BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0321000 Os08g0321000|AK068096
(415 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G55730.1 | chr5:22558375-22560392 REVERSE LENGTH=425 285 3e-77
AT4G12730.1 | chr4:7491598-7492809 REVERSE LENGTH=404 275 2e-74
AT2G45470.1 | chr2:18742797-18744059 REVERSE LENGTH=421 218 5e-57
AT3G60900.1 | chr3:22499573-22500841 REVERSE LENGTH=423 209 3e-54
AT3G12660.1 | chr3:4019060-4019827 FORWARD LENGTH=256 119 4e-27
AT3G46550.1 | chr3:17136612-17137874 REVERSE LENGTH=421 99 4e-21
AT2G24450.1 | chr2:10393019-10393861 REVERSE LENGTH=281 87 1e-17
AT4G31370.1 | chr4:15223838-15224674 REVERSE LENGTH=279 76 3e-14
AT2G04780.1 | chr2:1677488-1678252 FORWARD LENGTH=255 67 1e-11
AT2G20520.1 | chr2:8840663-8841406 FORWARD LENGTH=248 61 1e-09
AT5G44130.1 | chr5:17761128-17761871 FORWARD LENGTH=248 58 1e-08
AT1G03870.1 | chr1:982625-983368 REVERSE LENGTH=248 54 1e-07
AT5G60490.1 | chr5:24325916-24326665 REVERSE LENGTH=250 52 6e-07
>AT5G55730.1 | chr5:22558375-22560392 REVERSE LENGTH=425
Length = 424
Score = 285 bits (729), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 144/313 (46%), Positives = 203/313 (64%), Gaps = 5/313 (1%)
Query: 26 YNITKILGDHPEYSQFNKLLTETRLAGDINRRRTITVLVVANGDMGALSGGHYTLPTLRH 85
+N+T++L +HP +S F+ LT+T LA +INRRRTITV V N M AL+ YTL TL++
Sbjct: 25 HNVTRLLANHPSFSSFSHFLTQTHLADEINRRRTITVCAVDNAAMSALTSKGYTLSTLKN 84
Query: 86 ILEMHILVDYYGAKKLHQLARGDTASSSMFQESGSAPGTTGYVNITQHRGGRVSFTAEDA 145
IL +H+L+DY+G KKLHQ+ G ++++FQ +G+APGT+G+VNIT RGG+V F D
Sbjct: 85 ILSLHVLLDYFGTKKLHQIRDGSALAATLFQATGAAPGTSGFVNITDLRGGKVGF-GPDG 143
Query: 146 ADSATPSSFVKSVKEIPYDLAVLQISKPLSSXXXXXXXXXXXXXNLTELLSKKYCKNFAG 205
D + S FVKS++E+PY+++++QIS+ L S NLT ++S CK FA
Sbjct: 144 GDLS--SFFVKSIEEVPYNISIIQISRVLPSETAAAPTPAPAEMNLTGIMSAHGCKVFAE 201
Query: 206 LLASNADVYSNINATKDNGLTLFCPVDAAVDAFLPKYKNLTAKGKAAILLYHAVPDYYSL 265
L +N + + G+T+FCP D A+ FLPKYKNLTA K A L + AVP YYS+
Sbjct: 202 TLLTNPGASKTYQESLEGGMTVFCPGDDAMKGFLPKYKNLTAPKKEAFLDFLAVPTYYSM 261
Query: 266 QLLKSNSGKVSTLATASVAKKDYSYDVSNDRDSVLLDTKVNSASVTATVKDADPLAVYAI 325
+LKSN+G ++TLAT K + V ND + V L T++N+ + T+ D PLA+YA
Sbjct: 262 AMLKSNNGPMNTLATDGANK--FELTVQNDGEKVTLKTRINTVKIVDTLIDEQPLAIYAT 319
Query: 326 SKFLQPKELFKVT 338
K L PKELFK +
Sbjct: 320 DKVLLPKELFKAS 332
>AT4G12730.1 | chr4:7491598-7492809 REVERSE LENGTH=404
Length = 403
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 206/312 (66%), Gaps = 6/312 (1%)
Query: 26 YNITKILGDHPEYSQFNKLLTETRLAGDINRRRTITVLVVANGDMGALSGGHYTLPTLRH 85
+NIT+IL P++S FN L+ T LA +INRR+TITVL V N M ++ Y+L +R+
Sbjct: 27 HNITRILAKDPDFSTFNHYLSATHLADEINRRQTITVLAVDNSAMSSILSNGYSLYQIRN 86
