BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0476800 Os09g0476800|AK109663
(273 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0476800 Glutelin family protein 311 2e-85
Os08g0490600 Beta-Ig-H3/fasciclin domain containing protein 167 1e-41
Os08g0321000 Beta-Ig-H3/fasciclin domain containing protein 138 4e-33
Os09g0248100 Beta-Ig-H3/fasciclin domain containing protein 132 2e-31
Os06g0285100 110 1e-24
Os04g0574200 Beta-Ig-H3/fasciclin domain containing protein 104 5e-23
Os01g0841100 Beta-Ig-H3/fasciclin domain containing protein 75 7e-14
Os05g0459700 Beta-Ig-H3/fasciclin domain containing protein 73 2e-13
Os08g0502400 Beta-Ig-H3/fasciclin domain containing protein 66 3e-11
>Os09g0476800 Glutelin family protein
Length = 273
Score = 311 bits (798), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 159/214 (74%), Positives = 159/214 (74%)
Query: 46 NVTTAMAKGGCKAFADLIAASPDASSTYQSAAGGGITVFCPTDDAVRAFLPRYKNLTADG 105
NVTTAMAKGGCKAFADLIAASPDASSTYQSAAGGGITVFCPTDDAVRAFLPRYKNLTADG
Sbjct: 46 NVTTAMAKGGCKAFADLIAASPDASSTYQSAAGGGITVFCPTDDAVRAFLPRYKNLTADG 105
Query: 106 KAELLLFHAVPVYYSRGSLKSNNGVMNTLATDGAAKNYNFTVQNEGDAVTIKTAASGDAA 165
KAELLLFHAVPVYYSRGSLKSNNGVMNTLATDGAAKNYNFTVQNEGDAVTIKTAASGDAA
Sbjct: 106 KAELLLFHAVPVYYSRGSLKSNNGVMNTLATDGAAKNYNFTVQNEGDAVTIKTAASGDAA 165
Query: 166 RVKSTVVDADPVAIFTVDAVIEPVELFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 225
RVKSTVVDADPVAIFTVDAVIEPVELFK
Sbjct: 166 RVKSTVVDADPVAIFTVDAVIEPVELFKPAPSPTPAPSPAPAADAPKASKPAHHPAPVVA 225
Query: 226 XXXXXXXXDSPPXXXXXXXXXXXXXXXPPCVRWF 259
DSPP PPCVRWF
Sbjct: 226 DAPGPAATDSPPADQKKEAKKSAAAGAPPCVRWF 259
>Os08g0490600 Beta-Ig-H3/fasciclin domain containing protein
Length = 181
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/103 (77%), Positives = 89/103 (86%)
Query: 91 VRAFLPRYKNLTADGKAELLLFHAVPVYYSRGSLKSNNGVMNTLATDGAAKNYNFTVQNE 150
+RAF+P YKNLTADGKA LLLFHAVPVYYS SLKSNNGVMNTLATDG+AKN+NFTVQNE
Sbjct: 1 MRAFMPTYKNLTADGKASLLLFHAVPVYYSLRSLKSNNGVMNTLATDGSAKNFNFTVQNE 60
Query: 151 GDAVTIKTAASGDAARVKSTVVDADPVAIFTVDAVIEPVELFK 193
GD VTIKT AS AR+K TV D DP+AI+ VD V+EPVELF+
Sbjct: 61 GDKVTIKTDASDGVARIKDTVYDKDPIAIYAVDTVLEPVELFE 103
>Os08g0321000 Beta-Ig-H3/fasciclin domain containing protein
Length = 415
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 102/149 (68%), Gaps = 3/149 (2%)
Query: 46 NVTTAMAKGGCKAFADLIAASPDASSTYQSAAGGGITVFCPTDDAVRAFLPRYKNLTADG 105
