct: 601 GDVAKEDDTTTALPHPSVAIKMHKEKPSEENMSKPNSPNTTEEMKKQDPSLDSATHTEKI 660
Query: 661 SLELDVADLNTIDXXXXXXXXXXXXXXXXDKLRREKLNNSEEAEEVKIAT 710
SLELDVADLNTID DKLRREKLNNSEEAEEVKIAT
Sbjct: 661 SLELDVADLNTIDQSKLQAILSSSLLQALDKLRREKLNNSEEAEEVKIAT 710
>Os06g0227200 Conserved hypothetical protein
Length = 704
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 79/140 (56%), Gaps = 3/140 (2%)
Query: 11 REDASMAGAIFMSNTATRELCFRSNIFGLPIEYQPFVRNIRQGMPLFLFDHTERKLYGVF 70
R D+ G IFM N T+ CF+S +FG P V IR GM LFL+D + LYGV+
Sbjct: 243 RLDSKGGGLIFMCNAQTKPECFQSRLFGYPRGKIGIVEKIRPGMRLFLYDFDLKLLYGVY 302
Query: 71 EATSDGGFNIIRSAFSSIGCSYPAQVCFKIIWKCRPLTEDEFSPAIKENYYMPWKFYFDL 130
+A S GG +++R AFS +PAQV FKI C PL E F AI+ENY KF +L
Sbjct: 303 KAVSKGGLDLVRDAFSG---KFPAQVKFKIDKDCLPLPESRFKDAIRENYSAKSKFNPEL 359
Query: 131 SYQQVVCLYQLFDEKRVEHP 150
+ +QV L LF+ V P
Sbjct: 360 NSRQVHRLIALFESVSVPQP 379
>Os02g0745600 Conserved hypothetical protein
Length = 488
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 76/132 (57%), Gaps = 3/132 (2%)
Query: 11 REDASMAGAIFMSNTATRELCFRSNIFGLPIEYQPFVRNIRQGMPLFLFDHTERKLYGVF 70
RE AG IFM + T+ CF++ +FGLP V I+ G LFL+D + LYG++
Sbjct: 119 RERKGEAGFIFMCSAKTKPECFQNGVFGLPKGKIDVVEKIQPGAKLFLYDFDLKLLYGIY 178
Query: 71 EATSDGGFNIIRSAFSSIGCSYPAQVCFKIIWKCRPLTEDEFSPAIKENYYMPWKFYFDL 130
+A + GG +++R AF +PAQV FK+ C PL E F AIKENY KF +L
Sbjct: 179 KAKTKGGLDLVRGAFHG---KFPAQVKFKVDKDCLPLPESSFKHAIKENYNSKGKFTQEL 235
Query: 131 SYQQVVCLYQLF 142
S +QV L +LF
Sbjct: 236 SLKQVHRLLELF 247
>Os05g0164900 Galactose oxidase, central domain containing protein
Length = 1049
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 84/142 (59%), Gaps = 8/142 (5%)
Query: 6 VKRSFREDASMAGAIFMSNTATRELCFRSNIFGLPIEYQPFVRNIRQGMPLFLFDHTERK 65
+ R+ RE+ + G IF T E CF +FGLP + +VRN++ G+PLFLF++++RK
Sbjct: 13 LARNLREN-QLGGVIFGCKHNTIEECFEKQLFGLPSVHYSYVRNVKPGLPLFLFNYSDRK 71
Query: 66 LYGVFEATSDGGFNIIRSAFS---SIGCSYPAQVCFKIIWKCR--PLTEDEFSPAIKENY 120
L+G+FEA S G I A+S S+ S+PAQV +I K R PL E +F + +NY
Sbjct: 72 LHGIFEAASPGQMCIDPYAWSHDGSLRTSFPAQV--RICTKTRYPPLMESQFRTVLGDNY 129
Query: 121 YMPWKFYFDLSYQQVVCLYQLF 142
Y FYF+L + Q L +F
Sbjct: 130 YNHHHFYFELDHAQTKALIAVF 151
>Os01g0165200 STAT protein family protein
Length = 700
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 80/147 (54%), Gaps = 14/147 (9%)
Query: 10 FRE--DASMAGAIFMSNTATRELCFRSNIFGLPIEYQPFVRNIRQGMPLFLFDHTERKLY 67
FRE + + G +F N T + CF +FGLP +V+N++ G+PLFLF+++ R+L+
