BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0434300 Os08g0434300|AK058477
(356 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0434300 Similar to Malate dehydrogenase precursor (EC ... 716 0.0
Os01g0829800 Similar to Malate dehydrogenase precursor (EC ... 675 0.0
Os07g0630800 Similar to Nodule-enhanced malate dehydrogenase 485 e-137
Os01g0649100 Malate dehydrogenase 416 e-116
Os12g0632700 Similar to Malate dehydrogenase, glyoxysomal p... 412 e-115
Os05g0574400 Similar to Malate dehydrogenase 407 e-114
Os03g0773800 Similar to Malate dehydrogenase, glyoxysomal p... 402 e-112
AK109028 373 e-103
Os02g0105400 Similar to L-lactate dehydrogenase A (EC 1.1.1... 82 8e-16
Os04g0551200 Similar to Cytoplasmic malate dehydrogenase 70 2e-12
Os06g0104900 Similar to L-lactate dehydrogenase B (EC 1.1.1... 70 3e-12
>Os08g0434300 Similar to Malate dehydrogenase precursor (EC 1.1.1.37)
Length = 356
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/356 (100%), Positives = 356/356 (100%)
Query: 1 GSSFLGRNASLRASVAPRIVPKAKSGSQISPEASYKVAVLGAAGGIGQPLGLLIKMSPLV 60
GSSFLGRNASLRASVAPRIVPKAKSGSQISPEASYKVAVLGAAGGIGQPLGLLIKMSPLV
Sbjct: 1 GSSFLGRNASLRASVAPRIVPKAKSGSQISPEASYKVAVLGAAGGIGQPLGLLIKMSPLV 60
Query: 61 SELHLYDIANVKGVAADLSHCNTPSQVLDFTGPSELANCLKGVDVVVIPAGVPRKPGMTR 120
SELHLYDIANVKGVAADLSHCNTPSQVLDFTGPSELANCLKGVDVVVIPAGVPRKPGMTR
Sbjct: 61 SELHLYDIANVKGVAADLSHCNTPSQVLDFTGPSELANCLKGVDVVVIPAGVPRKPGMTR 120
Query: 121 DDLFNINASIVKSLVEAVADNCPEAFIHIISNPVNSTVPIAAEVLKQKGVYNPKKLFGVT 180
DDLFNINASIVKSLVEAVADNCPEAFIHIISNPVNSTVPIAAEVLKQKGVYNPKKLFGVT
Sbjct: 121 DDLFNINASIVKSLVEAVADNCPEAFIHIISNPVNSTVPIAAEVLKQKGVYNPKKLFGVT 180
Query: 181 TLDVVRANTFVAQKKNLKLIDVDVPVVGGHAGITILPLLSKTMPSVTFTDEETEQLTKRI 240
TLDVVRANTFVAQKKNLKLIDVDVPVVGGHAGITILPLLSKTMPSVTFTDEETEQLTKRI
Sbjct: 181 TLDVVRANTFVAQKKNLKLIDVDVPVVGGHAGITILPLLSKTMPSVTFTDEETEQLTKRI 240
Query: 241 QNAGTEVVEAKAGAGSATLSMAYAAARFVESSLRALAGDPDVYECTFVQSELTELPFFAS 300
QNAGTEVVEAKAGAGSATLSMAYAAARFVESSLRALAGDPDVYECTFVQSELTELPFFAS
Sbjct: 241 QNAGTEVVEAKAGAGSATLSMAYAAARFVESSLRALAGDPDVYECTFVQSELTELPFFAS 300
Query: 301 RVKLGKNGVESIISADLEGVTEYEAKALEALKSELKASIEKGIEFVHKQQTAAASV 356
RVKLGKNGVESIISADLEGVTEYEAKALEALKSELKASIEKGIEFVHKQQTAAASV
Sbjct: 301 RVKLGKNGVESIISADLEGVTEYEAKALEALKSELKASIEKGIEFVHKQQTAAASV 356
