BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0403300 Os08g0403300|Os08g0403300
(150 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0403300 Heavy metal transport/detoxification protein d... 263 4e-71
Os03g0383900 Heavy metal transport/detoxification protein d... 171 2e-43
Os04g0244800 Heavy metal transport/detoxification protein d... 140 3e-34
Os03g0156600 Similar to Farnesylated protein (ATFP6) 133 5e-32
Os01g0507700 Heavy metal transport/detoxification protein d... 127 2e-30
Os09g0364800 Heavy metal transport/detoxification protein d... 114 2e-26
Os03g0120400 Heavy metal transport/detoxification protein d... 87 5e-18
Os10g0537400 80 5e-16
Os01g0758000 Heavy metal transport/detoxification protein d... 76 1e-14
Os06g0542300 Heavy metal transport/detoxification protein d... 65 2e-11
Os02g0530100 Heavy metal transport/detoxification protein d... 63 6e-11
Os08g0205400 Heavy metal transport/detoxification protein d... 63 9e-11
>Os08g0403300 Heavy metal transport/detoxification protein domain containing
protein
Length = 150
Score = 263 bits (671), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 125/125 (100%), Positives = 125/125 (100%)
Query: 26 RQFNTVELKVRMDCDGCELKVRNTLANMKGVQSVEINRKQQKVTVQGMVDTQRVLRRAQS 85
RQFNTVELKVRMDCDGCELKVRNTLANMKGVQSVEINRKQQKVTVQGMVDTQRVLRRAQS
Sbjct: 26 RQFNTVELKVRMDCDGCELKVRNTLANMKGVQSVEINRKQQKVTVQGMVDTQRVLRRAQS 85
Query: 86 TGKRTELWPYVPYTNPYVAPPAAYDKKAPNGHIRRVDAVLPVTPSQEERLATLFSDDNPN 145
TGKRTELWPYVPYTNPYVAPPAAYDKKAPNGHIRRVDAVLPVTPSQEERLATLFSDDNPN
Sbjct: 86 TGKRTELWPYVPYTNPYVAPPAAYDKKAPNGHIRRVDAVLPVTPSQEERLATLFSDDNPN 145
Query: 146 ACAVM 150
ACAVM
Sbjct: 146 ACAVM 150
>Os03g0383900 Heavy metal transport/detoxification protein domain containing
protein
Length = 157
Score = 171 bits (433), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/132 (62%), Positives = 103/132 (78%), Gaps = 8/132 (6%)
Query: 26 RQFNTVELKVRMDCDGCELKVRNTLANMKGVQSVEINRKQQKVTVQGMVDTQRVLRRAQS 85
RQ TVELKVRMDCDGCELKV+N L+ +KGV+SV+INRKQQKVTV G V+ +VLR+AQS
Sbjct: 27 RQLQTVELKVRMDCDGCELKVKNALSTLKGVESVKINRKQQKVTVSGYVEASKVLRKAQS 86
Query: 86 TGKRTELWPYVPY---TNPYVAPPAAYDKKAPNGHIRRVDAVLPVTPS----QEERLATL 138
TGK++ELWPYVPY + PYVA AAYD++AP GH+R V+A S EERL L
Sbjct: 87 TGKKSELWPYVPYSAASQPYVA-AAAYDRRAPPGHVRNVEASSAAYVSGGGRTEERLTNL 145
Query: 139 FSDDNPNACAVM 150
F+D++PNAC++M
Sbjct: 146 FNDEDPNACSLM 157
>Os04g0244800 Heavy metal transport/detoxification protein domain containing
protein
Length = 155
Score = 140 bits (354), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/134 (55%), Positives = 89/134 (66%), Gaps = 11/134 (8%)
Query: 26 RQFNTVELKVRMDCDGCELKVRNTLANMKGVQSVEINRKQQKVTVQGMVDTQRVLRR-AQ 84
+QF TVE+KVR+DC+GCE K++ L +MKGV SVE+ KQ KVTV G VD +V+RR A
Sbjct: 24 KQFQTVEMKVRIDCEGCERKIKKALEDMKGVSSVEVTAKQNKVTVTGYVDAGKVMRRVAY 83
