BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0591300 Os07g0591300|Os07g0591300
(211 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0591300 Galactose oxidase, central domain containing p... 373 e-104
Os08g0363000 Protein of unknown function DUF295 family protein 113 1e-25
Os11g0549665 Conserved hypothetical protein 106 1e-23
Os08g0344900 104 4e-23
Os03g0113200 Protein of unknown function DUF295 family protein 97 9e-21
Os03g0792200 91 8e-19
Os01g0374400 90 1e-18
Os04g0486300 Protein of unknown function DUF295 family protein 84 6e-17
Os07g0530400 Conserved hypothetical protein 77 9e-15
Os08g0285100 Conserved hypothetical protein 74 5e-14
Os07g0177000 Conserved hypothetical protein 74 9e-14
Os11g0231400 Protein of unknown function DUF295 family protein 71 4e-13
>Os07g0591300 Galactose oxidase, central domain containing protein
Length = 211
Score = 373 bits (958), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/186 (100%), Positives = 186/186 (100%)
Query: 26 HLVTTSPAAQVGGWASLPTDLTRLVAGRVLAGDVVDYIAFRAVCSGWRACAPSPRDPTLR 85
HLVTTSPAAQVGGWASLPTDLTRLVAGRVLAGDVVDYIAFRAVCSGWRACAPSPRDPTLR
Sbjct: 26 HLVTTSPAAQVGGWASLPTDLTRLVAGRVLAGDVVDYIAFRAVCSGWRACAPSPRDPTLR 85
Query: 86 KHLLRPRAWVALCDGDAARPDDACEITFFHTRTARSLRVRLPELRCHRIVGFTDGLIILL 145
KHLLRPRAWVALCDGDAARPDDACEITFFHTRTARSLRVRLPELRCHRIVGFTDGLIILL
Sbjct: 86 KHLLRPRAWVALCDGDAARPDDACEITFFHTRTARSLRVRLPELRCHRIVGFTDGLIILL 145
Query: 146 HKRTTAVRVLNPFTGVAVDLPPLAPVFHQVVKNRNSLLYMLHQRHVSDDPHCRHRLVPLH 205
HKRTTAVRVLNPFTGVAVDLPPLAPVFHQVVKNRNSLLYMLHQRHVSDDPHCRHRLVPLH
Sbjct: 146 HKRTTAVRVLNPFTGVAVDLPPLAPVFHQVVKNRNSLLYMLHQRHVSDDPHCRHRLVPLH 205
Query: 206 GWSARL 211
GWSARL
Sbjct: 206 GWSARL 211
>Os08g0363000 Protein of unknown function DUF295 family protein
Length = 426
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 81/143 (56%), Gaps = 3/143 (2%)
Query: 29 TTSPAAQVGGWASLPTDLTRLVAGRVLAGDVVDYIAFRAVCSGWRACAPSPRDPTLRKHL 88
TT A WASL DL L+ RVLAGDV DYI FRA C WR+C SP +
Sbjct: 18 TTHAARDSSSWASLAEDLVSLIGWRVLAGDVRDYICFRAACHHWRSCTASPCGRGVVDPR 77
Query: 89 LRPRAWVALCDGDAARPDDAC---EITFFHTRTARSLRVRLPELRCHRIVGFTDGLIILL 145
PR W+ L +G+ P + FF+ T +R++LP +R HRI+ DG+++L
Sbjct: 78 FHPRRWMMLPEGNGLYPGHGMLRGFVRFFNLSTGAFVRLKLPIVRDHRILDSVDGILLLQ 137
Query: 146 HKRTTAVRVLNPFTGVAVDLPPL 168
R TAVR+L+PFTG VD PPL
Sbjct: 138 RNRDTAVRLLHPFTGDIVDFPPL 160
>Os11g0549665 Conserved hypothetical protein
Length = 446
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 80/141 (56%), Gaps = 4/141 (2%)
Query: 39 WASLPTDLTRLVAGRVLAGDVV-DYIAFRAVCSGWRACAPSPRDPTLRKHLLRPRAWVAL 97
WASL DL L+ GRVLAGD + DY+ FRAVCS W A P + PR W+ L
Sbjct: 24 WASLDQDLVGLIGGRVLAGDDMRDYVRFRAVCSHWSASTVRPLGRGVTDRRFHPRRWMML 83
Query: 98 CDGDA---ARPDDACEITFFHTRTARSLRVRLPELRCHRIVGFTDGLIILLHKRTTAVRV 154
+G PD + FF+ TA +RV LP LR H I+ DGL++L TA+R+
Sbjct: 84 PEGHGLYPGHPDLRGYVRFFNLSTAALVRVHLPLLRDHVIIDSVDGLLLLHRDHDTAIRL 143
Query: 155 LNPFTGVAVDLPPLAPVFHQV 175
L+PFTG DLPPLA + Q+
Sbjct: 144 LHPFTGDVADLPPLASLLPQM 164
>Os08g0344900
Length = 397