Sbjct: 13 FRELPEKELGGVVFCCNNNTFDECFTKQLFGLPQRNILYVKNVKPGLPLFLFNYSNRQLH 72
Query: 68 GVFEATSDGGFNIIRSAFSSIGCS----------YPAQVCFKIIWKCRPLTEDEFSPAIK 117
G+F+ATS G NI R A+ S + +PAQV F +C PL E ++ I
Sbjct: 73 GIFKATSTGQLNIDRFAWMSEQSNDAKTNAKTTPFPAQVRFSTRTECPPLPESKYKSVII 132
Query: 118 ENYY--MPWKFYFDLSYQQVVCLYQLF 142
NY P F F+L ++Q L LF
Sbjct: 133 NNYRKDKPSHFRFELDHRQTRDLISLF 159
>Os05g0498700 Similar to Gda-1 protein
Length = 314
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 79/136 (58%), Gaps = 6/136 (4%)
Query: 16 MAGAIFMSNTATRELCFRSNIFGLPIEYQPFVRNIRQGMPLFLFDHTERKLYGVFEATSD 75
+ G IF+ N T + + +FGLP Y+ VR I G+PLFL+++T +L+GVFEA+S
Sbjct: 181 LGGYIFVCNNDTMQEDLKRQLFGLPARYRDSVRAIIPGLPLFLYNYTTHQLHGVFEASSF 240
Query: 76 GGFNIIRSAFSSIGCS----YPAQVCFKIIWKCRPLTEDEFSPAIKENYYMPWKFYFDLS 131
GG NI +A+ C +PAQV +I C+PL ED F P + ++Y KF +LS
Sbjct: 241 GGSNIDPTAWEDKKCKGESRFPAQVRIRIRKLCKPLEEDAFRPVL--HHYDGPKFRLELS 298
Query: 132 YQQVVCLYQLFDEKRV 147
+ + L L +++ V
Sbjct: 299 IAETLSLLDLCEKEGV 314
>Os05g0594100 Similar to GDA2 protein
Length = 277
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 7/139 (5%)
Query: 12 EDASMAGAIFMSNTATRELCFRSNIFGLPIEYQPFVRNIRQGMPLFLFDHTERKLYGVFE 71
++ ++ G IF+ N T E + +FGLP Y+ VR IR G+PLFL++++ +L+G+FE
Sbjct: 138 KEEAIGGYIFVCNNETMEENLKRQLFGLPSRYRDSVRAIRPGLPLFLYNYSTHQLHGIFE 197
Query: 72 ATSDGGFNIIRSAFSSIGC-----SYPAQVCFKIIWKCRPLTEDEFSPAIKENYYMPWKF 126
ATS GG NI A+ C +PAQV C PL ED F P + ++Y KF
Sbjct: 198 ATSFGGSNIDPGAWEDSKCPGGESRFPAQVRVATRKICEPLEEDAFRPVL--HHYDGPKF 255
Query: 127 YFDLSYQQVVCLYQLFDEK 145
+L+ + + L +F EK
Sbjct: 256 RLELTVAEALSLLDIFAEK 274
>Os11g0525700 Conserved hypothetical protein
Length = 644
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 108/249 (43%), Gaps = 35/249 (14%)
Query: 17 AGAIFMSNTATRELCFRSNIFGLPIEYQPFVRNIRQGMPLFLFDHTERKLYGVFEATSDG 76
AG IFM N T+ C+R + GLP+ V IR+G LFL+D + LYG + A S+G
Sbjct: 226 AGYIFMCNGVTKAECYRHRVMGLPLGSLDVVSRIRRGTALFLYDFDAKHLYGPYHADSNG 285
Query: 77 GFNIIRSAFSSIGCSYPAQVCFKIIWKCRPLTEDEFSPAIKENYYMPWKFYFDLSYQQVV 136
G ++ AF +PAQV F + P+ E AIKENY KF +L+ QV
Sbjct: 286 GLTLVPDAFRG---RFPAQVKFTVDGDFMPIPESSLRTAIKENYSN-GKFSPELTLVQVE 341
Query: 137 CLYQLFDEKRVEHPIHNHSKSANLENDPFRKGTQERKSLSPNIPHFPADQPGLFMPASTP 196
L LF PI +SA ND +R + P + PA P PA+
Sbjct: 342 KLRALF------RPIIVMPESALFHND------SDRHPVPPAVYLPPASHPS--QPAAY- 386
Query: 197 RFSTVEASYCASTSMH------------QAPHPNMSMPLGTNPFGVQIA--PVHNSHHDQ 242