Query: 86 ILEMHILVDYYGAKKLHQLARGDTASSSMFQESGSAPGTTGYVNITQHRGGRVSFTAEDA 145
IL +H+LVDY+G KKLHQ+ G T+++SMFQ +GSA GT+GY+NIT +GG+V+F +D
Sbjct: 87 ILSLHVLVDYFGTKKLHQITDGSTSTASMFQSTGSATGTSGYINITDIKGGKVAFGVQD- 145
Query: 146 ADSATPSSFVKSVKEIPYDLAVLQISKPLSSXXXXXXXXXXXXXNLTELLSKKYCKNFAG 205
DS + +VKSV E PY+++VL IS+ L+S LT +L K+ CK F+
Sbjct: 146 DDSKLTAHYVKSVFEKPYNISVLHISQVLTSPEAEAPTASPSDLILTTILEKQGCKAFSD 205
Query: 206 LLAS-NADVYSNINATKDNGLTLFCPVDAAVDAFLPKYKNLTAKGKAAILLYHAVPDYYS 264
+L S AD T D GLT+FCP D+AV F+PK+K+L+ K A++LYH +P Y S
Sbjct: 206 ILKSTGAD--KTFQDTVDGGLTVFCPSDSAVGKFMPKFKSLSPANKTALVLYHGMPVYQS 263
Query: 265 LQLLKSNSGKVSTLATASVAKKDYSYDVSNDRDSVLLDTKVNSASVTATVKDADPLAVYA 324
LQ+L+S +G V+TLAT K D++ V ND + V L+T V +A V T+KD +PL VY
Sbjct: 264 LQMLRSGNGAVNTLATEGNNKFDFT--VQNDGEDVTLETDVVTAKVMGTLKDQEPLIVYK 321
Query: 325 ISKFLQPKELFK 336
I K L P+E++K
Sbjct: 322 IDKVLLPREIYK 333
>AT2G45470.1 | chr2:18742797-18744059 REVERSE LENGTH=421
Length = 420
Score = 218 bits (555), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 126/312 (40%), Positives = 184/312 (58%), Gaps = 7/312 (2%)
Query: 26 YNITKILGDHPEYSQFNKLLTETRLAGDINRRRTITVLVVANGDMGALSGGHYTLPTLRH 85
+NIT+IL D P+YS FN L++T+LA +IN R TITVLV+ NG M AL+G H L ++
Sbjct: 26 HNITQILADSPDYSSFNSYLSQTKLADEINSRTTITVLVLNNGAMSALAGKH-PLSVIKS 84
Query: 86 ILEMHILVDYYGAKKLHQLARGDTASSSMFQESGSAPGTTGYVNITQHRGGRVSFTAEDA 145
L + +L+DYY +KLH++++G T S++++Q +G+APG G+VNIT +GG+V F A
Sbjct: 85 ALSLLVLLDYYDPQKLHKISKGTTLSTTLYQTTGNAPGNLGFVNITDLKGGKVGF-GSAA 143
Query: 146 ADSATPSSFVKSVKEIPYDLAVLQISKP-LSSXXXXXXXXXXXXXNLTELLSKKYCKNFA 204
+ S SS+ KSVK+IPY++++L+I P ++ N+T LL K CK FA
Sbjct: 144 SGSKLDSSYTKSVKQIPYNISILEIDAPIIAPGVLTAPAPSASLSNITGLLEKAGCKTFA 203
Query: 205 GLLASNADVYSNINATKDNGLTLFCPVDAAVDA-FLPKYKNLTAKGKAAILLYHAVPDYY 263
LL S+ V + + GLT+F P D A A +P LT ++L YHA+ +Y
Sbjct: 204 NLLVSSG-VLKTYESAVEKGLTVFAPSDEAFKAEGVPDLTKLTQAEVVSLLEYHALAEYK 262
Query: 264 SLQLLKSNSGKVSTLATASVAKKDYSYDVSNDRDSVLLDTKVNSASVTATVKDADPLAVY 323
LK+N +STLAT K D + S D V+L T V + + TV DA P+ ++
Sbjct: 263 PKGSLKTNKNNISTLATNGAGKFDLTTSTSGDE--VILHTGVAPSRLADTVLDATPVVIF 320
Query: 324 AISKFLQPKELF 335
+ L P ELF
Sbjct: 321 TVDNVLLPAELF 332
>AT3G60900.1 | chr3:22499573-22500841 REVERSE LENGTH=423
Length = 422
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/314 (40%), Positives = 183/314 (58%), Gaps = 8/314 (2%)
Query: 25 GYNITKILGDHPEYSQFNKLLTETRLAGDINRRRTITVLVVANGDMGALSGGHYTLPTLR 84
G+NIT+IL D PEYS FN L++T+LA +IN R TITVLV+ NG M +L+G H L ++
Sbjct: 25 GHNITQILSDTPEYSSFNNYLSQTKLADEINSRTTITVLVLNNGAMSSLAGKH-PLSVVK 83
