BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0144100 Os08g0144100|AK071435
(196 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0144100 Similar to Avr9/Cf-9 rapidly elicited protein 31 334 3e-92
Os07g0681400 Similar to Calcium-binding protein CAST 278 1e-75
Os03g0331700 Similar to Avr9/Cf-9 rapidly elicited protein 31 254 3e-68
Os05g0312600 EF-Hand type domain containing protein 119 1e-27
Os04g0492800 Similar to Calmodulin (CaM) 99 2e-21
Os12g0228800 Similar to Calmodulin-like protein 91 5e-19
Os01g0949500 Similar to Calmodulin (CaM) 79 3e-15
Os05g0380900 Similar to Polcalcin Jun o 2 (Calcium-binding ... 66 2e-11
Os11g0143800 64 7e-11
>Os08g0144100 Similar to Avr9/Cf-9 rapidly elicited protein 31
Length = 196
Score = 334 bits (856), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 174/196 (88%), Positives = 174/196 (88%)
Query: 1 MDAKQSVAAAKPSLAKKTASASFRLRNGSLNAVRLRRVFDLFDRNGDGEITVDELAQALD 60
MDAKQSVAAAKPSLAKKTASASFRLRNGSLNAVRLRRVFDLFDRNGDGEITVDELAQALD
Sbjct: 1 MDAKQSVAAAKPSLAKKTASASFRLRNGSLNAVRLRRVFDLFDRNGDGEITVDELAQALD 60
Query: 61 ALGLVADRDGLAATVSAYVPEGAAGLRFEDFDALHRALGDALFGSLDXXXXXXXXXXXXX 120
ALGLVADRDGLAATVSAYVPEGAAGLRFEDFDALHRALGDALFGSLD
Sbjct: 61 ALGLVADRDGLAATVSAYVPEGAAGLRFEDFDALHRALGDALFGSLDGAAAAGEPGGGGG 120
Query: 121 XXXXXXXXXFKVFDVDGDGFISASELQEVLKKLGLPEAGSLATVREMICNVDRNSDGRVD 180
FKVFDVDGDGFISASELQEVLKKLGLPEAGSLATVREMICNVDRNSDGRVD
Sbjct: 121 DEEEEMREAFKVFDVDGDGFISASELQEVLKKLGLPEAGSLATVREMICNVDRNSDGRVD 180
Query: 181 FGEFKSMMQGITVWGP 196
FGEFKSMMQGITVWGP
Sbjct: 181 FGEFKSMMQGITVWGP 196
>Os07g0681400 Similar to Calcium-binding protein CAST
Length = 197
Score = 278 bits (712), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 149/190 (78%), Positives = 157/190 (82%), Gaps = 5/190 (2%)
Query: 6 SVAAAKPSLAKKTASASFRLRNGSLNAVRLRRVFDLFDRNGDGEITVDELAQALDALGLV 65
SVAA +PSL K S SFRLRNGSLNAVRLRRVFDLFDRNGDGEITVDELAQALDALGL
Sbjct: 12 SVAAVRPSLGK-APSPSFRLRNGSLNAVRLRRVFDLFDRNGDGEITVDELAQALDALGLE 70
Query: 66 ADRDGLAATVSAYVPEGAAGLRFEDFDALHRALGDALFGSLDXXXXXXXXXXXXXXXXXX 125
ADR GLAATV A+VP+GAAGLRFEDF++LHRALGDALFGSLD
Sbjct: 71 ADRAGLAATVGAHVPDGAAGLRFEDFESLHRALGDALFGSLD----VPEDGGGGGGGDEE 126
Query: 126 XXXXFKVFDVDGDGFISASELQEVLKKLGLPEAGSLATVREMICNVDRNSDGRVDFGEFK 185
FKVFDVDGDGFISASELQEVLKKLG+PEAGSLA VREMICNVDR+SDGRVDFGEFK
Sbjct: 127 MKEAFKVFDVDGDGFISASELQEVLKKLGMPEAGSLANVREMICNVDRDSDGRVDFGEFK 186
Query: 186 SMMQGITVWG 195
MMQGITV+G
Sbjct: 187 CMMQGITVFG 196
>Os03g0331700 Similar to Avr9/Cf-9 rapidly elicited protein 31
Length = 197