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 79/144 (54%), Gaps = 4/144 (2%)
Query: 29 TTSPAAQVGGWASLPTDLTRLVAGRVLAGDVVDYIAFRAVCSGWRACAPSPRDPTLRKHL 88
TT WASL DL L+ RVLAGDV DYI FRA C WR+C SP +
Sbjct: 18 TTHAGRDSSSWASLAEDLVSLIGWRVLAGDVRDYICFRAACHHWRSCTASPCGRGVVVPR 77
Query: 89 LRPRAWVALCDGDAARPDDA---CEITFFHTRTARSLRVRLPELR-CHRIVGFTDGLIIL 144
PR W+ L +G+ P + FF+ T +R+RLP R HRI+ DG+++L
Sbjct: 78 FHPRRWMMLPEGNGLYPGHGKLRGFVRFFNLSTGAFVRLRLPIARDDHRILDSVDGILLL 137
Query: 145 LHKRTTAVRVLNPFTGVAVDLPPL 168
R TAVR+L+PFTG VD PPL
Sbjct: 138 QRNRDTAVRLLHPFTGDIVDFPPL 161
>Os03g0113200 Protein of unknown function DUF295 family protein
Length = 440
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 77/142 (54%), Gaps = 5/142 (3%)
Query: 39 WASLPTDLTRLVAGRVLAGD--VVDYIAFRAVCSGWRACAPSPRDPTLRKHLLRPRAWVA 96
W SL DL L+A RVLAGD ++DY+ FRAVC WR+ PR + PR W+
Sbjct: 32 WESLHEDLLELIAWRVLAGDGDLLDYVRFRAVCPHWRSSTSCPRGRGIVDRRFHPRRWML 91
Query: 97 LCDGDAARPDDA---CEITFFHTRTARSLRVRLPELRCHRIVGFTDGLIILLHKRTTAVR 153
L +G P + FF+ T +RV LP R H ++ DG+++L TA+R
Sbjct: 92 LPEGHGLYPGHGKLRGFVRFFNLSTGAFVRVHLPLFRDHCVLDSVDGILLLQRDHDTAIR 151
Query: 154 VLNPFTGVAVDLPPLAPVFHQV 175
+L+PFTG +DLPPL + V
Sbjct: 152 LLHPFTGDILDLPPLETLLRYV 173
>Os03g0792200
Length = 394
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 74/137 (54%), Gaps = 7/137 (5%)
Query: 39 WASLPTDLTRLVAGRVLAGDVVDYIAFRAVCSGWRACAPSPRDPTLRKHLLRPRAWVALC 98
W +L L+A RVLAGDV DY+ FRAVC+ WR C+ PR+ PR W L
Sbjct: 127 WYNLTDGPAGLIAERVLAGDVADYMRFRAVCTAWRQCSADPREHNSLDSRFHPRRWFMLR 186
Query: 99 DGDAARPDDAC--EITFFHTRTARSLRVRLPELRCHRIVGFT-DGLIILLHKRTTAVRVL 155
+ P+ A F + T + + V LPE+ HR G T +GL++L+ RT VRVL
Sbjct: 187 EW----PERAAPHRRRFINAATGQCVAVDLPEIEGHRSFGPTAEGLLVLVDDRTLFVRVL 242
Query: 156 NPFTGVAVDLPPLAPVF 172
NPFT +LP LA +
Sbjct: 243 NPFTRRLTELPSLATLL 259
>Os01g0374400
Length = 450
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 76/152 (50%), Gaps = 5/152 (3%)
Query: 39 WASLPTDLTRLVAGRVLAGDVVDYIAFRAVCSGWRACAPSPRDPTLRKHLLRPRAWVALC 98
WASL D+ RLVA LAGDV DY+ RAVC WR+ SPR ++ PR W+
Sbjct: 44 WASLDGDIIRLVAEHALAGDVADYLRLRAVCRHWRSSTVSPRGRSVVDPRFHPRRWILFP 103
Query: 99 DGDAARPDDA---CEITFFHTRTARSLRVRLPELRCHRIVGFTDGLIILLHKRTTAVRVL 155
+ P + FF+ T R+ LP H ++ DGL++L R +A+R+L
Sbjct: 104 ESHGLFPGHRKLHGRVRFFNVSTGAFARLLLPFFPDHFVIDSVDGLLLLQRDRDSAIRIL 163
Query: 156 NPFTGVAVDLPPLAPVFHQV--VKNRNSLLYM 185
+PFTG V+L L + QV L YM
Sbjct: 164 HPFTGDIVELSSLETLRPQVEPFFTSTELAYM 195
>Os04g0486300 Protein of unknown function DUF295 family protein
Length = 424
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 78/143 (54%), Gaps = 9/143 (6%)
Query: 39 WASLPTDLTRLVAGRVLAG-DVVDYIAFRAVCSGWRACAPSPRDPTLRKHLLRPRAWVAL 97
WASLP DL LVA R+LAG D++DY+ FRAVC+ WR+ SPR + PR W+ L
Sbjct: 27 WASLPEDLVDLVASRLLAGGDLLDYVRFRAVCTSWRSGTASPRGRGVADRRFHPRRWMML 86
Query: 98 CDGDAARPDDAC---EITFFHTRTARSLRVRLPELRCHRI-VGFTDGLIILLH----KRT 149
+G P F + T +R R+P LR + + DGL++LL +
Sbjct: 87 PEGHGLYPGHPSLRGYARFLNLDTGTLVRARIPLLRDGYVAIDSVDGLLLLLLDPDPNQE 146
Query: 150 TAVRVLNPFTGVAVDLPPLAPVF 172
