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Os03g0773800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) (mbNAD-MDH).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 15.6 (0.0172) R2 : 0.097
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.253 (0.0362) R2dN8 : 0.125 R2N8 : 0.097
σ : 0.324
deviance : 48.04
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.47 0.269 15.4 0.838 0.432 2.32 -0.223 -12.1 -0.271 23.9 1000 10 -- --
35.55 0.28 15.6 0.0316 0.418 0.186 -0.265 -- -0.27 23.9 1000 10 -- --
33.66 0.27 15.4 0.845 0.438 2.32 -- -12.1 -0.271 24 1000 15 -- --
35.65 0.278 15.6 0.0453 0.419 0.2 -- -- -0.27 0.0149 1000 2 -- --
45.14 0.315 15.5 0.767 -- 2.02 -- -10.2 -0.266 -- 1000 5 -- --
36.51 0.283 15.6 -0.00128 0.422 -- -0.252 -- -0.258 23.9 -- -- -- --
36.77 0.284 15.6 0.0084 0.423 -- -- -- -0.257 0.0549 -- -- -- --
46.62 0.319 15.6 0.0529 -- 0.213 -- -- -0.268 -- 1000 2 -- --
35.7 0.278 15.6 -- 0.42 0.194 -- -- -0.274 0.0226 1000 3 -- --
48.03 0.324 15.6 0.0217 -- -- -- -- -0.251 -- -- -- -- --
36.78 0.284 15.6 -- 0.423 -- -- -- -0.258 0.056 -- -- -- --
46.69 0.319 15.6 -- -- 0.207 -- -- -0.273 -- 1000 2 -- --
48.04 0.324 15.6 -- -- -- -- -- -0.253 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 32.31 atmosphere 1000.0 270 > th dose independent rect. 16 10
4 32.73 wind 9.0 720 < th dose dependent rect. 12 1
8 32.86 atmosphere 1000.0 10 < th dose independent rect. 11 20
9 32.87 wind 1.0 720 > th dose independent rect. 7 18
14 32.90 precipitation 0.1 1440 < th dose independent rect. 8 5
18 32.90 precipitation 0.1 1440 < th dose dependent rect. 8 5
19 32.90 temperature 10.0 10 > th dose dependent rect. 12 12
22 32.95 wind 1.0 720 > th dose independent rect. 23 2
27 32.98 temperature 10.0 720 > th dose dependent rect. 12 1
28 32.99 atmosphere 1000.0 90 > th dose independent rect. 18 10
36 33.01 temperature 20.0 720 > th dose independent rect. 4 19
40 33.05 temperature 20.0 720 > th dose independent rect. 11 11
41 33.05 atmosphere 995.0 720 > th dose independent rect. 15 20
42 33.05 atmosphere 1000.0 30 > th dose independent rect. 7 21
43 33.07 atmosphere 1000.0 270 < th dose independent rect. 10 19
48 33.10 humidity 50.0 90 > th dose dependent rect. 21 10
51 33.12 atmosphere 1000.0 270 > th dose independent sin 14 NA
54 33.12 temperature 20.0 10 > th dose dependent rect. 12 19
56 33.13 atmosphere 1000.0 270 < th dose independent rect. 13 16
62 33.14 atmosphere 1005.0 14400 < th dose independent rect. 23 1
67 33.15 radiation 10.0 14400 < th dose dependent rect. 23 1
75 33.17 radiation 30.0 270 < th dose independent rect. 15 11
78 33.17 wind 1.0 90 > th dose independent rect. 7 21
81 33.17 temperature 25.0 720 < th dose dependent rect. 11 17
91 33.19 wind 9.0 270 < th dose independent rect. 2 13
93 33.19 temperature 20.0 1440 > th dose dependent rect. 1 1
98 33.20 temperature 15.0 270 > th dose independent rect. 15 11
101 33.21 temperature 25.0 30 > th dose independent rect. 2 5
112 33.22 wind 1.0 270 > th dose independent rect. 15 11
114 33.22 temperature 10.0 270 > th dose independent rect. 2 13
115 33.22 atmosphere 1015.0 270 < th dose independent rect. 2 13
122 33.23 atmosphere 1005.0 14400 > th dose independent rect. 3 1
123 33.23 wind 1.0 720 > th dose independent rect. 23 4