>Os01g0829800 Similar to Malate dehydrogenase precursor (EC 1.1.1.37)
Length = 396
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/351 (94%), Positives = 343/351 (97%)
Query: 5 LGRNASLRASVAPRIVPKAKSGSQISPEASYKVAVLGAAGGIGQPLGLLIKMSPLVSELH 64
LG+NASLR+S++PRIVPKA SGS ISPEASYKVAVLGAAGGIGQPLGLLIKMSPLVS LH
Sbjct: 46 LGQNASLRSSISPRIVPKANSGSHISPEASYKVAVLGAAGGIGQPLGLLIKMSPLVSALH 105
Query: 65 LYDIANVKGVAADLSHCNTPSQVLDFTGPSELANCLKGVDVVVIPAGVPRKPGMTRDDLF 124
LYDIANVKGVAADLSHCNTPSQVLDFTGPSELANCLKGVDVVVIPAGVPRKPGMTRDDLF
Sbjct: 106 LYDIANVKGVAADLSHCNTPSQVLDFTGPSELANCLKGVDVVVIPAGVPRKPGMTRDDLF 165
Query: 125 NINASIVKSLVEAVADNCPEAFIHIISNPVNSTVPIAAEVLKQKGVYNPKKLFGVTTLDV 184
NINASIVK+LVEAVADNCPEAFIHIISNPVNSTVPIAAEVLKQKGVYNPKKLFGVTTLDV
Sbjct: 166 NINASIVKTLVEAVADNCPEAFIHIISNPVNSTVPIAAEVLKQKGVYNPKKLFGVTTLDV 225
Query: 185 VRANTFVAQKKNLKLIDVDVPVVGGHAGITILPLLSKTMPSVTFTDEETEQLTKRIQNAG 244
VRANTF+AQKKNLKLIDVDVPVVGGHAGITILPLLSKT PSVTFT+EETE+LT+RIQNAG
Sbjct: 226 VRANTFIAQKKNLKLIDVDVPVVGGHAGITILPLLSKTRPSVTFTNEETEELTRRIQNAG 285
Query: 245 TEVVEAKAGAGSATLSMAYAAARFVESSLRALAGDPDVYECTFVQSELTELPFFASRVKL 304
TEVVEAKAGAGSATLSMAYAAARFVESSLRALAGDPDVYECTFVQSELTEL FFASRVKL
Sbjct: 286 TEVVEAKAGAGSATLSMAYAAARFVESSLRALAGDPDVYECTFVQSELTELLFFASRVKL 345
Query: 305 GKNGVESIISADLEGVTEYEAKALEALKSELKASIEKGIEFVHKQQTAAAS 355
GKNGVESIIS+DLEGVTEYEAKALE+LK ELKASIEKGIEFVHKQQ AA S
Sbjct: 346 GKNGVESIISSDLEGVTEYEAKALESLKPELKASIEKGIEFVHKQQAAATS 396
>Os07g0630800 Similar to Nodule-enhanced malate dehydrogenase
Length = 404
Score = 485 bits (1249), Expect = e-137, Method: Compositional matrix adjust.
Identities = 240/331 (72%), Positives = 277/331 (83%), Gaps = 6/331 (1%)
Query: 25 SGSQISPEAS-YKVAVLGAAGGIGQPLGLLIKMSPLVSELHLYDIANVKGVAADLSHCNT 83
+G+++ +A YKVA+LGAAGGIGQPL LL+KMSPLVS LHLYDIANV GV ADL HCNT
Sbjct: 67 AGNRVVAQAGGYKVAILGAAGGIGQPLSLLVKMSPLVSALHLYDIANVDGVTADLGHCNT 126
Query: 84 PSQVLDFTGPSELANCLKGVDVVVIPAGVPRKPGMTRDDLFNINASIVKSLVEAVADNCP 143
P++V FTG ELA CL GVDVVVIPAGVPRKPGMTRDDLF INA IV+ LVEAVAD+ P
Sbjct: 127 PAKVAGFTGKEELAGCLAGVDVVVIPAGVPRKPGMTRDDLFGINAGIVRELVEAVADHAP 186
Query: 144 EAFIHIISNPVNSTVPIAAEVLKQKGVYNPKKLFGVTTLDVVRANTFVAQKKNLKLIDVD 203
A +H+ISNPVNSTVPIAAEVLK+KGVY+P+KLFGVTTLDVVRANTFVA+ K L L DVD