N+T ++K CK FA L+A++ D S + G+T+FCP D AV AFLP+YKNLTA G
Sbjct: 190 NLTELLSKKYCKNFAGLLASNADVYSNINATKDNGLTLFCPVDAAVDAFLPKYKNLTAKG 249
Query: 106 KAELLLFHAVPVYYSRGSLKSNNGVMNTLATDGAA-KNYNFTVQNEGDAVTIKTAASGDA 164
KA +LL+HAVP YYS LKSN+G ++TLAT A K+Y++ V N+ D+V + T ++
Sbjct: 250 KAAILLYHAVPDYYSLQLLKSNSGKVSTLATASVAKKDYSYDVSNDRDSVLLDTKV--NS 307
Query: 165 ARVKSTVVDADPVAIFTVDAVIEPVELFK 193
A V +TV DADP+A++ + ++P ELFK
Sbjct: 308 ASVTATVKDADPLAVYAISKFLQPKELFK 336
>Os09g0248100 Beta-Ig-H3/fasciclin domain containing protein
Length = 401
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 98/149 (65%), Gaps = 3/149 (2%)
Query: 46 NVTTAMAKGGCKAFADLIAASPDASSTYQSAAGGGITVFCPTDDAVRAFLPRYKNLTADG 105
N+T ++K CK+FA L+AA+ D G+T+FCP D AV AF+P YKNLTA
Sbjct: 191 NLTELLSKKYCKSFAGLLAANADVFRAVNETKDNGLTLFCPVDAAVAAFMPSYKNLTAKA 250
Query: 106 KAELLLFHAVPVYYSRGSLKSNNGVMNTLAT-DGAAKNYNFTVQNEGDAVTIKTAASGDA 164
K +LL+HAVP Y+S LKSNNG++ TLAT + K+Y++ VQN+G+ VT+ T A
Sbjct: 251 KTAILLYHAVPDYFSLQLLKSNNGMVTTLATASESKKDYSYDVQNKGETVTLDTRVVNSA 310
Query: 165 ARVKSTVVDADPVAIFTVDAVIEPVELFK 193
V +TV DA+P+A++ V ++P EL+K
Sbjct: 311 --VTATVGDAEPLAVYAVTKFLKPKELYK 337
>Os06g0285100
Length = 244
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 82/115 (71%), Gaps = 5/115 (4%)
Query: 82 TVFCPTDDAVRAFLPRYKNLTADGKAELLLFHAVPVYYSRGSLKSNNGVMNTLATD--GA 139
TVFCP DDAV AF+P ++ LTAD K LLL+HAV ++S +LK+ NG +NTLATD G
Sbjct: 53 TVFCPADDAVAAFIPAFRGLTADAKVALLLYHAVAAHFSEEALKAINGEVNTLATDGGGG 112
Query: 140 AKNYNFTVQ--NEGDAVTIK-TAASGDAARVKSTVVDADPVAIFTVDAVIEPVEL 191
K N T++ ++G T+K +++SG+ ARV T+ DADP A++ +DAV+ P+++
Sbjct: 113 GKVLNLTIEEDDDGAGATVKLSSSSGNVARVTKTIQDADPHAVYLIDAVLMPLDV 167
>Os04g0574200 Beta-Ig-H3/fasciclin domain containing protein
Length = 431
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 87/148 (58%), Gaps = 5/148 (3%)
Query: 46 NVTTAMAKGGCKAFADLIAASPDASSTYQSAAGGGITVFCPTDDAVRAF-LPRYKNLTAD 104
N+T + K GCK FA LI +S YQ+A +T+F P DDA +A LP LT+
Sbjct: 185 NLTALLEKAGCKQFARLIVSS-GVMKMYQAAMDKALTLFAPNDDAFQAKGLPDLSKLTSA 243
Query: 105 GKAELLLFHAVPVYYSRGSLKSNNGVMNTLATDGAAKNYNFTVQNEGDAVTIKTAASGDA 164
LL +HA+P Y + SLK+ G + TLA+ GA K Y+ +V +GD V++ T D
Sbjct: 244 ELVTLLQYHALPQYAPKASLKTIKGHIQTLASTGAGK-YDLSVVTKGDDVSMDTGM--DK 300
Query: 165 ARVKSTVVDADPVAIFTVDAVIEPVELF 192
+RV STV+D P I TVD+V+ P ELF
Sbjct: 301 SRVASTVLDDTPTVIHTVDSVLLPPELF 328
>Os01g0841100 Beta-Ig-H3/fasciclin domain containing protein
Length = 427