126 33.23 temperature 25.0 1440 < th dose dependent rect. 20 2
149 33.26 atmosphere 995.0 720 > th dose independent rect. 15 4
153 33.26 temperature 25.0 1440 < th dose dependent rect. 17 10
155 33.27 temperature 25.0 90 > th dose independent rect. 4 2
158 33.27 temperature 20.0 270 > th dose independent rect. 11 20
167 33.28 wind 9.0 270 < th dose independent rect. 15 11
184 33.30 atmosphere 995.0 720 > th dose independent rect. 7 19
212 33.32 temperature 25.0 720 < th dose dependent sin 16 NA
218 33.33 temperature 20.0 4320 > th dose independent rect. 21 2
220 33.33 atmosphere 995.0 720 > th dose independent rect. 7 10
234 33.34 wind 9.0 14400 < th dose independent rect. 12 1
235 33.34 wind 9.0 4320 < th dose independent rect. 5 3
237 33.34 temperature 25.0 90 > th dose independent rect. 12 11
248 33.35 atmosphere 1005.0 14400 < th dose independent rect. 3 1
249 33.35 wind 1.0 720 > th dose independent rect. 7 10
253 33.35 temperature 25.0 1440 < th dose dependent rect. 1 1
284 33.37 temperature 25.0 90 > th dose dependent rect. 3 3
293 33.38 temperature 10.0 1440 > th dose independent rect. 5 3
296 33.38 temperature 30.0 1440 < th dose independent rect. 5 3
300 33.38 humidity 50.0 1440 > th dose independent rect. 5 3
305 33.38 atmosphere 995.0 1440 > th dose independent rect. 5 3
306 33.38 atmosphere 1015.0 1440 < th dose independent rect. 5 3
308 33.38 temperature 10.0 1440 > th dose independent rect. 8 21
319 33.39 precipitation 0.1 10 < th dose independent rect. 12 12
320 33.39 precipitation 0.1 720 < th dose independent rect. 23 12
326 33.39 precipitation 0.1 10 < th dose dependent rect. 12 12
327 33.39 precipitation 0.1 720 < th dose dependent rect. 23 12
334 33.39 temperature 10.0 270 > th dose dependent rect. 10 21
336 33.40 precipitation 0.1 270 < th dose independent rect. 2 13
337 33.40 atmosphere 995.0 90 > th dose independent rect. 7 14
345 33.40 precipitation 0.1 270 < th dose dependent rect. 2 13
347 33.41 wind 5.0 720 < th dose independent rect. 12 1
352 33.41 atmosphere 995.0 720 > th dose independent rect. 13 14
380 33.42 atmosphere 995.0 30 > th dose dependent rect. 16 12
393 33.43 radiation 1.0 14400 < th dose dependent rect. 1 1
403 33.44 atmosphere 1000.0 270 < th dose independent sin 16 NA
405 33.44 humidity 80.0 90 > th dose independent rect. 21 10
406 33.44 atmosphere 995.0 270 > th dose independent rect. 2 13
408 33.44 temperature 25.0 10 > th dose independent rect. 12 19
426 33.44 temperature 10.0 30 > th dose dependent rect. 1 23
441 33.45 temperature 10.0 10 > th dose dependent rect. 3 21
442 33.45 temperature 10.0 720 > th dose dependent rect. 19 21
444 33.46 temperature 20.0 4320 < th dose independent rect. 21 2
460 33.47 atmosphere 1000.0 10 > th dose independent no NA NA
462 33.47 atmosphere 1000.0 10 < th dose independent no NA NA
468 33.47 atmosphere 1000.0 10 < th dose independent rect. 1 23
469 33.47 atmosphere 1000.0 10 < th dose independent rect. 3 23
470 33.47 atmosphere 1000.0 10 < th dose independent rect. 13 23
471 33.47 atmosphere 1000.0 10 < th dose independent rect. 17 23
483 33.48 temperature 20.0 4320 > th dose independent rect. 20 4
489 33.48 atmosphere 1000.0 10 < th dose independent rect. 15 23
490 33.48 atmosphere 1000.0 10 < th dose independent rect. 21 23