Sbjct: 187 AALVHVISNPVNSTVPIAAEVLKRKGVYDPRKLFGVTTLDVVRANTFVAEMKGLPLADVD 246
Query: 204 VPVVGGHAGITILPLLSKTMPSVTFTDEETEQLTKRIQNAGTEVVE--AKAGAGSATLSM 261
VPVVGGHA TILPLLSK P FTDEE E LT+RIQNAGTEVVE AKAG GSATLSM
Sbjct: 247 VPVVGGHAAATILPLLSKARPKTAFTDEEVEALTRRIQNAGTEVVEAKAKAGGGSATLSM 306
Query: 262 AYAAARFVESSLRALAGDPDVYECTFVQSE-LTELPFFASRVKLGKNGVESIIS--ADLE 318
AYAAARF+E+SLR L GD DVYEC++VQ + + ELPFFA RVKLG++GVE + + A+L
Sbjct: 307 AYAAARFLEASLRGLDGDADVYECSYVQCQAVPELPFFACRVKLGRDGVEEVAAAGAELR 366
Query: 319 GVTEYEAKALEALKSELKASIEKGIEFVHKQ 349
G+TE+EA+ALEALK +LK SI+KG+ + +Q
Sbjct: 367 GLTEFEARALEALKPQLKKSIDKGVAYAQQQ 397
>Os01g0649100 Malate dehydrogenase
Length = 340
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/333 (62%), Positives = 255/333 (76%), Gaps = 3/333 (0%)
Query: 16 APRIVPKAKSGSQISPEASYKVAVLGAAGGIGQPLGLLIKMSPLVSELHLYDIANVKGVA 75
A +++ + + S S + KVA+LGAAGGIGQPL LL+K++PLVS L LYDIA GVA
Sbjct: 9 ASQVLRRRRGYSSASGQPERKVAILGAAGGIGQPLSLLMKLNPLVSSLSLYDIAGTPGVA 68
Query: 76 ADLSHCNTPSQVLDFTGPSELANCLKGVDVVVIPAGVPRKPGMTRDDLFNINASIVKSLV 135
AD+SH N P+QV F G +L L+G D+V+IPAGVPRKPGMTRDDLFNINA IVK+L
Sbjct: 69 ADVSHINAPAQVKGFMGDDQLGEALEGSDIVIIPAGVPRKPGMTRDDLFNINAGIVKNLC 128
Query: 136 EAVADNCPEAFIHIISNPVNSTVPIAAEVLKQKGVYNPKKLFGVTTLDVVRANTFVAQKK 195
A+A CP A +++ISNPVNSTVPIAAEV K+ G Y+ KKLFGVTTLDVVRA TF A K
Sbjct: 129 TAIAKYCPNALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKA 188
Query: 196 NLKLIDVDVPVVGGHAGITILPLLSKTMPSVT-FTDEETEQLTKRIQNAGTEVVEAKAGA 254
N+ + DV+VPVVGGHAGITILPL S+ P+ +DE+ + LTKR Q+ GTEVVEAKAG
Sbjct: 189 NVPVTDVNVPVVGGHAGITILPLFSQATPATNALSDEDIKALTKRTQDGGTEVVEAKAGK 248
Query: 255 GSATLSMAYAAARFVESSLRALAGDPDVYECTFVQSELTELPFFASRVKLGKNGVESIIS 314
GSATLSMAYA A F + L+ L G PDV EC+FVQS +TELPFFAS+VKLGKNGVE ++
Sbjct: 249 GSATLSMAYAGAVFANACLKGLNGVPDVVECSFVQSTVTELPFFASKVKLGKNGVEEVLG 308
Query: 315 ADLEGVTEYEAKALEALKSELKASIEKGIEFVH 347
L ++++E + LE LK ELKASIEKGI+F +
Sbjct: 309 --LGQLSDFEKEGLENLKGELKASIEKGIKFAN 339
>Os12g0632700 Similar to Malate dehydrogenase, glyoxysomal precursor (EC
1.1.1.37)
Length = 356
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 200/314 (63%), Positives = 246/314 (78%), Gaps = 2/314 (0%)
Query: 35 YKVAVLGAAGGIGQPLGLLIKMSPLVSELHLYDIANVKGVAADLSHCNTPSQVLDFTGPS 94