Query: 85 HILEMHILVDYYGAKKLHQLARGDTASSSMFQESGSAPGTTGYVNITQHRGGRVSFTAED 144
+ L + +L+DYY KLHQL++G T +++++Q +G A G G+VN+T +GG+V F
Sbjct: 84 NALSLLVLLDYYDPLKLHQLSKGTTLTTTLYQTTGHALGNLGFVNVTDLKGGKVGF-GSA 142
Query: 145 AADSATPSSFVKSVKEIPYDLAVLQISKPL--SSXXXXXXXXXXXXXNLTELLSKKYCKN 202
A S SS+ KSVK+IPY+++VL+I+ P+ N+T LL K CK
Sbjct: 143 APGSKLDSSYTKSVKQIPYNISVLEINAPIIAPGILTAPAPSSAGVSNITGLLEKAGCKT 202
Query: 203 FAGLLASNADVYSNINATKDNGLTLFCPVDAAVDAF-LPKYKNLTAKGKAAILLYHAVPD 261
FA LL S+ V +T + GLT+F P D A A +P NLT ++L YHA+ +
Sbjct: 203 FANLLVSSG-VIKTFESTVEKGLTVFAPSDEAFKARGVPDLTNLTQAEVVSLLEYHALAE 261
Query: 262 YYSLQLLKSNSGKVSTLATASVAKKDYSYDVSNDRDSVLLDTKVNSASVTATVKDADPLA 321
Y LK+N +STLAT K D + S D V+L T V + + TV D P+
Sbjct: 262 YKPKGSLKTNKDAISTLATNGAGKYDLTTSTSGDE--VILHTGVGPSRLADTVVDETPVV 319
Query: 322 VYAISKFLQPKELF 335
++ + L P ELF
Sbjct: 320 IFTVDNVLLPAELF 333
>AT3G12660.1 | chr3:4019060-4019827 FORWARD LENGTH=256
Length = 255
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 98/154 (63%), Gaps = 13/154 (8%)
Query: 26 YNITKILGDHPEYSQFNKLLTETRLAGDINRRRTITVLVVANGDMGALSGGHYTLPTLRH 85
+NIT IL +H ++S FN+LL+ET+LA IN+R+TITVLVV+NG + +LSG ++ ++
Sbjct: 24 FNITNILNEHDDFSNFNQLLSETQLASTINKRQTITVLVVSNGALSSLSGQPTSV--IKK 81
Query: 86 ILEMHILVDYYGAKKLHQLARGDTASSSMFQESGSAPGTTGYVNITQHRGGRVSFTAEDA 145
IL +HI++DYY KKL L++ +++FQ SG A G G++N T + G V+F
Sbjct: 82 ILSLHIVLDYYDQKKLKNLSKKTVLLTTLFQSSGLARGQQGFLNATVMKNGDVAF----- 136
Query: 146 ADSATPSS-----FVKSVKEIPYDLAVLQISKPL 174
SA P S +V +P++++VL IS +
Sbjct: 137 -GSAVPGSSLDAQLQDTVAALPFNISVLHISSAI 169
>AT3G46550.1 | chr3:17136612-17137874 REVERSE LENGTH=421
Length = 420
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 157/333 (47%), Gaps = 27/333 (8%)
Query: 27 NITKILGDHPEYSQFNKLLTETRLAGDINRRRTITVLVVANGDMGALSGG-HYTLP--TL 83
N+T +L P S F+ LL + +A +++ R ++T+L V N + S LP L
Sbjct: 30 NVTAVLSSFPNLSSFSNLLVSSGIAAELSGRNSLTLLAVPNSQFSSASLDLTRRLPPSAL 89
Query: 84 RHILEMHILVDYYGAKKLHQLARGDTASSSMFQESGSAPGTTGYVNITQHRGGRVSFTAE 143
+L H+L+ + L ++ +A +++++ SG +G VN+T+
Sbjct: 90 ADLLRFHVLLQFLSDSDLRRIPPSGSAVTTLYEASGRTFFGSGSVNVTRDPASGSVTIGS 149
Query: 144 DAADSATPSSFVKSVKEIPYDLAVLQI-------------SKPLSSXXXXXXXXXXXX-X 189
A + T +K ++ P ++ VL + S+ L+
Sbjct: 150 PATKNVT---VLKLLETKPPNITVLTVDSLIVPTGIDITASETLTPPPTSTSLSPPPAGI 206
Query: 190 NLTELLSKKYCKNFA-GLLASNADVYSNINATKDNGLTLFCPVDAAVDAFLPKYKNL--- 245
NLT++L + N A LL ++ + N + G+T+F P D+A LP NL
Sbjct: 207 NLTQILINGHNFNVALSLLVASGVITEFENDERGAGITVFVPTDSAFSD-LPSNVNLQSL 265
Query: 246 TAKGKAAILLYHAVPDYYSLQLLKSNSGKVS-TLATASVAKKDYSYDVSNDRDSVL-LDT 303
A+ KA +L +H + YY+L L+S + V TLAT + Y+ ++S S++ +++