497 33.48 temperature 10.0 720 > th dose dependent rect. 2 22
504 33.49 atmosphere 1005.0 14400 < th dose independent rect. 22 6
514 33.49 atmosphere 1000.0 10 < th dose independent rect. 19 23
515 33.49 atmosphere 1000.0 10 < th dose independent rect. 23 23
516 33.49 wind 9.0 14400 > th dose dependent rect. 12 1
533 33.50 wind 1.0 90 > th dose independent rect. 7 14
540 33.50 atmosphere 1000.0 10 < th dose independent rect. 5 23
552 33.50 atmosphere 1015.0 30 < th dose dependent rect. 12 19
556 33.51 atmosphere 1000.0 10 > th dose independent sin 11 NA
584 33.52 atmosphere 995.0 720 > th dose independent rect. 5 14
600 33.53 wind 3.0 43200 < th dose independent rect. 1 1
606 33.53 atmosphere 1000.0 270 > th dose independent rect. 4 23
613 33.53 temperature 10.0 720 > th dose dependent rect. 11 12
633 33.54 wind 5.0 4320 > th dose dependent rect. 20 7
649 33.55 temperature 15.0 10 > th dose independent rect. 24 12
650 33.55 atmosphere 1015.0 10 < th dose independent rect. 24 12
674 33.56 wind 1.0 30 > th dose independent rect. 4 3
676 33.56 wind 9.0 10 < th dose independent rect. 12 12
677 33.56 temperature 10.0 10 > th dose independent rect. 12 12
679 33.56 atmosphere 995.0 10 > th dose independent rect. 24 12
685 33.56 temperature 25.0 270 > th dose dependent rect. 3 1
709 33.57 wind 9.0 10 < th dose independent rect. 24 12
734 33.58 radiation 20.0 90 < th dose independent rect. 21 10
745 33.58 temperature 15.0 90 > th dose dependent rect. 3 4
759 33.59 temperature 20.0 4320 < th dose independent rect. 20 4
763 33.59 wind 9.0 90 < th dose independent rect. 21 10
778 33.59 temperature 25.0 720 < th dose dependent no NA NA
791 33.59 temperature 25.0 720 < th dose dependent rect. 24 23
793 33.60 wind 3.0 14400 > th dose independent rect. 1 2
794 33.60 temperature 10.0 90 > th dose independent rect. 21 10
795 33.60 temperature 30.0 90 < th dose independent rect. 21 10
796 33.60 humidity 50.0 90 > th dose independent rect. 21 10
799 33.60 atmosphere 995.0 90 > th dose independent rect. 21 10
803 33.60 temperature 10.0 90 > th dose independent rect. 7 14
804 33.60 atmosphere 1015.0 90 < th dose independent rect. 7 14
839 33.61 atmosphere 995.0 720 > th dose independent rect. 23 20
864 33.62 atmosphere 1000.0 270 > th dose independent no NA NA
866 33.62 atmosphere 1005.0 14400 > th dose independent rect. 11 1
873 33.62 atmosphere 995.0 720 > th dose independent rect. 23 18
877 33.62 precipitation 0.1 14400 > th dose dependent rect. 17 1
883 33.62 temperature 10.0 720 > th dose dependent rect. 12 10
901 33.63 precipitation 0.1 720 < th dose independent rect. 24 1
903 33.63 temperature 30.0 720 < th dose independent rect. 23 11
912 33.63 precipitation 0.1 720 < th dose dependent rect. 24 1
923 33.63 temperature 25.0 720 < th dose dependent rect. 16 23
940 33.64 humidity 80.0 14400 < th dose dependent rect. 5 1
965 33.65 precipitation 0.1 90 < th dose independent rect. 21 10
967 33.65 precipitation 0.1 90 < th dose independent rect. 7 14
976 33.65 temperature 20.0 10 > th dose dependent sin 14 NA
983 33.65 precipitation 0.1 90 < th dose dependent rect. 21 10
985 33.65 radiation 40.0 270 < th dose dependent rect. 15 11
987 33.65 precipitation 0.1 90 < th dose dependent rect. 7 14