+KVA+LGA+GGIGQPL LL+KM+PLVS LHLYD+ N GV AD+SH NT + V F G
Sbjct: 45 FKVAILGASGGIGQPLALLMKMNPLVSVLHLYDVVNTPGVTADISHMNTGAVVRGFLGKP 104
Query: 95 ELANCLKGVDVVVIPAGVPRKPGMTRDDLFNINASIVKSLVEAVADNCPEAFIHIISNPV 154
+L N L G+D+V+IPAGVPRKPGMTRDDLFNINA IV++L E +A CP A +++ISNPV
Sbjct: 105 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVNVISNPV 164
Query: 155 NSTVPIAAEVLKQKGVYNPKKLFGVTTLDVVRANTFVAQKKNLKLIDVDVPVVGGHAGIT 214
NSTVPIAAEV K+ G Y+PK+L GVTTLDVVRANTFVA+ L DV+VPV+GGHAG+T
Sbjct: 165 NSTVPIAAEVFKKAGTYDPKRLLGVTTLDVVRANTFVAEVLGLDPRDVNVPVIGGHAGVT 224
Query: 215 ILPLLSKTMPSVTFTDEETEQLTKRIQNAGTEVVEAKAGAGSATLSMAYAAARFVESSLR 274
ILPLLS+ P +FT EE LT RIQN GTEVVEAKAGAGSATLSMAYAA++F ++ LR
Sbjct: 225 ILPLLSQVNPPCSFTSEEISYLTTRIQNGGTEVVEAKAGAGSATLSMAYAASKFADACLR 284
Query: 275 ALAGDPDVYECTFVQSELTELPFFASRVKLGKNGVESIISADLEGVTEYEAKALEALKSE 334
L GD + EC+FV S++TELPFFAS+V+LG+ G+E I+S L + E+E LE K E
Sbjct: 285 GLRGDAGIVECSFVASQVTELPFFASKVRLGRCGIEEILS--LGPLNEFERAGLEKAKKE 342
Query: 335 LKASIEKGIEFVHK 348
L SI+KG+ F++K
Sbjct: 343 LAESIQKGVAFINK 356
>Os05g0574400 Similar to Malate dehydrogenase
Length = 340
Score = 407 bits (1046), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/313 (65%), Positives = 245/313 (78%), Gaps = 3/313 (0%)
Query: 36 KVAVLGAAGGIGQPLGLLIKMSPLVSELHLYDIANVKGVAADLSHCNTPSQVLDFTGPSE 95
KVA+LGAAGGIGQPL LL+K++PLVS L LYDIA GVAAD+SH N+P+ V F G +
Sbjct: 28 KVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIAGTPGVAADVSHINSPALVKGFVGEEQ 87
Query: 96 LANCLKGVDVVVIPAGVPRKPGMTRDDLFNINASIVKSLVEAVADNCPEAFIHIISNPVN 155
L L+G DVV+IPAGVPRKPGMTRDDLFNINA IVK L A++ CP A +++ISNPVN
Sbjct: 88 LGEALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKGLCTAISKYCPNALVNMISNPVN 147
Query: 156 STVPIAAEVLKQKGVYNPKKLFGVTTLDVVRANTFVAQKKNLKLIDVDVPVVGGHAGITI 215
STVPIAAEV K+ G Y+ KKLFGVTTLDVVRA TF A K N+ + +V+VPVVGGHAGITI
Sbjct: 148 STVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKANVPVTEVNVPVVGGHAGITI 207
Query: 216 LPLLSKTMP-SVTFTDEETEQLTKRIQNAGTEVVEAKAGAGSATLSMAYAAARFVESSLR 274
LPL S+ P S + E+ + LTKR Q+ GTEVVEAKAG GSATLSMAYA A F ++ L+
Sbjct: 208 LPLFSQATPASNALSHEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLK 267
Query: 275 ALAGDPDVYECTFVQSELTELPFFASRVKLGKNGVESIISADLEGVTEYEAKALEALKSE 334
L G PDV EC+FVQS +TELPFFAS+V+LGKNGVE ++ L ++E+E + LE LK E