Sbjct: 266 PAEQKAFVLKFHVLHSYYTLGSLESITNPVQPTLATEEMGAGSYTLNISRVNGSIVTINS 325
Query: 304 KVNSASVTATVKDADPLAVYAISKFLQPKELFK 336
V A VT T D +P++V+ +SK L PKELF
Sbjct: 326 GVVLAVVTQTAFDQNPVSVFGVSKVLLPKELFP 358
>AT2G24450.1 | chr2:10393019-10393861 REVERSE LENGTH=281
Length = 280
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 87/148 (58%), Gaps = 4/148 (2%)
Query: 27 NITKILGDHPEYSQFNKLLTETRLAGDINRRRTITVLVVANGDMGALSGGHYTLPTLRHI 86
NIT++L +PE+S +LL +T L IN+R+TITVL + N +G++SG +++I
Sbjct: 26 NITRVLEKYPEFSTMTELLAKTELTPIINKRQTITVLALNNDAIGSISGRPEE--EVKNI 83
Query: 87 LEMHILVDYYGAKKLHQLARGDTASSSMFQESGSAPGTTGYVNITQHRGGRVSFTAEDAA 146
L H+++DY+ KL L T ++++Q +G G++N T+ G++ F +
Sbjct: 84 LMNHVVLDYFDELKLKALKEKSTLLTTLYQSTGLGQQQNGFLNCTKSN-GKIYFGSGVKG 142
Query: 147 DSATPSSFVKSVKEIPYDLAVLQISKPL 174
T + ++ +V PY+L+V+QIS P+
Sbjct: 143 APQT-AEYITTVFRNPYNLSVVQISMPI 169
>AT4G31370.1 | chr4:15223838-15224674 REVERSE LENGTH=279
Length = 278
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 83/148 (56%), Gaps = 4/148 (2%)
Query: 27 NITKILGDHPEYSQFNKLLTETRLAGDINRRRTITVLVVANGDMGALSGGHYTLPTLRHI 86
NIT + ++S L +T+L I++ +TITVL V+N + +++ LR+I
Sbjct: 26 NITLAFQKYSKFSTMRDLFIKTKLIAAIDKYQTITVLAVSNDAISSITNRSEV--ELRNI 83
Query: 87 LEMHILVDYYGAKKLHQLARGDTASSSMFQESGSAPGTTGYVNITQHRGGRVSFTAEDAA 146
L H+++DYY KL + ++++Q +G G++N+++ + GRV F +E
Sbjct: 84 LMTHVILDYYDELKLQGMREKSIMLTTLYQTTGLGEQMNGFLNVSKSK-GRVYFGSE-VK 141
Query: 147 DSATPSSFVKSVKEIPYDLAVLQISKPL 174
+S + +V +V PY+L+++QI+ P+
Sbjct: 142 NSPLNAEYVSTVYHNPYNLSIIQITMPI 169
>AT2G04780.1 | chr2:1677488-1678252 FORWARD LENGTH=255
Length = 254
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 76/155 (49%), Gaps = 17/155 (10%)
Query: 190 NLTELLS-KKYCKNFAGLLASNA--DVYSNINATKDNGLTLFCPVDAAVDAFL----PKY 242
NLTELLS F L S + + N + G+T+F P D DAF P
Sbjct: 46 NLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKD---DAFKAQKNPPL 102
Query: 243 KNLTAKGKAAILLYHAVPDYYSLQLLK--SNSGKVSTLATASVAKKDYSYDVSNDRDSVL 300
NLT ++L+HA+P YYSL K S SG VST A YS ++ +V
Sbjct: 103 SNLTKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVSTFAGG-----QYSLKFTDVSGTVR 157
Query: 301 LDTKVNSASVTATVKDADPLAVYAISKFLQPKELF 335
+D+ V+++V DP+AVY +++ L P+ +F
Sbjct: 158 IDSLWTRTKVSSSVFSTDPVAVYQVNRVLLPEAIF 192
>AT2G20520.1 | chr2:8840663-8841406 FORWARD LENGTH=248
Length = 247
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 12/123 (9%)
Query: 220 TKDNGLTLFCPVDAAVDAFLPKYKN-LTAKGKAAILLYHAVPDYYSLQLLKSNSGKVSTL 278
+ D G+T+F P D A + P N LT + + ++LYH +P YYSL L S V T
Sbjct: 71 SSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDLLLASNPVRTQ 130
Query: 279 ATAS---VAKKDYSYDVSNDRDSV---LLDTKVNSASVTATVKDADPLAVYAISKFLQPK 332