AVR+L+PFTG +LPPL V
Sbjct: 147 GAVRLLHPFTGDTAELPPLGTVL 169
>Os07g0530400 Conserved hypothetical protein
Length = 418
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 80/154 (51%), Gaps = 8/154 (5%)
Query: 39 WASLPTDLTRLVAGRVLAGDVVDYIAFRAVCSGWRACAPSPR-DPTLRKHLLRPRAWVAL 97
W++L L L+A R+LA DV DYI FRAVCS WR PR LR L PR+W+ L
Sbjct: 5 WSTLTGCLVMLIAERLLANDVTDYIRFRAVCSPWRQHTEDPRVGDGLRPKYL-PRSWIML 63
Query: 98 CDG-DAARPDDACEITFFHTRTARSLRVRLPELRCHRIVGFTDGLIILLHKRTTA--VRV 154
+ AA P +T T L V +PEL+ H ++G T G ++ L +R A +R+
Sbjct: 64 EETPPAAAP---FRNRLLNTGTGAVLAVDVPELKDHDVMGPTLGGLLTLRERGGAHVLRL 120
Query: 155 LNPFTGVAVDLPPLAPVFHQVVKNRNSLLYMLHQ 188
L+PFT +LP L + H + + HQ
Sbjct: 121 LHPFTRHLTELPSLVTMIHAASHDPKMVEPEYHQ 154
>Os08g0285100 Conserved hypothetical protein
Length = 499
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Query: 39 WASLPTDLTRLVAGRVLAGDVVDYIAFRAVCSGWRACAPSPRDPTLRKHLLRPRAWVALC 98
WA+L ++ +AGR+LA DV +YI FRAVC WR PR L RPR W L
Sbjct: 64 WANLLAEMVGEIAGRLLAVDVAEYIRFRAVCGPWRERTADPRVRRLDAR-FRPRNWAVLT 122
Query: 99 DGDAARPDDACEITFFHTRTARSLRVRLPELRCHRIVGFTDGLIILLHKRTTAVRVLNPF 158
+ TA S+ V LP L H + DGL++L +K T + +L+P
Sbjct: 123 ITPPPPRRLPPRRRLLNLATAASIGVVLPALSTHCHLCAADGLLVLFNKATNLISLLDPL 182
Query: 159 TGVAVDLPPL 168
T D P +
Sbjct: 183 TNTITDFPAI 192
>Os07g0177000 Conserved hypothetical protein
Length = 788
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 71/137 (51%), Gaps = 9/137 (6%)
Query: 33 AAQVGG--WASLPTDLTRLVAGRVLAGDVVDYIAFRAVCSGWRACAPSPRDPTLRKHLLR 90
A Q GG WA LP +L L+A G DY+ FRAVCS WRA APSPR + L
Sbjct: 2 AEQGGGVCWAYLPAELAELIAAGGGGGSSTDYVRFRAVCSPWRAAAPSPRGRGVLDPRLH 61
Query: 91 PRA-WVALCDGDAARPDD---ACEITFFH---TRTARSLRVRLPELRCHRIVGFTDGLII 143
P A W+ +G P A F + A +RV LP LR H ++ DGL++
Sbjct: 62 PGARWMMFPEGFGRFPGHRALAGHARFLDLSASAAAALIRVPLPFLRDHCVLDSPDGLLL 121
Query: 144 LLHKRTTAVRVLNPFTG 160
L TA+R+L+PFTG
Sbjct: 122 LQRDGDTAIRLLHPFTG 138
>Os11g0231400 Protein of unknown function DUF295 family protein
Length = 372
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 53 RVLAGDVVDYIAFRAVCSGWRACAPSPRDPTLRKHLLRPRAWVALCDGDAARPDDACEIT 112
RV AGD DYI FRAVC WR+ PR L + R +
Sbjct: 1 RVAAGDFRDYIHFRAVCPQWRSATTCPRRRGLHPGHGKLRG----------------HVR 44
Query: 113 FFHTRTARSLRVRLPELRCHRIVGFTDGLIILLHKRTTAVRVLNPFTGVAVDLPPLAPVF 172
FH T +RVRLP R H I+ DG+++L TA+R+L+PFTG +LPPL +
Sbjct: 45 SFHLSTGAIVRVRLPHFRDHCILYSADGVLLLQRDHDTAIRLLHPFTGDTAELPPLETLL 104
Query: 173 HQV 175
+V
Sbjct: 105 PRV 107
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.328 0.140 0.465
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,564,285
Number of extensions: 326484
Number of successful extensions: 1162
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 1155
Number of HSP's successfully gapped: 13
Length of query: 211
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 115
Effective length of database: 12,023,257
Effective search space: 1382674555
Effective search space used: 1382674555
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 154 (63.9 bits)