Sbjct: 268 GLNGVPDVVECSFVQSTVTELPFFASKVRLGKNGVEEVLG--LGQLSEFEKEGLENLKGE 325
Query: 335 LKASIEKGIEFVH 347
LK+SIEKGI+F H
Sbjct: 326 LKSSIEKGIKFAH 338
>Os03g0773800 Similar to Malate dehydrogenase, glyoxysomal precursor (EC
1.1.1.37) (mbNAD-MDH)
Length = 354
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/348 (58%), Positives = 259/348 (74%), Gaps = 8/348 (2%)
Query: 7 RNASLRASVAPRIVPKAKSGSQISP------EASYKVAVLGAAGGIGQPLGLLIKMSPLV 60
R A + A ++P P+ + G + +P +KVAVLGAAGGIGQPL LL+K++PLV
Sbjct: 9 RIARVAAHLSPSPRPQMEEGVRPAPCRAKGGAPGFKVAVLGAAGGIGQPLSLLMKLNPLV 68
Query: 61 SELHLYDIANVKGVAADLSHCNTPSQVLDFTGPSELANCLKGVDVVVIPAGVPRKPGMTR 120
S LHLYD+ N GV AD+SH +T + V F GP++L L G+D+V+IPAG+PRKPGMTR
Sbjct: 69 SVLHLYDVVNTPGVTADVSHMDTTAVVRGFLGPNQLEAALTGMDLVIIPAGLPRKPGMTR 128
Query: 121 DDLFNINASIVKSLVEAVADNCPEAFIHIISNPVNSTVPIAAEVLKQKGVYNPKKLFGVT 180
DDLFN NA IV+SL E VA CP A +++ISNPVNSTVPIAAEV K+ G Y+PK+L GVT
Sbjct: 129 DDLFNKNAGIVRSLCEGVAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVT 188
Query: 181 TLDVVRANTFVAQKKNLKLIDVDVPVVGGHAGITILPLLSKTMPSVTFTDEETEQLTKRI 240
TLDV RANTFVA+ + DV+VPVVGGHAG+TILPLLS+ P +FT +E LTKRI
Sbjct: 189 TLDVARANTFVAEVLGIDPKDVNVPVVGGHAGVTILPLLSQVHPPCSFTPDEISYLTKRI 248
Query: 241 QNAGTEVVEAKAGAGSATLSMAYAAARFVESSLRALAGDPDVYECTFVQSELTELPFFAS 300
QN GTEVVEAKAGAGSATLSMA+AAA+F ++ LRA+ GD V EC++V S +TELPFFA+
Sbjct: 249 QNGGTEVVEAKAGAGSATLSMAFAAAKFGDACLRAMRGDAGVVECSYVASAVTELPFFAT 308
Query: 301 RVKLGKNGVESIISADLEGVTEYEAKALEALKSELKASIEKGIEFVHK 348
+V+LG+ G E ++ L + ++E LE K EL SI+KGI+F++K
Sbjct: 309 KVRLGRAGAEEVLP--LGPLNDFERAGLEMAKKELMESIQKGIDFMNK 354
>AK109028
Length = 345
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/347 (60%), Positives = 257/347 (74%), Gaps = 10/347 (2%)
Query: 7 RNASLRASVAPRIVPKAKSGSQISPEAS--YKVAVLGAAGGIGQPLGLLIKMSPLVSELH 64
RNA+ R +A S ++ S A+ KVAVLGAAGGIGQPL LL+KM+P VS+L
Sbjct: 3 RNAAQRV-LAQSWKAMQSSAAEFSTRAAKERKVAVLGAAGGIGQPLSLLMKMNPQVSQLS 61
Query: 65 LYDIANVKGVAADLSHCNTPSQVLDFTGPSELANCLKGVDVVVIPAGVPRKPGMTRDDLF 124
LYD+A +GV AD+SH N+ +QV + G ++LA LKG D+V+IPAGVPRKPGMTRDDLF
Sbjct: 62 LYDVAGTRGVGADVSHINSRAQVKGYEGDAQLAEALKGCDLVIIPAGVPRKPGMTRDDLF 121
Query: 125 NINASIVKSLVEAVADNCPEAFIHIISNPVNSTVPIAAEVLKQKGVYNPKKLFGVTTLDV 184
