BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0476800 Os09g0476800|AK109663
(273 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G55730.1 | chr5:22558375-22560392 REVERSE LENGTH=425 157 4e-39
AT4G12730.1 | chr4:7491598-7492809 REVERSE LENGTH=404 132 2e-31
AT3G60900.1 | chr3:22499573-22500841 REVERSE LENGTH=423 110 7e-25
AT2G45470.1 | chr2:18742797-18744059 REVERSE LENGTH=421 110 1e-24
AT2G20520.1 | chr2:8840663-8841406 FORWARD LENGTH=248 67 8e-12
AT3G46550.1 | chr3:17136612-17137874 REVERSE LENGTH=421 66 2e-11
AT2G04780.1 | chr2:1677488-1678252 FORWARD LENGTH=255 66 2e-11
AT1G03870.1 | chr1:982625-983368 REVERSE LENGTH=248 62 3e-10
AT5G44130.1 | chr5:17761128-17761871 FORWARD LENGTH=248 60 2e-09
AT5G03170.1 | chr5:752898-753638 REVERSE LENGTH=247 57 1e-08
AT5G60490.1 | chr5:24325916-24326665 REVERSE LENGTH=250 56 2e-08
>AT5G55730.1 | chr5:22558375-22560392 REVERSE LENGTH=425
Length = 424
Score = 157 bits (398), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/148 (53%), Positives = 101/148 (68%), Gaps = 3/148 (2%)
Query: 46 NVTTAMAKGGCKAFADLIAASPDASSTYQSAAGGGITVFCPTDDAVRAFLPRYKNLTADG 105
N+T M+ GCK FA+ + +P AS TYQ + GG+TVFCP DDA++ FLP+YKNLTA
Sbjct: 186 NLTGIMSAHGCKVFAETLLTNPGASKTYQESLEGGMTVFCPGDDAMKGFLPKYKNLTAPK 245
Query: 106 KAELLLFHAVPVYYSRGSLKSNNGVMNTLATDGAAKNYNFTVQNEGDAVTIKTAASGDAA 165
K L F AVP YYS LKSNNG MNTLATDGA K + TVQN+G+ VT+KT +
Sbjct: 246 KEAFLDFLAVPTYYSMAMLKSNNGPMNTLATDGANK-FELTVQNDGEKVTLKTRI--NTV 302
Query: 166 RVKSTVVDADPVAIFTVDAVIEPVELFK 193
++ T++D P+AI+ D V+ P ELFK
Sbjct: 303 KIVDTLIDEQPLAIYATDKVLLPKELFK 330
>AT4G12730.1 | chr4:7491598-7492809 REVERSE LENGTH=404
Length = 403
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 100/147 (68%), Gaps = 4/147 (2%)
Query: 47 VTTAMAKGGCKAFADLIAASPDASSTYQSAAGGGITVFCPTDDAVRAFLPRYKNLTADGK 106
+TT + K GCKAF+D++ S A T+Q GG+TVFCP+D AV F+P++K+L+ K
Sbjct: 191 LTTILEKQGCKAFSDILK-STGADKTFQDTVDGGLTVFCPSDSAVGKFMPKFKSLSPANK 249
Query: 107 AELLLFHAVPVYYSRGSLKSNNGVMNTLATDGAAKNYNFTVQNEGDAVTIKTAASGDAAR 166
L+L+H +PVY S L+S NG +NTLAT+G K ++FTVQN+G+ VT++T A+
Sbjct: 250 TALVLYHGMPVYQSLQMLRSGNGAVNTLATEGNNK-FDFTVQNDGEDVTLETDVV--TAK 306
Query: 167 VKSTVVDADPVAIFTVDAVIEPVELFK 193
V T+ D +P+ ++ +D V+ P E++K
Sbjct: 307 VMGTLKDQEPLIVYKIDKVLLPREIYK 333
>AT3G60900.1 | chr3:22499573-22500841 REVERSE LENGTH=423
Length = 422
Score = 110 bits (275), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 88/148 (59%), Gaps = 5/148 (3%)
Query: 46 NVTTAMAKGGCKAFADLIAASPDASSTYQSAAGGGITVFCPTDDAVRAF-LPRYKNLTAD 104
N+T + K GCK FA+L+ +S T++S G+TVF P+D+A +A +P NLT
Sbjct: 190 NITGLLEKAGCKTFANLLVSS-GVIKTFESTVEKGLTVFAPSDEAFKARGVPDLTNLTQA 248
Query: 105 GKAELLLFHAVPVYYSRGSLKSNNGVMNTLATDGAAKNYNFTVQNEGDAVTIKTAASGDA 164
LL +HA+ Y +GSLK+N ++TLAT+GA K Y+ T GD V + T
Sbjct: 249 EVVSLLEYHALAEYKPKGSLKTNKDAISTLATNGAGK-YDLTTSTSGDEVILHTGVG--P 305
Query: 165 ARVKSTVVDADPVAIFTVDAVIEPVELF 192