Query: 85 STGKRTELWPYVPY---TNPYVAPPAAYDKKAPNGHIRRV-----DAVLPVTPSQEERLA 136
TGKR E WPYVPY +PY P AYDKKAP G++R V A L S E R
Sbjct: 84 KTGKRVEPWPYVPYDTVAHPYA--PGAYDKKAPAGYVRNVVSDPSAAPLARASSTEVRYT 141
Query: 137 TLFSDDNPNACAVM 150
FSD+NPNAC+VM
Sbjct: 142 AAFSDENPNACSVM 155
>Os03g0156600 Similar to Farnesylated protein (ATFP6)
Length = 155
Score = 133 bits (335), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/134 (52%), Positives = 89/134 (66%), Gaps = 11/134 (8%)
Query: 26 RQFNTVELKVRMDCDGCELKVRNTLANMKGVQSVEINRKQQKVTVQGMVDTQRVLRRA-Q 84
+QF VE+KVRMDC+GCE KVR + MKGV SVE++ KQ KVTV G V+ + V+ R +
Sbjct: 24 KQFQKVEVKVRMDCEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVVGRLRR 83
Query: 85 STGKRTELWPYVPYT---NPYVAPPAAYDKKAPNGHIRRVDAVLPVTP-----SQEERLA 136
GK+ E WPYVPY +PY P AYDKKAP G++R A P +EE+LA
Sbjct: 84 RAGKKAEPWPYVPYDVVPHPYA--PGAYDKKAPPGYVRNALADPDAAPLARATEEEEKLA 141
Query: 137 TLFSDDNPNACAVM 150
+ FSD+NPN+CAVM
Sbjct: 142 SAFSDENPNSCAVM 155
>Os01g0507700 Heavy metal transport/detoxification protein domain containing
protein
Length = 151
Score = 127 bits (320), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 85/128 (66%), Gaps = 5/128 (3%)
Query: 26 RQFNTVELKVRMDCDGCELKVRNTLANMKGVQSVEINRKQQKVTVQGMVDTQRVLRRAQS 85
R TV +KV+MDC+GCE +V+N + +M+GV SV +N KQ + TV G V+ +VL R +S
Sbjct: 26 RPLQTVNIKVKMDCEGCERRVKNAVKSMRGVTSVAVNPKQSRCTVTGYVEASKVLERVKS 85
Query: 86 TGKRTELWPYVPY---TNPYVAPPAAYDKKAPNGHIRRVDAVLPVTPSQEERLATLFSDD 142
TGK E+WPYVPY T PYV AYDKKAP G +R A + + E R T+FSD+
Sbjct: 86 TGKAAEMWPYVPYTMTTYPYVG--GAYDKKAPAGFVRGNPAAMADPSAPEVRYMTMFSDE 143
Query: 143 NPNACAVM 150
N ++C++M
Sbjct: 144 NVDSCSIM 151
>Os09g0364800 Heavy metal transport/detoxification protein domain containing
protein
Length = 112
Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 71/95 (74%), Gaps = 13/95 (13%)
Query: 67 KVTVQGMVDTQRVLRRAQSTGKRTELWPYVPYT---NPYVAPPAAYDKKAPNGHIRRVDA 123
KVTVQG V+ +V++R Q+TGK+ E+WPYVPYT +PY AP AYDK+AP GH+RRVDA
Sbjct: 20 KVTVQGFVEPHKVVKRVQATGKKAEIWPYVPYTLVAHPYAAP--AYDKRAPPGHVRRVDA 77
Query: 124 VLPVTP--------SQEERLATLFSDDNPNACAVM 150
V+PV + EERL T+FSD+NPNAC++M
Sbjct: 78 VMPVASYGSAAAAAAPEERLTTMFSDENPNACSIM 112
>Os03g0120400 Heavy metal transport/detoxification protein domain containing
protein
Length = 193
Score = 86.7 bits (213), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 69/133 (51%), Gaps = 15/133 (11%)
Query: 30 TVELKVRMDCDGCELKVRNTLANMKGVQSVEINRKQQKVTVQGMVDTQRVLRRAQSTGKR 89
TVELKVRM C GCE V++ L ++GV SVE+ + +KVTV G V+ QRVL+ + GK+
Sbjct: 64 TVELKVRMCCSGCERVVKHALMKLRGVDSVEVELEMEKVTVTGYVERQRVLKEVRRAGKK 123
Query: 90 TELWP------YVPYTNPYVA------PPAAYDKKAPNGHIRRVDAVLPVTPSQEERLAT 137
E WP Y Y P Y + NG LP + ++
Sbjct: 124 AEFWPNPDLPLYFTSAKDYFHDEESFRPSYNYYRHGYNG---DKHGHLPEPHRGADPVSN 180
Query: 138 LFSDDNPNACAVM 150
LF+DD+ NAC++M
Sbjct: 181 LFNDDDVNACSIM 193
>Os10g0537400
Length = 185
Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 47/68 (69%)
Query: 27 QFNTVELKVRMDCDGCELKVRNTLANMKGVQSVEINRKQQKVTVQGMVDTQRVLRRAQST 86
TVELKVRM C+GCE VR+ LAN++GV SVE++ +KV V G VD RVLR + +
Sbjct: 51 SLQTVELKVRMCCEGCERVVRSALANLRGVDSVEVDVAMEKVRVTGYVDRGRVLREVRRS 110
Query: 87 GKRTELWP 94
GK+ E WP
Sbjct: 111 GKKAEFWP 118
>Os01g0758000 Heavy metal transport/detoxification protein domain containing
protein
Length = 158
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 69/159 (43%), Gaps = 43/159 (27%)
Query: 31 VELKVRMDCDGCELKVRNTLANMKGVQSVEINRKQQKVTVQGMVDTQRVLRRAQSTGKRT 90
VE+ V MDC GCE K+R + M+GV VEI+ ++QKVTV G V+ ++VL+ + TG+R
Sbjct: 4 VEMSVHMDCAGCEKKIRKAIQRMEGVDDVEIDMERQKVTVNGNVEQKKVLKAVRRTGRRA 63
Query: 91 ELWPYVPY---------------------------------------TNPYVAPPAAYDK 111
LWP+ PY T+ Y YD
Sbjct: 64 VLWPH-PYTGGGVVAGGTVHVLAQQQNYHQYHPGAGVQAHAAHAARPTSSYNYYKHGYDD 122
Query: 112 KAPNGHIRRVDAVLPVTPSQEERLATLFSDDNPNACAVM 150
G A V + R FSD+NP +C+VM
Sbjct: 123 SRLYGGYYHHGANSAVVGT---RATDYFSDENPQSCSVM 158
>Os06g0542300 Heavy metal transport/detoxification protein domain containing
protein
Length = 183
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 31 VELKVRMDCDGCELKVRNTLANMKGVQSVEINRKQQKVTVQGMVDTQRVLRRAQSTGKRT 90
VE+++ +DCDGCE VR L ++GV V+++R + KVTV G ++VLR A+ +G+
Sbjct: 4 VEMQMNIDCDGCEDNVRKALQRLQGVDYVDVDRVRGKVTVTGSASQKKVLRAARRSGRIA 63
Query: 91 ELWP------YVPYTNPYVAPPA 107
LWP + + Y A PA
Sbjct: 64 VLWPSAYDTDHRHHHQAYYAQPA 86
>Os02g0530100 Heavy metal transport/detoxification protein domain containing
protein
Length = 252
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 40/65 (61%)
Query: 29 NTVELKVRMDCDGCELKVRNTLANMKGVQSVEINRKQQKVTVQGMVDTQRVLRRAQSTGK 88
TV LKV M C GC VR L M+GV++ +I+ +QQKVTV+G V + V + TGK
Sbjct: 124 KTVVLKVGMSCQGCAGAVRRVLTKMEGVETFDIDMEQQKVTVKGNVKPEDVFQTVSKTGK 183
Query: 89 RTELW 93
+T W
Sbjct: 184 KTSFW 188
>Os08g0205400 Heavy metal transport/detoxification protein domain containing
protein
Length = 81
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%)
Query: 29 NTVELKVRMDCDGCELKVRNTLANMKGVQSVEINRKQQKVTVQGMVDTQRVLRRAQSTGK 88
TV L+V M C+GC V+ L M+GV+S +++ K+QKVTV+G V VL+ TGK
Sbjct: 3 ETVVLRVGMSCEGCVGAVKRVLGKMQGVESFDVDIKEQKVTVKGNVTPDAVLQTVSKTGK 62
Query: 89 RTELWPYVP 97
+T W P
Sbjct: 63 KTSFWDAEP 71
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.131 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,077,074
Number of extensions: 142505
Number of successful extensions: 555
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 546
Number of HSP's successfully gapped: 12
Length of query: 150
Length of database: 17,035,801
Length adjustment: 92
Effective length of query: 58
Effective length of database: 12,232,113
Effective search space: 709462554
Effective search space used: 709462554
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 151 (62.8 bits)