INA IVK LVEA +CP A ++IISNPVNSTVPIAAE LK+ GVY+ +K+ GVTTLDV
Sbjct: 122 KINAGIVKGLVEACGKHCPGAILNIISNPVNSTVPIAAEALKKMGVYDKRKVMGVTTLDV 181
Query: 185 VRANTFVAQKKNLKLIDVDVPVVGGHAGITILPLLSK---TMPSVTFTDEETEQLTKRIQ 241
VRA TF A+K L + VDVPVVGGHAGITILPL S+ TMPS T + E E LTKR Q
Sbjct: 182 VRAKTFYAEKLGLDVGQVDVPVVGGHAGITILPLFSQATPTMPSNT-SAEVIEALTKRTQ 240
Query: 242 NAGTEVVEAKAGAGSATLSMAYAAARFVESSLRALAGDPDVYECTFVQSELTELPFFASR 301
+ GTEVVEAKAG GSATLSMAYAAA F ++ LR + G ECTFV+S++T+LP+FA++
Sbjct: 241 DGGTEVVEAKAGKGSATLSMAYAAALFADACLRGMNG-ATATECTFVESDVTDLPYFATK 299
Query: 302 VKLGKNGVESIISADLEGVTEYEAKALEALKSELKASIEKGIEFVHK 348
VKLG GVE+I + ++ YE +A AL EL+ASIEKGI+FV +
Sbjct: 300 VKLGTEGVETI--QPVGSMSAYEQEAYNALTPELQASIEKGIKFVRE 344
>Os02g0105400 Similar to L-lactate dehydrogenase A (EC 1.1.1.27) (LDH-A)
Length = 392
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 144/314 (45%), Gaps = 36/314 (11%)
Query: 36 KVAVLGAAGGIGQPLGLLIKMSPLVSELHLYDIA--NVKGVAADLSHCNTPSQVLDFTGP 93
K++V+GA G +G + I + E+ L D ++G DL H +
Sbjct: 80 KISVIGA-GNVGMAIAQTILTRDMADEIALVDAVPDKLRGEMLDLQHAAAFLPRVRLVSD 138
Query: 94 SELANCLKGVDVVVIPAGVPRKPGMTRDDLFNINASIVKSLVEAVADNCPEAFIHIISNP 153
++LA +G D+ ++ AG + PG +R +L N ++ + +V A+A++ PEA + I+SNP
Sbjct: 139 TDLA-VTRGSDLAIVTAGARQIPGESRLNLLQRNVALFRKIVPALAEHSPEALLLIVSNP 197
Query: 154 VNSTVPIAAEVLKQKGVYNPKKLFGVTTLDVVRANTFVAQKKNLKLIDVDVPVVGGH--- 210
V+ +A K G + + T LD R +A+ + DV +VG H
Sbjct: 198 VDVLTYVA---WKLSGFPASRVIGSGTNLDSSRFRFLLAEHLQVNAQDVQAYMVGEHGDS 254
Query: 211 ----------AGITILPLLSKTMPSVTFTDEETEQLTKRIQNAGTEVVEAKAGAGSATLS 260
AG+ +L L ++ S F +E E + + + ++ EV+ K G + +
Sbjct: 255 SVAIWSSMSVAGMPVLKSLRESHQS--FDEEALEGIRRAVVDSAYEVISLK---GYTSWA 309
Query: 261 MAYAAARFVESSLRALAGDPDVYECTFVQSELTELP-----FFASRVKLGKNGVESIISA 315
+ Y+ A S LR ++ + + S +P F + +LG+ GV + A
Sbjct: 310 IGYSVASLAASLLR---DQHRIHPVSVLASGFHGIPQDHEVFLSLPARLGRAGVLGV--A 364
Query: 316 DLEGVTEYEAKALE 329
++E +TE EA+ L
Sbjct: 365 EME-LTEEEARRLR 377
>Os04g0551200 Similar to Cytoplasmic malate dehydrogenase
Length = 352
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 113/245 (46%), Gaps = 31/245 (12%)
Query: 31 PEASYKVAVLGAAGGIGQPL------GLLIKM-SPLVSELHLYDI---AN-VKGVAADLS 79
P+ KV V GAAG IG + GL++ P+V LHL D+ AN + GV +L