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 78/153 (50%), Gaps = 9/153 (5%)
Query: 46 NVTTAMAKG-GCKAFADLIAASPDASSTYQSAAGGGITVFCPTDDAVRAFLP---RYKNL 101
N+T +A G A ++ AS A G GITVF PTDDA A LP R ++L
Sbjct: 202 NITHVLADARGFNVAASMLEASGVADEFTADERGAGITVFVPTDDAF-ADLPATDRLQSL 260
Query: 102 TADGKAELLLFHAVPVYYSRGSLKS-NNGVMNTLATDG-AAKNYNFTVQNEGDAVTIKTA 159
AD KA +L FH + YY GSL+S N V TLAT+ A + + +V I T
Sbjct: 261 PADRKATVLRFHVLHSYYPLGSLESIVNPVQPTLATERFEAGQFTLNITRVNGSVAIDTG 320
Query: 160 ASGDAARVKSTVVDADPVAIFTVDAVIEPVELF 192
A + TV D +PVA+F V V+ P E+F
Sbjct: 321 IV--QASITRTVFDQNPVAVFAVSKVLLPKEMF 351
>Os05g0459700 Beta-Ig-H3/fasciclin domain containing protein
Length = 472
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 46 NVTTAMAKGGCKAF---ADLIAASPDASSTYQSAAGGGITVFCPTDDAVRAFLP---RYK 99
N+T +A +AF A ++ AS A G GITVF PTDDA A LP R +
Sbjct: 208 NITKVLAD--ARAFNVAASMLEASGVADEFEADERGAGITVFAPTDDAF-AGLPAGDRLQ 264
Query: 100 NLTADGKAELLLFHAVPVYYSRGSLKS-NNGVMNTLATD-GAAKNYNFTVQNEGDAVTIK 157
+L A+ KA +L FH + YY GSL+S N V TLAT+ A + + +V I
Sbjct: 265 SLPAERKAVVLRFHVLHSYYPLGSLESIVNPVQPTLATEFTQAGRFTLNITRANGSVAID 324
Query: 158 TAASGDAARVKSTVVDADPVAIFTVDAVIEPVELFK 193
T A + TV D +PVA+F V V+ P E+F
Sbjct: 325 TGVV--QATITRTVFDQNPVAVFAVSKVLLPKEMFS 358
>Os08g0502400 Beta-Ig-H3/fasciclin domain containing protein
Length = 274
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
Query: 54 GGCKAFADLIAASPDASSTYQSAAGG---GITVFCPTDDAVRAFLPRYK--NLTADGKAE 108
G F DL+ + D T+QS A G GITVF P DA A L R NLT+D
Sbjct: 62 GPFHTFLDLLEKT-DVLRTFQSQANGSKDGITVFVP-KDAAFASLARSATANLTSDQLKS 119
Query: 109 LLLFHAVPVYYSRGSLKSNNGVMNTLATDGAAKNYNFTVQNEGDAVTIKTAASGDAARVK 168
L L+HA+P YYS G + + T + +TV D T+ + ++
Sbjct: 120 LALYHALPRYYSLAEFNRLGGAASPVPTLAGGE---YTVNVTDDMGTVHVGSMWSNPKIS 176
Query: 169 STVVDADPVAIFTVDAVIEPVELFK 193
S+V PVA++ VD V+ P+++F+
Sbjct: 177 SSVYSTRPVAVYEVDRVLLPMQIFR 201
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.131 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,486,657
Number of extensions: 186595
Number of successful extensions: 698
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 693
Number of HSP's successfully gapped: 9
Length of query: 273
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 174
Effective length of database: 11,866,615
Effective search space: 2064791010
Effective search space used: 2064791010
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 155 (64.3 bits)