AT V +++ +++ +V +++T++N+A ++ PLAVY + L P+
Sbjct: 131 ATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNA-----LRQQFPLAVYVVDSVLLPE 185
Query: 333 ELF 335
ELF
Sbjct: 186 ELF 188
>AT5G44130.1 | chr5:17761128-17761871 FORWARD LENGTH=248
Length = 247
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 217 INATKDNGLTLFCPVDAAVDAFLPKYKN-LTAKGKAAILLYHAVPDYYSLQLLKSNSGKV 275
IN++ + G+T+ P D A P N L+ + ++LYH P +Y+L+ L S S V
Sbjct: 67 INSSSE-GMTVLAPTDNAFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDLLSVSNPV 125
Query: 276 STLATASVAKKDYSYDVSNDRDSVLLDTKVNSASVTATVKDADPLAVYAISKFLQPKELF 335
T A+ Y + + + V + T V ++ +++ PLAVY + L P+E+F
Sbjct: 126 RTQASGRDVGGVYGLNFTGQGNQVNVSTGVVETRLSTSLRQERPLAVYVVDMVLLPEEMF 185
>AT1G03870.1 | chr1:982625-983368 REVERSE LENGTH=248
Length = 247
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 7/151 (4%)
Query: 190 NLTELLSKK-YCKNFAGLL---ASNADVYSNINATKDNGLTLFCPVDAAVDAFLPKYKN- 244
NLT +L K F LL + V +N++ + G+T+F P D A P N
Sbjct: 39 NLTAILEKGGQFTTFIHLLNITQVGSQVNIQVNSSSE-GMTVFAPTDNAFQNLKPGTLNQ 97
Query: 245 LTAKGKAAILLYHAVPDYYSLQLLKSNSGKVSTLATASVAKKDYSYDVSNDRDSVLLDTK 304
L+ + ++LYH P YYS+ L S S V T A+ Y + + + + + T
Sbjct: 98 LSPDDQVKLILYHVSPKYYSMDDLLSVSNPVRTQASGR-DNGVYGLNFTGQTNQINVSTG 156
Query: 305 VNSASVTATVKDADPLAVYAISKFLQPKELF 335
++ +++ PLAVY + L P E+F
Sbjct: 157 YVETRISNSLRQQRPLAVYVVDMVLLPGEMF 187
>AT5G60490.1 | chr5:24325916-24326665 REVERSE LENGTH=250
Length = 249
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Query: 190 NLTELLSKK-YCKNFAGLLASNA---DVYSNINATKDNGLTLFCPVDAAVDAFLPKYKN- 244
N+T++L K F LL S +Y +N DNG+T+F P D++ N
Sbjct: 39 NVTKILEKAGQFTVFIRLLKSTGVANQLYGQLN-NSDNGITIFAPSDSSFTGLKAGTLNS 97
Query: 245 LTAKGKAAILLYHAVPDYYSLQLLKSNSGKVSTLATASVAKKDYSYDVSNDRDSVLLDTK 304
LT + + ++ +H +P Y S ++ S + T A S A + +V+ ++V + +
Sbjct: 98 LTDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDS-ADGHFPLNVTTSGNTVNITSG 156
Query: 305 VNSASVTATVKDADPLAVYAISKFLQPKELF 335
V + +V+ V LAVY + K L P+++F
Sbjct: 157 VTNTTVSGNVYSDGQLAVYQVDKVLLPQQVF 187
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.130 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,239,862
Number of extensions: 230657
Number of successful extensions: 483
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 459
Number of HSP's successfully gapped: 14
Length of query: 415
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 314
Effective length of database: 8,337,553
Effective search space: 2617991642
Effective search space used: 2617991642
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 113 (48.1 bits)