+R+ TVVD PV IFTVD V+ P ELF
Sbjct: 306 SRLADTVVDETPVVIFTVDNVLLPAELF 333
>AT2G45470.1 | chr2:18742797-18744059 REVERSE LENGTH=421
Length = 420
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 90/148 (60%), Gaps = 5/148 (3%)
Query: 46 NVTTAMAKGGCKAFADLIAASPDASSTYQSAAGGGITVFCPTDDAVRAF-LPRYKNLTAD 104
N+T + K GCK FA+L+ +S TY+SA G+TVF P+D+A +A +P LT
Sbjct: 189 NITGLLEKAGCKTFANLLVSS-GVLKTYESAVEKGLTVFAPSDEAFKAEGVPDLTKLTQA 247
Query: 105 GKAELLLFHAVPVYYSRGSLKSNNGVMNTLATDGAAKNYNFTVQNEGDAVTIKTAASGDA 164
LL +HA+ Y +GSLK+N ++TLAT+GA K ++ T GD V + T +
Sbjct: 248 EVVSLLEYHALAEYKPKGSLKTNKNNISTLATNGAGK-FDLTTSTSGDEVILHTGVA--P 304
Query: 165 ARVKSTVVDADPVAIFTVDAVIEPVELF 192
+R+ TV+DA PV IFTVD V+ P ELF
Sbjct: 305 SRLADTVLDATPVVIFTVDNVLLPAELF 332
>AT2G20520.1 | chr2:8840663-8841406 FORWARD LENGTH=248
Length = 247
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 80 GITVFCPTDDAVRAFLPRYKN-LTADGKAELLLFHAVPVYYSRGSLKSNNGVMNTLAT-- 136
G+T+F PTD+A P N LT + +L+L+H +P YYS L + + T AT
Sbjct: 75 GMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDLLLASNPVRTQATGQ 134
Query: 137 DGAAKNYNFTVQNEGDAVTIKTAASGDAARVKSTVVDADPVAIFTVDAVIEPVELF 192
DG NFT Q + + V + T R+ + + P+A++ VD+V+ P ELF
Sbjct: 135 DGGVFGLNFTGQAQSNQVNVSTGVV--ETRINNALRQQFPLAVYVVDSVLLPEELF 188
>AT3G46550.1 | chr3:17136612-17137874 REVERSE LENGTH=421
Length = 420
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 78 GGGITVFCPTDDAVRAFLPRYKNLT---ADGKAELLLFHAVPVYYSRGSLKS-NNGVMNT 133
G GITVF PTD A LP NL A+ KA +L FH + YY+ GSL+S N V T
Sbjct: 240 GAGITVFVPTDSAFSD-LPSNVNLQSLPAEQKAFVLKFHVLHSYYTLGSLESITNPVQPT 298
Query: 134 LATDG-AAKNYNFTVQN-EGDAVTIKTAASGDAARVKSTVVDADPVAIFTVDAVIEPVEL 191
LAT+ A +Y + G VTI + A V T D +PV++F V V+ P EL
Sbjct: 299 LATEEMGAGSYTLNISRVNGSIVTINSGVV--LAVVTQTAFDQNPVSVFGVSKVLLPKEL 356
Query: 192 F 192
F
Sbjct: 357 F 357
>AT2G04780.1 | chr2:1677488-1678252 FORWARD LENGTH=255
Length = 254
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 14/154 (9%)
Query: 46 NVTTAMAKGG-CKAFADLIAASPDASSTYQSAAGG---GITVFCPTDDAVRAFL-PRYKN 100
N+T ++ G F D + S T+Q+ A GIT+F P DDA +A P N
Sbjct: 46 NLTELLSVAGPFHTFLDYLL-STGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSN 104
Query: 101 LTADGKAELLLFHAVPVYYSRGSLK--SNNGVMNTLATDGAAKNYNFTVQNEGDAVTIKT 158
LT D +L+LFHA+P YYS K S +G ++T A G + FT + T++
Sbjct: 105 LTKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVSTFA--GGQYSLKFT----DVSGTVRI 158
Query: 159 AASGDAARVKSTVVDADPVAIFTVDAVIEPVELF 192
+ +V S+V DPVA++ V+ V+ P +F
Sbjct: 159 DSLWTRTKVSSSVFSTDPVAVYQVNRVLLPEAIF 192
>AT1G03870.1 | chr1:982625-983368 REVERSE LENGTH=248
Length = 247
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 46 NVTTAMAKGG-CKAFADLIAASPDASST--YQSAAGGGITVFCPTDDAVRAFLPRYKN-L 101
N+T + KGG F L+ + S +++ G+TVF PTD+A + P N L
Sbjct: 39 NLTAILEKGGQFTTFIHLLNITQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQL 98