Sbjct: 23 PKKPVKVLVTGAAGQIGYAIVAMIARGLMLGADQPVV--LHLLDLPVAANALNGVRMELI 80
Query: 80 HCNTPSQVLDFTGPSELANCLKGVDVVVIPAGVPRKPGMTRDDLFNINASIVKSLVEAVA 139
P + S+ A KGV+V ++ G PR+ GM R DL + N +I KS A+
Sbjct: 81 DAALP-LLRGVVATSDEAEAFKGVNVAIVIGGWPRRDGMERKDLISKNVTIYKSQASALH 139
Query: 140 DN-CPEAFIHIISNPVNSTVPIAAEVLKQKGVYNP-KKLFGVTTLDVVRANTFVAQKKNL 197
+ P + +++NP N+ A VLK+ P K + +T LD RA VA+K N+
Sbjct: 140 QHAAPNCKVLVVANPANTN----ALVLKEFAPAIPAKNITCLTRLDHNRALGQVAEKLNV 195
Query: 198 KLIDVDVPVVGGHAGITILPLLSKTMPSVT---------FTDE--ETEQLTKRIQNAGTE 246
+ DV ++ G+ T P S S DE E+ +Q G
Sbjct: 196 HVGDVKNAIIWGNHSSTQFPDASHATVSTDRGERPVRELIADEIWLREEFVTDVQQRGAA 255
Query: 247 VVEAK 251
V++A+
Sbjct: 256 VIKAR 260
>Os06g0104900 Similar to L-lactate dehydrogenase B (EC 1.1.1.27) (LDH-B)
(Fragment)
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 113/258 (43%), Gaps = 27/258 (10%)
Query: 36 KVAVLGAAGGIGQPLGLLIKMSPLVSELHLYDIA--NVKGVAADLSHCNTPSQVLDFTGP 93
K++V+GA G +G + I L E+ L D V+G DL H ++
Sbjct: 40 KISVIGA-GNVGMAIAQTILTQDLADEIVLIDAVADKVRGEMLDLQHAAAFLPRVNIVSG 98
Query: 94 SELANCLKGVDVVVIPAGVPRKPGMTRDDLFNINASIVKSLVEAVADNCPEAFIHIISNP 153
+E+ + + D+V++ AG + PG TR +L N S+ + +V A A+ PE+ + I+SNP
Sbjct: 99 TEV-SLTRSSDLVIVTAGARQIPGETRLNLLQRNVSLFRKIVPAAAEASPESVLVIVSNP 157
Query: 154 VNSTVPIAAEVLKQKGVYNPKKLFGVTTLDVVRANTFVAQKKNLKLIDVDVPVVGGH--- 210
V+ +A K G + + T LD R +A+ + DV +VG H
Sbjct: 158 VDVLTYVA---WKLSGFPASRVIGSGTNLDSSRFRFLLAEHLEVSAQDVQAYMVGEHGDS 214
Query: 211 ----------AGITILPLLSKTMPSVT----FTDEETEQLTKRIQNAGTEVVEAKAGAGS 256
G+ +L L K S F + E + + + + EV++ K G
Sbjct: 215 SVALWSSISVGGMPVLAHLQKNHRSAATAKKFDEAALEGIRRAVVGSAYEVIKLK---GY 271
Query: 257 ATLSMAYAAARFVESSLR 274
+ ++ Y+ A S LR
Sbjct: 272 TSWAIGYSVASIAWSLLR 289
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.131 0.359
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,613,912
Number of extensions: 423758
Number of successful extensions: 1005
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 995
Number of HSP's successfully gapped: 12
Length of query: 356
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 254
Effective length of database: 11,709,973
Effective search space: 2974333142
Effective search space used: 2974333142
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 156 (64.7 bits)