Score = 254 bits (649), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 134/187 (71%), Positives = 148/187 (79%), Gaps = 4/187 (2%)
Query: 9 AAKPSLAKKTASASFRLRNGSLNAVRLRRVFDLFDRNGDGEITVDELAQALDALGLVADR 68
AAKPSL++K S SFRLRNGSLNA+RLRRVFDLFDRNGDGEIT+DE+A ALDALGL ADR
Sbjct: 14 AAKPSLSRKP-SPSFRLRNGSLNALRLRRVFDLFDRNGDGEITLDEMASALDALGLGADR 72
Query: 69 DGLAATVSAYVPEGAAGLRFEDFDALHRALGDALFGSLDXXXXXXXXXXXXXXXXXXXXX 128
GL ATV Y+P GAAGLRF DF+ALHRALGDALFG ++
Sbjct: 73 AGLEATVGGYIPAGAAGLRFGDFEALHRALGDALFGPVE---EEEPGKQGEDDDEGDMKE 129
Query: 129 XFKVFDVDGDGFISASELQEVLKKLGLPEAGSLATVREMICNVDRNSDGRVDFGEFKSMM 188
F+VFD DGDGFISA+ELQ VLKKLGLPEA +LATV+EMICNVDR+ DGRVDFGEFK MM
Sbjct: 130 AFRVFDEDGDGFISAAELQAVLKKLGLPEARNLATVQEMICNVDRDCDGRVDFGEFKCMM 189
Query: 189 QGITVWG 195
QGITVWG
Sbjct: 190 QGITVWG 196
>Os05g0312600 EF-Hand type domain containing protein
Length = 197
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 102/179 (56%), Gaps = 13/179 (7%)
Query: 14 LAKKTASASFRLRNGSLNAVRLRRVFDLFDRNGDGEITVDELAQALDALGLVADRDGLAA 73
+ + A+ R R +L RLRRVF++FDR+GDG IT EL+ AL LG + AA
Sbjct: 24 VVQPQRQAAHRRRAETL---RLRRVFEMFDRDGDGVITPAELSGALCRLGARGEAPPAAA 80
Query: 74 TVSA----YVPEGAAGLRFEDFDALHRALGDALFGSLDXXXXXXXXXXXXXXXXXXXXXX 129
+ A Y+ G AGLRF +F+ALH L L G
Sbjct: 81 ALDAVVAAYIAPGMAGLRFAEFEALHAELA-GLGGR-----QAVAAAEAEEEKEADMREA 134
Query: 130 FKVFDVDGDGFISASELQEVLKKLGLPEAGSLATVREMICNVDRNSDGRVDFGEFKSMM 188
F VFD DGDG+ISA+ELQ VL ++GLPEA +A VR+MI DR+SDGRVD+ EFK+MM
Sbjct: 135 FGVFDEDGDGYISAAELQAVLSRMGLPEAACMARVRDMIAAADRDSDGRVDYEEFKAMM 193
>Os04g0492800 Similar to Calmodulin (CaM)
Length = 250
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 84/160 (52%), Gaps = 5/160 (3%)
Query: 31 NAVRLRRVFDLFDRNGDGEITVDELAQALDALGLVADRDGLAATVSAYVPEGAAGLRFED 90
+A L RVF+LFDRNGDG IT +EL +L LG+ D LAA ++ G + E+
Sbjct: 89 DAAELARVFELFDRNGDGRITREELEDSLGKLGIPVPADELAAVIARIDANGDGCVDVEE 148
Query: 91 FDALHRALGDALFGSLDXXXXXXXXXXXXXXXXXXXXXXFKVFDVDGDGFISASELQEVL 150
F L+R++ + G D F+VFD +GDG+I+ EL VL
Sbjct: 149 FGELYRSI---MAGGDDSKDGRAKEEEEEEDGDMREA--FRVFDANGDGYITVDELGAVL 203
Query: 151 KKLGLPEAGSLATVREMICNVDRNSDGRVDFGEFKSMMQG 190
LGL + + R MI VDR+ DGRVDF EF MM+G
Sbjct: 204 ASLGLKQGRTAEECRRMIGQVDRDGDGRVDFHEFLQMMRG 243
>Os12g0228800 Similar to Calmodulin-like protein
Length = 168
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 78/159 (49%), Gaps = 3/159 (1%)
Query: 35 LRRVFDLFDRNGDGEITVDELAQALDALGLVADRDGLAATVSAYVPEGAAGLRFEDFDAL 94
LR+VF +FD+NGDG IT EL ++ G+ D L AT+ G + E+F L
Sbjct: 2 LRKVFKMFDKNGDGRITKKELGESFKNFGIFIPDDELDATMDKIDANGDGCVDVEEFGLL 61