Query: 102 TADGKAELLLFHAVPVYYSRGSLKSNNGVMNTLAT--DGAAKNYNFTVQNEGDAVTIKTA 159
+ D + +L+L+H P YYS L S + + T A+ D NFT G I +
Sbjct: 99 SPDDQVKLILYHVSPKYYSMDDLLSVSNPVRTQASGRDNGVYGLNFT----GQTNQINVS 154
Query: 160 ASGDAARVKSTVVDADPVAIFTVDAVIEPVELF 192
R+ +++ P+A++ VD V+ P E+F
Sbjct: 155 TGYVETRISNSLRQQRPLAVYVVDMVLLPGEMF 187
>AT5G44130.1 | chr5:17761128-17761871 FORWARD LENGTH=248
Length = 247
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 15/156 (9%)
Query: 46 NVTTAMAKGGCKAFADLIAASPDASSTYQ-----SAAGGGITVFCPTDDAVRAFLPRYKN 100
N+T + KGG F LI Q +++ G+TV PTD+A + P N
Sbjct: 36 NITAILEKGG--QFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDNAFQNLKPGTLN 93
Query: 101 -LTADGKAELLLFHAVPVYYSRGSLKSNNGVMNTLATD---GAAKNYNFTVQNEGDAVTI 156
L+ D + +L+L+H P +Y+ L S + + T A+ G NFT Q G+ V +
Sbjct: 94 KLSPDDQVKLILYHVSPKFYTLEDLLSVSNPVRTQASGRDVGGVYGLNFTGQ--GNQVNV 151
Query: 157 KTAASGDAARVKSTVVDADPVAIFTVDAVIEPVELF 192
T R+ +++ P+A++ VD V+ P E+F
Sbjct: 152 STGVV--ETRLSTSLRQERPLAVYVVDMVLLPEEMF 185
>AT5G03170.1 | chr5:752898-753638 REVERSE LENGTH=247
Length = 246
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Query: 46 NVTTAMAKGG-CKAFADLI---AASPDASSTYQSAAGGGITVFCPTDDAVRAFLPRYKN- 100
N+T + K G F L+ AS ++ S++ G+TVF PTD+A + N
Sbjct: 36 NITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTVFAPTDNAFNSLKSGTLNS 95
Query: 101 LTADGKAELLLFHAVPVYYSRGSLKSNNGVMNTLATDGAAKNYNFTVQNEGDAVTIKTAA 160
L+ K +L+ FH +P + ++ + + T A DG + + + G+ V I T
Sbjct: 96 LSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQAGDGQNGKFPLNITSSGNQVNITTGV 155
Query: 161 SGDAARVKSTVVDADPVAIFTVDAVIEPVELF 192
+A V ++V +A++ VD V+ P+ +F
Sbjct: 156 V--SATVANSVYSDKQLAVYQVDQVLLPLAMF 185
>AT5G60490.1 | chr5:24325916-24326665 REVERSE LENGTH=250
Length = 249
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Query: 46 NVTTAMAKGG-CKAFADLIAASPDASSTY--QSAAGGGITVFCPTDDAVRAFLPRYKN-L 101
NVT + K G F L+ ++ A+ Y + + GIT+F P+D + N L
Sbjct: 39 NVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSL 98
Query: 102 TADGKAELLLFHAVPVYYSRGSLKSNNGVMNTLATDGAAKNYNFTVQNEGDAVTIKTAAS 161
T + + EL+ FH +P Y S + ++ + + T A D A ++ V G+ V I + +
Sbjct: 99 TDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVTTSGNTVNITSGVT 158
Query: 162 GDAARVKSTVVDADPVAIFTVDAVIEPVELF 192
V V +A++ VD V+ P ++F
Sbjct: 159 N--TTVSGNVYSDGQLAVYQVDKVLLPQQVF 187
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.131 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,190,344
Number of extensions: 104579
Number of successful extensions: 284
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 264
Number of HSP's successfully gapped: 11
Length of query: 273
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 176
Effective length of database: 8,447,217
Effective search space: 1486710192
Effective search space used: 1486710192
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 111 (47.4 bits)