+ SY + H Q P PNM T P+ + A P +H
Sbjct: 387 VHQQHQTSYIPPLTAHPMPPESYAHSYAQMPPPNMQ--FTTPPYHMSTAEYPYQAAHTAY 444
Query: 243 AELPYNNNM 251
+ LP NN+
Sbjct: 445 SSLPSANNI 453
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 81/171 (47%), Gaps = 11/171 (6%)
Query: 17 AGAIFMSNTATRELCFRSNIFGLPIEYQPFVRNIRQGMPLFLFDHTERKLYGVFEATSDG 76
AG IFM + AT+ C+ + G P P V IR+G LFL+D R L+G + A SDG
Sbjct: 46 AGYIFMCSGATKPECYARGVMGQPRGRLPAVSRIRRGAALFLYDFDSRHLHGPYRAASDG 105
Query: 77 GFNIIRSAFSSIGCSYPAQVCFKIIWKCRPLTEDEFSPAIKENYYMPWKFYFDLSYQQVV 136
G ++ +AF G +PAQV F I P+ E AIKENY KF +L+ QV
Sbjct: 106 GLDLAPAAF---GGRFPAQVKFTIDGDFMPIPESSLRSAIKENYSN-GKFSSELTLAQVE 161
Query: 137 CLYQLFDEKRVEHPIHNHSKSANLENDPFRKGTQERKSLSPNIPHFPADQP 187
L LF V+ L N+ + S+SP P D+P
Sbjct: 162 NLRTLFRPIIVQ-------PEPGLPNNFDDRQPARPCSMSPTAPSLVCDKP 205
>Os01g0550300 Similar to Gda-1 protein
Length = 328
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 76/137 (55%), Gaps = 6/137 (4%)
Query: 13 DASMAGAIFMSNTATRELCFRSNIFGLPIEYQPFVRNIRQGMPLFLFDHTERKLYGVFEA 72
D ++ G IF+ N T E + +FGLP Y+ VR IR G+PLFL++++ +L+G+FEA
Sbjct: 191 DEAIGGYIFVCNNDTMEENLKRQLFGLPSRYRDSVRAIRPGLPLFLYNYSTHQLHGIFEA 250
Query: 73 TSDGGFNIIRSAFSSIGC----SYPAQVCFKIIWKCRPLTEDEFSPAIKENYYMPWKFYF 128
S GG NI +A+ C +PAQV PL ED F P + ++Y KF
Sbjct: 251 ASFGGTNIDPTAWEDKKCPGESRFPAQVKVATRKIYDPLEEDAFRPIL--HHYDGPKFRL 308
Query: 129 DLSYQQVVCLYQLFDEK 145
+LS + + L +F +K
Sbjct: 309 ELSVAEALSLLDIFADK 325
>Os06g0174350 Conserved hypothetical protein
Length = 505
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 54/87 (62%)
Query: 10 FREDASMAGAIFMSNTATRELCFRSNIFGLPIEYQPFVRNIRQGMPLFLFDHTERKLYGV 69
F + GAI + N T+ F +FGLP F++ IR GM LF+F+ ERKLYGV
Sbjct: 123 FNKPGVYGGAIIICNHMTKRGFFEKKLFGLPGYAATFIKKIRVGMLLFVFELGERKLYGV 182
Query: 70 FEATSDGGFNIIRSAFSSIGCSYPAQV 96
FEATS+G +I+ +AF+S+ PAQV
Sbjct: 183 FEATSNGALDILPNAFTSLRKPRPAQV 209
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.131 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 25,347,985
Number of extensions: 1180474
Number of successful extensions: 2695
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 2685
Number of HSP's successfully gapped: 11
Length of query: 710
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 602
Effective length of database: 11,396,689
Effective search space: 6860806778
Effective search space used: 6860806778
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 160 (66.2 bits)