Query: 95 HRA-LGDALFGSLDXXXXXXXXXXXXX--XXXXXXXXXFKVFDVDGDGFISASELQEVLK 151
+R+ LGD G F VFD +GDGFI+ EL+ VL
Sbjct: 62 YRSILGDDAAGRAPRTAAAAIGGEGGAPDDEDEGMREAFNVFDQNGDGFITVDELRSVLS 121
Query: 152 KLGLPEAGSLATVREMICNVDRNSDGRVDFGEFKSMMQG 190
LGL + R MI VD + DGRVDF EFK MM+G
Sbjct: 122 SLGLKHGRTADDCRRMISMVDADGDGRVDFKEFKQMMRG 160
>Os01g0949500 Similar to Calmodulin (CaM)
Length = 185
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 77/157 (49%), Gaps = 21/157 (13%)
Query: 35 LRRVFDLFDRNGDGEITVDELAQALDALGLVADRDGLAATVSAYVPEGAAGLRFEDFDAL 94
+ RVF FD NGDG I+ EL ++LG A D LA ++ +G + ++F AL
Sbjct: 41 MERVFRKFDANGDGRISRSELGALFESLGHAATDDELARMMAEADADGDGFISLDEFAAL 100
Query: 95 H-RALGDALFGSLDXXXXXXXXXXXXXXXXXXXXXXFKVFDVDGDGFISASELQEVLKKL 153
+ A GDA D F+VFD DG+G ISA+EL VL L
Sbjct: 101 NATASGDAAAVEED------------------LRHAFRVFDADGNGTISAAELARVLHGL 142
Query: 154 GLPEAGSLATVREMICNVDRNSDGRVDFGEFKSMMQG 190
G E ++ R MI VD+N DG + F EFK MM G
Sbjct: 143 G--EKATVQQCRRMIEGVDQNGDGLISFEEFKVMMAG 177
>Os05g0380900 Similar to Polcalcin Jun o 2 (Calcium-binding pollen allergen Jun o
2)
Length = 201
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 68/152 (44%), Gaps = 19/152 (12%)
Query: 37 RVFDLFDRNGDGEITVDELAQALDALGLVADRDGLAATVSAYVPEGAAGLRFEDFDALHR 96
RVF FD NGDG I+ ELA ++G D +A + +G + +F A+
Sbjct: 58 RVFRKFDANGDGRISRAELAALFRSVGHAVTDDEVARMMQEADSDGDGYISLGEFAAI-- 115
Query: 97 ALGDALFGSLDXXXXXXXXXXXXXXXXXXXXXXFKVFDVDGDGFISASELQEVLKKLGLP 156
F VFD DG+G I+ +EL VL+ +G
Sbjct: 116 ---------------SAPPPGDAAAAEEDLRHAFGVFDADGNGVITPAELARVLRGIG-- 158
Query: 157 EAGSLATVREMICNVDRNSDGRVDFGEFKSMM 188
EA ++A R MI VDRN DG ++F EFK MM
Sbjct: 159 EAATVAQCRRMIDGVDRNGDGLINFEEFKLMM 190
>Os11g0143800
Length = 146
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 39/63 (61%)
Query: 130 FKVFDVDGDGFISASELQEVLKKLGLPEAGSLATVREMICNVDRNSDGRVDFGEFKSMMQ 189
F VFD DGDGFIS ELQ V+++LGL M+ DR+ DG ++F EFK MMQ
Sbjct: 84 FSVFDGDGDGFISPLELQNVMRRLGLQHDAGHEECERMLKVFDRDGDGMINFDEFKVMMQ 143
Query: 190 GIT 192
G+
Sbjct: 144 GVV 146
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.136 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,529,005
Number of extensions: 198630
Number of successful extensions: 1147
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 1176
Number of HSP's successfully gapped: 13
Length of query: 196
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 100
Effective length of database: 12,023,257
Effective search space: 1202325700
Effective search space used: 1202325700
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 153 (63.5 bits)