Os09g0476800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutelin family protein.
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Os09g0476800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutelin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 114.92 | 0.504 | 3.63 | 0.0139 | 0.63 | 0.279 | 0.722 | -2.01 | -0.431 | 0.0789 | 19.4 | 90 | -- | -- |
| 126.41 | 0.524 | 3.66 | -0.13 | 0.621 | 0.679 | 0.297 | -- | -0.428 | 23.7 | 19.36 | 219 | -- | -- |
| 116.89 | 0.504 | 3.64 | -0.049 | 0.629 | 0.289 | -- | -1.76 | -0.444 | 0.0527 | 19.4 | 95 | -- | -- |
| 125.9 | 0.523 | 3.67 | -0.201 | 0.618 | 0.702 | -- | -- | -0.482 | 23.9 | 19 | 138 | -- | -- |
| 140.29 | 0.552 | 3.62 | 0.0062 | -- | 0.521 | -- | -1.64 | -0.41 | -- | 19.4 | 77 | -- | -- |
| 135.95 | 0.547 | 3.69 | -0.409 | 0.7 | -- | -0.00686 | -- | -0.567 | 0.155 | -- | -- | -- | -- |
| 135.95 | 0.546 | 3.69 | -0.408 | 0.7 | -- | -- | -- | -0.567 | 0.155 | -- | -- | -- | -- |
| 148.6 | 0.568 | 3.65 | -0.116 | -- | 0.876 | -- | -- | -0.444 | -- | 19.04 | 137 | -- | -- |
| 126.85 | 0.525 | 3.66 | -- | 0.609 | 0.773 | -- | -- | -0.454 | 23.8 | 18.95 | 144 | -- | -- |
| 166.83 | 0.604 | 3.68 | -0.386 | -- | -- | -- | -- | -0.557 | -- | -- | -- | -- | -- |
| 140.35 | 0.554 | 3.68 | -- | 0.695 | -- | -- | -- | -0.522 | 0.122 | -- | -- | -- | -- |
| 148.91 | 0.568 | 3.65 | -- | -- | 0.912 | -- | -- | -0.428 | -- | 19.04 | 137 | -- | -- |
| 170.76 | 0.61 | 3.67 | -- | -- | -- | -- | -- | -0.514 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 113.74 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 2 | 113.97 | temperature | 20 | 90 | > th | dose independent | rect. | 4 | 23 |
| 3 | 114.37 | humidity | 70 | 43200 | > th | dose dependent | rect. | 19 | 7 |
| 4 | 114.38 | humidity | 70 | 43200 | > th | dose dependent | rect. | 18 | 9 |
| 6 | 114.40 | humidity | 70 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 10 | 114.47 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 14 | 114.52 | humidity | 70 | 43200 | > th | dose dependent | sin | 12 | NA |
| 15 | 114.52 | humidity | 70 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 17 | 114.53 | humidity | 80 | 43200 | > th | dose independent | rect. | 23 | 17 |
| 20 | 114.56 | humidity | 50 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 37 | 114.66 | humidity | 80 | 43200 | > th | dose independent | rect. | 24 | 15 |
| 47 | 114.70 | humidity | 80 | 43200 | > th | dose independent | rect. | 22 | 19 |
| 82 | 114.87 | humidity | 80 | 43200 | < th | dose independent | rect. | 23 | 17 |
| 105 | 114.95 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 21 |
| 174 | 115.19 | humidity | 80 | 43200 | > th | dose independent | rect. | 11 | 20 |
| 175 | 115.19 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 21 |
| 183 | 115.21 | temperature | 20 | 90 | < th | dose independent | rect. | 5 | 22 |
| 184 | 115.21 | temperature | 20 | 90 | > th | dose independent | rect. | 15 | 23 |
| 195 | 115.25 | humidity | 80 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 278 | 115.55 | temperature | 20 | 90 | < th | dose independent | rect. | 3 | 23 |
| 323 | 115.67 | humidity | 60 | 43200 | > th | dose dependent | rect. | 21 | 18 |
| 329 | 115.71 | humidity | 80 | 43200 | < th | dose independent | rect. | 11 | 21 |
| 334 | 115.72 | humidity | 80 | 43200 | < th | dose independent | rect. | 12 | 19 |
| 370 | 115.80 | humidity | 80 | 43200 | > th | dose independent | sin | 4 | NA |
| 393 | 115.85 | humidity | 50 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 406 | 115.89 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 22 |
| 417 | 115.93 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 20 |
| 462 | 116.07 | temperature | 20 | 90 | < th | dose independent | rect. | 7 | 23 |
| 470 | 116.09 | humidity | 80 | 43200 | < th | dose independent | rect. | 13 | 15 |
| 491 | 116.13 | humidity | 80 | 43200 | > th | dose independent | no | NA | NA |
| 533 | 116.23 | temperature | 20 | 90 | < th | dose independent | no | NA | NA |
| 538 | 116.25 | temperature | 20 | 90 | > th | dose independent | no | NA | NA |
| 541 | 116.25 | temperature | 20 | 90 | < th | dose independent | rect. | 19 | 23 |
| 545 | 116.26 | temperature | 20 | 90 | > th | dose independent | rect. | 19 | 23 |
| 569 | 116.32 | humidity | 50 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 576 | 116.33 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 595 | 116.40 | temperature | 20 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 603 | 116.42 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 617 | 116.45 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 618 | 116.45 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 632 | 116.49 | temperature | 25 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 640 | 116.51 | humidity | 50 | 43200 | < th | dose dependent | rect. | 10 | 3 |
| 646 | 116.52 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 648 | 116.52 | humidity | 50 | 43200 | < th | dose dependent | rect. | 7 | 6 |
| 656 | 116.53 | humidity | 50 | 43200 | < th | dose dependent | rect. | 19 | 18 |
| 664 | 116.54 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 680 | 116.56 | humidity | 80 | 43200 | < th | dose independent | no | NA | NA |
| 700 | 116.58 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 724 | 116.64 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 742 | 116.67 | temperature | 20 | 10 | < th | dose independent | rect. | 1 | 23 |
| 754 | 116.69 | temperature | 20 | 90 | < th | dose independent | rect. | 7 | 20 |
| 766 | 116.70 | humidity | 80 | 43200 | > th | dose independent | rect. | 6 | 23 |
| 799 | 116.75 | humidity | 80 | 43200 | > th | dose independent | rect. | 3 | 23 |
| 807 | 116.77 | temperature | 20 | 90 | < th | dose independent | rect. | 23 | 23 |
| 827 | 116.79 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 829 | 116.80 | temperature | 20 | 10 | < th | dose independent | rect. | 9 | 21 |
| 851 | 116.82 | humidity | 80 | 43200 | < th | dose independent | rect. | 6 | 23 |
| 862 | 116.84 | temperature | 20 | 43200 | < th | dose dependent | rect. | 9 | 10 |
| 866 | 116.84 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 870 | 116.85 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 871 | 116.85 | temperature | 15 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 905 | 116.88 | humidity | 50 | 43200 | < th | dose independent | rect. | 19 | 17 |
| 912 | 116.89 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 919 | 116.90 | temperature | 20 | 90 | < th | dose independent | rect. | 9 | 18 |
| 920 | 116.90 | humidity | 50 | 43200 | > th | dose independent | rect. | 18 | 18 |
| 949 | 116.93 | humidity | 80 | 43200 | < th | dose independent | sin | 4 | NA |
| 953 | 116.93 | temperature | 20 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 986 | 116.99 | humidity | 50 | 43200 | < th | dose independent | rect. | 4 | 8 |