Os05g0459700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Beta-Ig-H3/fasciclin domain containing protein.
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Os05g0459700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Beta-Ig-H3/fasciclin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 282.27 | 0.789 | 9.33 | -0.536 | 1.11 | -1.58 | 0.00115 | -1.81 | -1.3 | 9.48 | 21.4 | 1566 | -- | -- |
| 287.53 | 0.79 | 9.26 | -0.208 | 1.1 | -1.31 | 0.0778 | -- | -1.17 | 9.27 | 22.1 | 1400 | -- | -- |
| 282.13 | 0.782 | 9.32 | -0.532 | 1.11 | -1.54 | -- | -1.74 | -1.3 | 9.47 | 21.5 | 1563 | -- | -- |
| 286.27 | 0.788 | 9.27 | -0.256 | 0.939 | -1.23 | -- | -- | -1.2 | 9.07 | 22.25 | 1001 | -- | -- |
| 327.78 | 0.843 | 9.31 | -0.442 | -- | -1.41 | -- | -0.648 | -1.2 | -- | 22.2 | 789 | -- | -- |
| 349.99 | 0.877 | 9.36 | -0.67 | 1.11 | -- | -0.0366 | -- | -1.61 | 9.52 | -- | -- | -- | -- |
| 350 | 0.876 | 9.36 | -0.672 | 1.11 | -- | -- | -- | -1.61 | 9.52 | -- | -- | -- | -- |
| 328.89 | 0.845 | 9.28 | -0.216 | -- | -1.42 | -- | -- | -1.13 | -- | 22.3 | 791 | -- | -- |
| 287.85 | 0.79 | 9.26 | -- | 0.942 | -1.31 | -- | -- | -1.16 | 9.08 | 22.15 | 1024 | -- | -- |
| 423.1 | 0.961 | 9.39 | -0.68 | -- | -- | -- | -- | -1.61 | -- | -- | -- | -- | -- |
| 361.9 | 0.89 | 9.34 | -- | 1.11 | -- | -- | -- | -1.54 | 9.57 | -- | -- | -- | -- |
| 330.05 | 0.846 | 9.28 | -- | -- | -1.45 | -- | -- | -1.1 | -- | 22.27 | 793 | -- | -- |
| 435.28 | 0.974 | 9.37 | -- | -- | -- | -- | -- | -1.53 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 275.61 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 5 | 277.82 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 13 | 280.14 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 6 |
| 14 | 280.19 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 16 | 280.38 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 17 | 280.39 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 28 | 282.39 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 30 | 282.53 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 38 | 284.91 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 39 | 285.07 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 44 | 286.04 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 45 | 286.16 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 53 | 287.89 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 56 | 288.28 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 58 | 288.84 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 13 | 14 |
| 62 | 288.99 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 67 | 289.22 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 73 | 289.51 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 15 | 7 |
| 85 | 289.86 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 16 | NA |
| 97 | 290.14 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 107 | 290.51 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 114 | 290.58 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 132 | 290.92 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 146 | 291.31 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 160 | 291.78 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 162 | 291.82 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 168 | 291.89 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 169 | 291.91 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 170 | 291.91 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 183 | 292.04 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 218 | 292.86 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 220 | 292.87 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 222 | 292.98 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 238 | 293.32 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 247 | 293.42 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 269 | 293.72 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 273 | 293.82 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 274 | 293.82 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 289 | 294.02 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 298 | 294.14 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 323 | 294.52 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 327 | 294.59 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 328 | 294.59 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 342 | 294.79 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 350 | 294.89 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 19 |
| 355 | 294.94 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 363 | 295.07 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 364 | 295.07 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 367 | 295.10 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 373 | 295.17 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 375 | 295.17 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 3 |
| 387 | 295.26 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 401 | 295.40 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 408 | 295.44 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 409 | 295.44 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 415 | 295.49 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 19 |
| 438 | 295.82 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 470 | 296.07 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 483 | 296.16 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 13 | 11 |
| 507 | 296.34 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 513 | 296.38 | temperature | 25.0 | 1440 | < th | dose dependent | no | NA | NA |
| 521 | 296.46 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 546 | 296.63 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 16 |
| 557 | 296.68 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 13 | 11 |
| 559 | 296.69 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 567 | 296.73 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 621 | 296.97 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 637 | 297.04 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 14 |
| 683 | 297.25 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 687 | 297.26 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 14 | 17 |
| 698 | 297.30 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 701 | 297.30 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 724 | 297.36 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 9 |
| 726 | 297.36 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 16 |
| 735 | 297.40 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 10 | 21 |
| 764 | 297.53 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 788 | 297.62 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 811 | 297.74 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 14 |
| 823 | 297.77 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 841 | 297.85 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 9 |
| 880 | 297.97 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 911 | 298.10 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 915 | 298.12 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 14 |
| 916 | 298.13 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 9 |
| 950 | 298.24 | wind | 3.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 993 | 298.42 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 997 | 298.46 | wind | 3.0 | 14400 | < th | dose dependent | sin | 7 | NA |