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Os08g0321000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Beta-Ig-H3/fasciclin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0821) R2 : 0.637
β1 : -6.9 (0.538) R2dD : 0.987 R2D : 0.0172
β2 : 0.0165 (0.139) R2dC : 1.16e-05 R2C : -0.0412
β3 : 4.1 (0.271) R2dE : 0.557 R2E : 0.0237
β4 : -3.83 (0.582) R2dD*C : 0.0354 R2D*C : 0.0119
β5 : -9.6 (2.08) R2dD*E : 0.14 R2D*E : -0.596
γ1 : -0.791 (0.16) R2dN8 : 0.0493 R2N8 : -0.0728
σ : 1.03
deviance : 479.3
__
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C
peak time of C : 15.3
E
wheather : temperature
threshold : 26.17
memory length : 1224
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
479.3 1.03 10.2 -6.9 0.0165 4.1 -3.83 -9.6 -0.791 15.3 26.17 1224 -- --
502.37 1.04 9.9 -4.63 0.0878 3.24 -3.2 -- -0.346 16 25.92 1188 -- --
515.76 1.06 10.1 -6.58 0.494 3.85 -- -8.18 -0.61 21.9 26.7 1304 -- --
531.95 1.07 9.89 -4.47 0.416 3.01 -- -- -0.213 21.1 26.7 1263 -- --
524.01 1.07 10.1 -6.57 -- 3.99 -- -8.11 -0.614 -- 26.6 1237 -- --
874.46 1.39 9.85 -3.62 0.694 -- 3.57 -- -0.143 1.72 -- -- -- --
915.13 1.42 9.87 -3.72 0.789 -- -- -- -0.156 23.5 -- -- -- --
539.29 1.08 9.88 -4.69 -- 3.17 -- -- -0.265 -- 26.41 1216 -- --
1059.05 1.52 9.7 -- 0.431 2.22 -- -- 0.513 21.6 28.4 1243 -- --
954.24 1.44 9.85 -3.7 -- -- -- -- -0.147 -- -- -- -- --
1280.55 1.67 9.78 -- 0.75 -- -- -- 0.259 23.2 -- -- -- --
1071.53 1.52 9.7 -- -- 2.25 -- -- 0.531 -- 28.4 1194 -- --
1315.75 1.69 9.76 -- -- -- -- -- 0.263 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 496.99 temperature 25 1440 > th dose dependent rect. 13 21
2 497.83 temperature 25 1440 > th dose dependent rect. 7 16
5 498.04 temperature 25 1440 > th dose dependent sin 20 NA
34 499.00 temperature 25 1440 > th dose dependent rect. 11 12
47 499.28 temperature 25 1440 > th dose dependent rect. 16 1
81 500.02 temperature 25 1440 > th dose dependent rect. 13 10
103 500.42 temperature 25 1440 > th dose dependent rect. 21 22
113 500.55 temperature 25 1440 > th dose dependent rect. 15 4
116 500.61 temperature 25 1440 > th dose dependent no NA NA
143 501.21 temperature 25 1440 > th dose dependent rect. 13 6
272 507.36 wind 5 43200 > th dose dependent rect. 10 22
283 508.15 wind 5 43200 > th dose dependent rect. 2 20
284 508.15 wind 5 43200 > th dose dependent rect. 24 22
285 508.17 wind 7 43200 > th dose independent rect. 18 22
291 508.28 wind 7 43200 < th dose independent rect. 18 22
304 509.00 wind 5 43200 > th dose dependent rect. 19 23
307 509.07 wind 5 43200 > th dose dependent rect. 17 23
321 509.45 wind 5 43200 > th dose independent rect. 2 15
328 509.84 wind 5 43200 < th dose independent rect. 24 17
350 510.31 wind 5 43200 > th dose dependent no NA NA
371 511.00 wind 5 43200 > th dose dependent rect. 3 13
387 511.28 wind 7 43200 < th dose independent rect. 24 22
397 511.59 wind 7 43200 > th dose independent rect. 24 22
399 511.59 wind 5 43200 > th dose dependent rect. 24 17
402 511.63 wind 5 43200 > th dose dependent rect. 2 15
421 511.93 wind 5 43200 < th dose independent rect. 3 13
435 512.11 wind 7 43200 < th dose independent rect. 10 23
440 512.28 wind 7 43200 < th dose independent no NA NA
446 512.34 wind 7 43200 > th dose independent rect. 10 23
448 512.35 wind 7 43200 > th dose independent rect. 2 23
449 512.35 wind 5 43200 > th dose dependent sin 1 NA
454 512.40 wind 7 43200 < th dose independent rect. 8 23
455 512.41 wind 7 43200 < th dose independent rect. 6 23
457 512.44 wind 7 43200 > th dose independent rect. 6 23
459 512.50 wind 7 43200 > th dose independent no NA NA
462 512.51 wind 5 43200 > th dose dependent rect. 13 23
475 512.70 wind 7 43200 > th dose independent rect. 8 23
488 512.93 wind 5 43200 > th dose dependent rect. 7 16
521 513.38 wind 7 43200 < th dose independent rect. 15 23
528 513.49 wind 7 43200 > th dose independent rect. 15 23
545 513.69 wind 7 43200 > th dose independent rect. 12 23
551 513.77 wind 5 43200 > th dose independent sin 1 NA
560 513.85 wind 7 43200 < th dose independent rect. 12 23
589 514.18 wind 5 43200 < th dose independent sin 2 NA
752 516.68 temperature 30 1440 < th dose independent rect. 18 22
774 517.12 temperature 30 1440 < th dose independent rect. 9 10
779 517.21 temperature 30 1440 < th dose independent rect. 9 23
781 517.23 temperature 30 1440 < th dose independent rect. 9 13
784 517.26 temperature 30 1440 < th dose independent rect. 9 15
786 517.28 temperature 30 1440 < th dose independent rect. 9 19
821 517.77 temperature 30 1440 < th dose independent rect. 13 23
886 518.59 temperature 30 1440 < th dose independent sin 20 NA
908 518.78 temperature 30 1440 < th dose independent rect. 6 13
912 518.82 temperature 30 1440 < th dose independent rect. 2 17
927 518.89 temperature 30 1440 < th dose independent rect. 6 16
929 518.89 temperature 30 1440 < th dose independent rect. 23 20
936 518.92 temperature 30 1440 < th dose independent rect. 6 18
945 518.93 temperature 30 1440 < th dose independent rect. 6 22
946 518.93 temperature 30 1440 < th dose independent rect. 21 22
985 519.04 temperature 30 1440 < th dose independent no NA NA